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The map label for this gene is yfdE [H]

Identifier: 148661672

GI number: 148661672

Start: 2122994

End: 2125408

Strand: Direct

Name: yfdE [H]

Synonym: MRA_1877

Alternate gene names: 148661672

Gene position: 2122994-2125408 (Clockwise)

Preceding gene: 148661668

Following gene: 148661673

Centisome position: 48.03

GC content: 66.63

Gene sequence:

>2415_bases
GTGCACGTGCCCGAACGATTGCTCGATGCCGTGCGTGTGCTCGACTTGTCCGACGGCTGTTCTGCTGGAGGCACCGATAT
GGTGACACGACTGCTCGCCGACCTGGGCGCAGACGTTCTCAAGGTGGAACCCCCCGGCGGCAGCCCAGGACGCCACGTGC
GGCCCACGCTGGCCGGCACCAGCATCGGGTTCGCCATGCACAACGCGAACAAACGCAGCGCAGTGCTCAACCCGCTCGAC
GAGAGCGACCGTCGGCGGTTCTTGGACCTCGCCGCCAGCGCCGACATCGTCGTCGACTGTGGTCTTCCGGGACAGGCCGC
CGCGTACGGGGCATCGTGTGCCGAGTTGGCCGATCGCTACCGACACCTGGTGGCGCTGTCGATCACCGACTTTGGCGCTG
CCGGTCCGCGGTCGTCATGGCGCGCGACCGATCCGGTGCTGTACGCGATGAGTGGTGCTCTCTCGCGGTCGGGCCCTACC
GCCGGCACGCCGGTACTGCCGCCGGACGGTATCGCTTCGGCAACCGCAGCGGTGCAGGCAGCCTGGGCCGTACTGGTCGC
CTATTTCAACCGATTACGTTGTGGTACTGGGGATTACATCGACTTCTCCCGGTTTGACGCCGTCGTTATGGCGTTGGATC
CCCCCTTCGGGGCGCACGGGCAGGTCGCAGCCGGCATCCGCAGCACCGGGCGATGGCGGGGACGGCCCAAGAACCAGGAC
GCTTACCCGATTTATCCGTGCCGGGACGGCTACGTACGGTTCTGCGTGATGGCGCCGCGGCAGTGGCGCGGGCTGCGCCG
CTGGTTGGGGGAGCCCGAAGATTTTCAGGACCCCAAGTACGACGTGATCGGCGCACGTTTGGCCGCATGGCCGCAGATCA
GCGTGTTGGTCGCGAAGTTGTGCGCCGAGAAGACCATGAAGGAGTTGGTGGCAGCCGGCCAAGCGCTCGGGGTTCCCATT
ACCGCGGTGCTGACACCGTCGAGAATCCTGGCCTCCGAACACTTCCAGGCGGTGGGTGCGATCACCGATGCCGAGCTCGT
TCCGGGGGTGCGCACCGGGGTGCCTACCGGATACTTCGTTGTCGACGGGAAGCGCGCCGGTTTCCGTACTCCGGCCCCCG
CCGCGGGGCAGGACGAACCGCGCTGGCTCGCGGATCCAGCGCCGGTGCCCCCACCCTCAGGCCGGGTCGGCGGCTATCCA
TTCGAAGGTCTGCGGATTCTTGATCTGGGCATCATCGTGGCCGGCGGCGAGCTCAGCCGGCTGTTCGGCGACTTGGGCGC
CGAGGTCATCAAGGTCGAAAGTGCCGACCACCCCGACGGGTTGCGGCAGACCCGAGTCGGGGATGCGATGAGTGAATCAT
TCGCGTGGACCCATCGCAATCACCTCGCGCTGGGCCTGGACCTGCGCAACAGCGAGGGCAAAGCGATCTTCGGTCGCCTG
GTCGCTGAATCCGACGCGGTGTTCGCCAACTTCAAACCGGGAACCCTTACCTCACTTGGGTTTTCCTACGATGTACTGCA
CGCCTTCAACCCCCGGATCGTGCTCGCCGGGAGTAGTGCATTCGGGAACCGAGGGCCGTGGAGCACCCGGATGGGCTACG
GGCCACTGGTGCGCGCCGCCACCGGGGTCACCCGTGTTTGGACATCCGATGAGGCGCAGCCGGACAACTCTCGGCATCCC
TTCTACGACGCGACGACGATCTTCCCCGACCACGTTGTCGGGCGGGTCGGTGCCCTGCTCGCGCTGGCGGCCCTGATCCA
CCGCGATCGAACTGGCGGCGGAGCCCACGTCCACATCTCCCAGGCCGAAGTCGTCGTCAATCAGCTAGACACCATGTTCG
TTGCCGAGGCCGCCCGAGCGACCGACGTTGCCGAGATCCACCCGGACACCAGTGTGCATGCGGTCTACCCTTGTGCTGGC
GACGACGAATGGTGCGTCATCTCAATCCGCTCCGACGATGAATGGCGTCGCGCGACATCTGTTTTCGGCCAGCCTGAATT
GGCGAACGACCCACGCTTCGGGGCAAGCCGGTCACGCGTGGCCAACCGTTCGGAGTTGGTGGCCGCAGTGTCGGCCTGGA
CCAGCACCCGTACCCCGGTGCAAGCGGCCGGCGCGCTGCAGGCGGCCGGAGTTGCGGCCGGCCCGATGAATCGCCCGTCG
GATATCCTCGAGGATCCCCAGCTGATCGAGCGAAACCTGTTCCGCGACATGGTGCATCCGCTGATCGCCCGTCCGCTGCC
CGCCGAGACGGGTCCGGCTCCGTTTCGTCACATTCCGCAGGCACCCCAACGCCCGGCGCCGCTGCCCGGACAGGACAGCG
TTCAGATCTGCCGCAAGCTGCTCGGCATGACCGCGGACGAGACCGAACGCCTAATCAACGAGCGCGTAATGTTCGGGCCG
GCCGTCACTGCCTAA

Upstream 100 bases:

>100_bases
GGCACTGTCGTCCCTTCGCTCGGCGGGCCTTAGCCGCCGTCCAATGCGGTCGCGCCCGTGTAGTCACGGTAGCCGCGAAC
GCCGATGAAACAGCTACGGT

Downstream 100 bases:

>100_bases
GTGGTCTCGCCGGTGTCGTTCGTCGACGGTCGGCTGATTGCCCTTCCGGCTCCGAGATCGACGTTTTGCCCGCCTGTTCG
TGCTTTATCTGCGAAGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 804; Mature: 804

Protein sequence:

>804_residues
MHVPERLLDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLD
ESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPT
AGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQD
AYPIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPI
TAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYP
FEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRL
VAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHP
FYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAG
DDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPS
DILEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGP
AVTA

Sequences:

>Translated_804_residues
MHVPERLLDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLD
ESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPT
AGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQD
AYPIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPI
TAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYP
FEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRL
VAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHP
FYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAG
DDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPS
DILEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGP
AVTA
>Mature_804_residues
MHVPERLLDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVLNPLD
ESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPT
AGTPVLPPDGIASATAAVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQD
AYPIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPI
TAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYP
FEGLRILDLGIIVAGGELSRLFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRL
VAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHP
FYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAG
DDEWCVISIRSDDEWRRATSVFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPS
DILEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKLLGMTADETERLINERVMFGP
AVTA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=389, Percent_Identity=24.9357326478149, Blast_Score=137, Evalue=5e-32,
Organism=Homo sapiens, GI300863124, Length=416, Percent_Identity=23.5576923076923, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI300863126, Length=150, Percent_Identity=32.6666666666667, Blast_Score=84, Evalue=5e-16,
Organism=Escherichia coli, GI87082093, Length=351, Percent_Identity=26.7806267806268, Blast_Score=131, Evalue=2e-31,
Organism=Escherichia coli, GI1788717, Length=415, Percent_Identity=23.1325301204819, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI1786222, Length=408, Percent_Identity=22.3039215686275, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648431, Length=408, Percent_Identity=25, Blast_Score=130, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 85892; Mature: 85892

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVPERLLDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGT
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
SIGFAMHNANKRSAVLNPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRY
EEEEEEECCCCCHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCHHHHHHHHH
RHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQA
HHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
AWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQD
HHHHHHHHHHHHCCCCCCCCCHHHHCEEEEEECCCCCCCCCCHHCHHCCCCCCCCCCCCC
AYPIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKL
CCEEEECCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
CAEKTMKELVAAGQALGVPITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFV
HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCHHCCCCCCEEE
VDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSR
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHHH
LFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRL
HHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCEECCCEEEEEEEEECCCCCEEHHHH
VAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAA
HHCCCCEEEECCCCCEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHH
TGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHIS
CCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
QAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATS
HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHH
VFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPS
HCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCCCH
DILEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKL
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHH
LGMTADETERLINERVMFGPAVTA
HCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHVPERLLDAVRVLDLSDGCSAGGTDMVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGT
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
SIGFAMHNANKRSAVLNPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRY
EEEEEEECCCCCHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCHHHHHHHHH
RHLVALSITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATAAVQA
HHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
AWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGIRSTGRWRGRPKNQD
HHHHHHHHHHHHCCCCCCCCCHHHHCEEEEEECCCCCCCCCCHHCHHCCCCCCCCCCCCC
AYPIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQDPKYDVIGARLAAWPQISVLVAKL
CCEEEECCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
CAEKTMKELVAAGQALGVPITAVLTPSRILASEHFQAVGAITDAELVPGVRTGVPTGYFV
HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCHHCCCCCCEEE
VDGKRAGFRTPAPAAGQDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSR
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHHH
LFGDLGAEVIKVESADHPDGLRQTRVGDAMSESFAWTHRNHLALGLDLRNSEGKAIFGRL
HHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCEECCCEEEEEEEEECCCCCEEHHHH
VAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNRGPWSTRMGYGPLVRAA
HHCCCCEEEECCCCCEECCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHH
TGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVGRVGALLALAALIHRDRTGGGAHVHIS
CCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
QAEVVVNQLDTMFVAEAARATDVAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATS
HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHH
VFGQPELANDPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPS
HCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCCCH
DILEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQRPAPLPGQDSVQICRKL
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHH
LGMTADETERLINERVMFGPAVTA
HCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]