| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is ppe24 [H]
Identifier: 148661726
GI number: 148661726
Start: 2177581
End: 2180544
Strand: Reverse
Name: ppe24 [H]
Synonym: MRA_1929
Alternate gene names: 148661726
Gene position: 2180544-2177581 (Counterclockwise)
Preceding gene: 148661727
Following gene: 148661725
Centisome position: 49.33
GC content: 60.46
Gene sequence:
>2964_bases ATGCATTACTCAGTGTTGCCGCCGGAGATCAACTCGGCCTTGATCTTCGCCGGGGCGGGCTCCGGACCGATGCTGGCGGC GGCGTCGGCCTGGGACGGGCTGGCAACCGAATTAGCCTCGGCTGCTGTCTCTTTCGGCTCGGTGACAGCCGGGCTGGTCG GCGGGTCGTGGCAGGGTCGGTCATCGGTGGCGATGGCAGCGGCGGCAGCCCCGTATGCGGGGTGGCTGGCCGCGGCGGCG ACCCAGGCCGAGCAGGCGGCCACCCAGGCCCAGGTGATGGTGGCCGAGTTCGAGGCTGTGCGGCTGGCGATGGTACAACC GGCGCTGGTGGCCGCCAACCGTTCCGGCCTCATATCGCTGGTGATATCGAACCTTTTTGGTCAAAACGCTCCCGCGATCG CGGCCGCCGAAGCCGCATACGAGGAGATGTGGGCTCTGGATGTATCGGCGATGGCGGCCTACCATTCCGGGGCGTCGGCG GTCGCTGTGGCGCTACCGGCATTCGCCCTCCCGCTGCGGCTTCCGGCGGGTCTGGCGGCCGGGCCCGCGGCCGTGGTGAC CGCGCTCACCACGGCCGTGGGCATGCCGACTTTTGCCGGCCGGGCGATCGCCGCTAGCCTCGGCTTGGCCAACGTCGGTG GTGGCAACCTCGGCAATGCCAACAATGGGCTCGGCAACATCGGCAACGCCAACCTTGGCAACAACAATCTGGGGTCCGGC AACTTCGGTAGCTTCAATATCGGCTCGGCCAACCTAGGTGGCAACAACATCGGCATAGGAAACGCGGGCGCCAACAACTT CGGACTTGCAAACCTGGGCAATTTGAACACGGGATTCGCCAATGCAGGCATCGGCAACTTCGGAATTGCGAACACCGGCA ACAACAATATCGGCAACGGCCTGACTGGAAACAACCAAATCGGCATTGGCGGACTCAATTCCGGCAACGGTAACGTCGGA TTATTCAACGCGGGTAGCGCCAATATCGGTTTCTTCAACTCCGGCAATGGCAACTTTGGCATCGGGAACTCCGGTAACTT CAGCACTGGCCTGTTCAACCCCGGACACGGCAACACCGGATTCCTGAATGCGGGCTCTTTCAATACGGGCATGTTCGACG TTGGGAACGCGAACACCGGCAGCTTCAACGTCGGCCACTACAACTTCGGTGCCTTCAACCCGGGCCCGTCGAACACGGGT ACCTTCAACACGGGCGGCGCCAACACCGGCTGGTTCAACACAGGAAGCATCAACACCGGCGCCTTCAACATAGGCGACAT GAATAACGGCTTGTTCAACACGGGCGACATGAACAATGGTGTCTTTTACCGTGGTGTGGGCCAAGGCAGCCTGCAGTTCG CCATCACCAGCCCTGATTTGACGCTTCCGTCTCTGGAAATACCCGGAATCTCGGTTCCCGCGTTCAGCCTGCCCGCGATA ACCTTGCCGTCGTTGACGATTCCGGCGGTGACGACGCCGGCCAACGTTACCGTGGGTGCGTTTGATTTGCCGGGGTTGAC GGTGCCGTCGTTGACGATTCCAGCGGCGATGACGCCAGCTAACATCACGGTGGGTGCGTTTGATTTGCCGGGGTTGACGG TGCCGTCGTTGACGATTCCAGCTACAACGACACCAGCCAACATCACGGTAGGTGCGTTTAACTTGCCTCAGTTGAGTATT CCGTCGGTGACGGTTCCGCCGATCACGATTCCGGCTGGCACAGCGCTAGGTGCGTTCAATCTGCCGACGCTGAGTATTCC GTCGGTGACGGTTCCGCCGATCACGATTCCGGCTGGCACCACTGTCGGCGGATTTACGCTACCCACGATACACACCCCGT TAATAAGTACACCCCAAATAAGTATAGGCGGCTTTAGCACTCCCGGCATAGCCACGCAAGCAAATTCTGGTGTCATCAAT CTTCCCACCTTTAGCCTTAACGGCATTACGATAACTAATTTGGTGGTGTTCATTCCGAACAACATCACTGCCTTGCAAAC CAATATGCCCGGGGTATTCCCGCAGATTGGCGGCTTCGCTAATACACCTCCTGCCTTTATTAATACTGGGACCATTACCG TGGGTGGAGGTCAAATCAACGGCGTCGGCTTCTCGATCGGCGCAATCAACGTCACCCCCTTCACCCTCCCCAACGTCGTC ATCCAACCGTGGTCCCTCGGGGGGATCTCGGTCGACGGGTTCACCCTGCCAGAGATCAGCACCCAAGAATTCACCACTCC GGCGTTGACGATCAGTCCGATTGGTGTCGGTGCATTGAGCCTGCCGGATATCACTACTCAACAGTTCACGACCCCGGAGT TGACCATCGACCCGATCACGCTGGGTGGGTTTACGCTGCCGCAGCTCAGCATCCCGGCGATTACCACCCCGGCGTTCACG ATCGATCCGATAGCGCTGGGTGGTTTCACGCTTCCTCAGATCATGACGCCCGAGATAACGACTCCACCGTTCGCCATCGA CCCGATCGGACTTAGCGGTTTCACCCTCCCCCAGGTCAATATCCCGGAGATCACCACGCCAGAGTTCACCATCCAGCCGG TGGGCTTGGCGGCCTTCACCACACCCGCACTCACCATCGCCAGCATCCACCTGCCGAGCACCACCATGGGCGGATTCGCA ATCCCAGCGGGGCCGGGATACTTCAACTCGAGCGCAACGCCCTCGTTGGGCTTTTTCAACGCCGGAATCGGTGGGAACTC GGGCTTCGGCAACAGCGGCTCGGGACTGTCGGGTTGGTTCAACACAAGTCCTGTTGGGCTGCTAGCCGGCTCGGGCTACC AGAACTACGGTGGTCTTATCTCCGGCTTCTCCAACCTTGGCAGCGGCATATCGGGCTTCGCCAACACCGGCACCCTGCCG TTTGCCGTGACCAGCTTGGTCTCCGGTTTGGCCAACATCGGCAACAACCTGTCGGGCCTGTTCTTCCAGAGCACCACGCC ATAA
Upstream 100 bases:
>100_bases TTCAAGATCTCCGCGTACTCTCATGCGCTACGAACGAGTCAGCGACGACGGGCGTGTGACCTTTCATCAGCACCAGGCTC ACCCCGGAAGGTGGGGAGCG
Downstream 100 bases:
>100_bases TCCGTGCGGACCCCGCCCCGCGGAGAGGATCACCAGCCGTAATCGCCACGATCAGATCAACGACGCCTGCGACGACCTCC ACAACGATGAAATCATCGGG
Product: PPE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 987; Mature: 987
Protein sequence:
>987_residues MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVAMAAAAAPYAGWLAAAA TQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASA VAVALPAFALPLRLPAGLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGNNQIGIGGLNSGNGNVG LFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTG TFNTGGANTGWFNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSI PSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVIN LPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPAFT IDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFA IPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP FAVTSLVSGLANIGNNLSGLFFQSTTP
Sequences:
>Translated_987_residues MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVAMAAAAAPYAGWLAAAA TQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASA VAVALPAFALPLRLPAGLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGNNQIGIGGLNSGNGNVG LFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTG TFNTGGANTGWFNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSI PSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVIN LPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPAFT IDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFA IPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP FAVTSLVSGLANIGNNLSGLFFQSTTP >Mature_987_residues MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGRSSVAMAAAAAPYAGWLAAAA TQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISLVISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASA VAVALPAFALPLRLPAGLAAGPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNGLTGNNQIGIGGLNSGNGNVG LFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTG TFNTGGANTGWFNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIPATTTPANITVGAFNLPQLSI PSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGTTVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVIN LPTFSLNGITITNLVVFIPNNITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPITLGGFTLPQLSIPAITTPAFT IDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVNIPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFA IPAGPGYFNSSATPSLGFFNAGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP FAVTSLVSGLANIGNNLSGLFFQSTTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002989 - InterPro: IPR000030 [H]
Pfam domain/function: PF01469 Pentapeptide_2; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 97951; Mature: 97951
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR CCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL CCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCEEEECCCCCHHHH VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCC GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG CHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG CCCCEECCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG CCCCCEEEECCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG EEECCCCCCCEEECCCCCCCCEECCEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI EEECCCCCCCCEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCE TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP ECCCEEECEECCCCCEEEEEEECCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCCEEEC ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT CCCCCCEEEEEEECCCCCCCCCEECCCEEECCCCCCCCCCCCCCCCCCEECCCEEECCCC TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN CCCCEECCCCCCCCCCCCEEEECCCCCCCCEEECCCCEEECCEEEECCEEEEEEEEECCC NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV CEEEEECCCCCCCHHHCCCCCCCCCEEECCEEEECCCEECCEEEEEEEEEECCEECCCEE IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT EECCCCCCEEECCEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEE LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN ECCEECCCCCCCEECCCCEEECCEEECCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCC IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN CCCCCCCCEEEEECCEEEECCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEE AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH FAVTSLVSGLANIGNNLSGLFFQSTTP HHHHHHHHHHHHHCCCCCEEEEECCCC >Mature Secondary Structure MHYSVLPPEINSALIFAGAGSGPMLAAASAWDGLATELASAAVSFGSVTAGLVGGSWQGR CCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC SSVAMAAAAAPYAGWLAAAATQAEQAATQAQVMVAEFEAVRLAMVQPALVAANRSGLISL CCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCEEEECCCCCHHHH VISNLFGQNAPAIAAAEAAYEEMWALDVSAMAAYHSGASAVAVALPAFALPLRLPAGLAA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCC GPAAVVTALTTAVGMPTFAGRAIAASLGLANVGGGNLGNANNGLGNIGNANLGNNNLGSG CHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NFGSFNIGSANLGGNNIGIGNAGANNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGNG CCCCEECCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTGNNQIGIGGLNSGNGNVGLFNAGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG CCCCCEEEECCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC FLNAGSFNTGMFDVGNANTGSFNVGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG EEECCCCCCCEEECCCCCCCCEECCEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC AFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFAITSPDLTLPSLEIPGISVPAFSLPAI EEECCCCCCCCEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCE TLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAAMTPANITVGAFDLPGLTVPSLTIP ECCCEEECEECCCCCEEEEEEECCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCCEEEC ATTTPANITVGAFNLPQLSIPSVTVPPITIPAGTALGAFNLPTLSIPSVTVPPITIPAGT CCCCCCEEEEEEECCCCCCCCCEECCCEEECCCCCCCCCCCCCCCCCCEECCCEEECCCC TVGGFTLPTIHTPLISTPQISIGGFSTPGIATQANSGVINLPTFSLNGITITNLVVFIPN CCCCEECCCCCCCCCCCCEEEECCCCCCCCEEECCCCEEECCEEEECCEEEEEEEEECCC NITALQTNMPGVFPQIGGFANTPPAFINTGTITVGGGQINGVGFSIGAINVTPFTLPNVV CEEEEECCCCCCCHHHCCCCCCCCCEEECCEEEECCCEECCEEEEEEEEEECCEECCCEE IQPWSLGGISVDGFTLPEISTQEFTTPALTISPIGVGALSLPDITTQQFTTPELTIDPIT EECCCCCCEEECCEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEE LGGFTLPQLSIPAITTPAFTIDPIALGGFTLPQIMTPEITTPPFAIDPIGLSGFTLPQVN ECCEECCCCCCCEECCCCEEECCEEECCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCC IPEITTPEFTIQPVGLAAFTTPALTIASIHLPSTTMGGFAIPAGPGYFNSSATPSLGFFN CCCCCCCCEEEEECCEEEECCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEE AGIGGNSGFGNSGSGLSGWFNTSPVGLLAGSGYQNYGGLISGFSNLGSGISGFANTGTLP CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH FAVTSLVSGLANIGNNLSGLFFQSTTP HHHHHHHHHHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]