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The map label for this gene is apa [H]

Identifier: 148661666

GI number: 148661666

Start: 2117668

End: 2118645

Strand: Direct

Name: apa [H]

Synonym: MRA_1871

Alternate gene names: 148661666

Gene position: 2117668-2118645 (Clockwise)

Preceding gene: 148661665

Following gene: 148661667

Centisome position: 47.91

GC content: 69.33

Gene sequence:

>978_bases
ATGCATCAGGTGGACCCCAACTTGACACGTCGCAAGGGACGATTGGCGGCACTGGCTATCGCGGCGATGGCCAGCGCCAG
CCTGGTGACCGTTGCGGTGCCCGCGACCGCCAACGCCGATCCGGAGCCAGCGCCCCCGGTACCCACAACGGCCGCCTCGC
CGCCGTCGACCGCTGCAGCGCCACCCGCACCGGCGACACCTGTTGCCCCCCCACCACCGGCCGCCGCCAACACGCCGAAT
GCCCAGCCGGGCGATCCCAACGCAGCACCTCCGCCGGCCGACCCGAACGCACCGCCGCCACCTGTCATTGCCCCAAACGC
ACCCCAACCTGTCCGGATCGACAACCCGGTTGGAGGATTCAGCTTCGCGCTGCCTGCTGGCTGGGTGGAGTCTGACGCCG
CCCACTTCGACTACGGTTCAGCACTCCTCAGCAAAACCACCGGGGACCCGCCATTTCCCGGACAGCCGCCGCCGGTGGCC
AATGACACCCGTATCGTGCTCGGCCGGCTAGACCAAAAGCTTTACGCCAGCGCCGAAGCCACCGACTCCAAGGCCGCGGC
CCGGTTGGGCTCGGACATGGGTGAGTTCTATATGCCCTACCCGGGCACCCGGATCAACCAGGAAACCGTCTCGCTCGACG
CCAACGGGGTGTCTGGAAGCGCGTCGTATTACGAAGTCAAGTTCAGCGATCCGAGTAAGCCGAACGGCCAGATCTGGACG
GGCGTAATCGGCTCGCCCGCGGCGAACGCACCGGACGCCGGGCCCCCTCAGCGCTGGTTTGTGGTATGGCTCGGGACCGC
CAACAACCCGGTGGACAAGGGCGCGGCCAAGGCGCTGGCCGAATCGATCCGGCCTTTGGTCGCCCCGCCGCCGGCGCCGG
CACCGGCTCCTGCAGAGCCCGCTCCGGCGCCGGCGCCGGCCGGGGAAGTCGCTCCTACCCCGACGACACCGACACCGCAG
CGGACCTTACCGGCCTGA

Upstream 100 bases:

>100_bases
CAGGAAGTGGCCCTGCACCCGGCACCCCACCAACACGCCAGTTCATGAGCCGACCCGCGCCGTCCTTGCGTCGCGCCGTT
AACACGGTAGGTTCTTCGCC

Downstream 100 bases:

>100_bases
CCGGATCCGGCCGCACCCCAAGTGATACCCCTGGGCGGGGTGTCAGCGCGGCCGGGCGCTCTTGAGCCGGCGCAGCGGCG
TCCATGGAGCGCCGCCGGCC

Product: alanine and proline rich secreted protein Apa

Products: NA

Alternate protein names: 45/47 kDa antigen; FAP-B; Fibronectin attachment protein [H]

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAAPPAPATPVAPPPPAAANTPN
AQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVA
NDTRIVLGRLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEPAPAPAPAGEVAPTPTTPTPQ
RTLPA

Sequences:

>Translated_325_residues
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAAPPAPATPVAPPPPAAANTPN
AQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVA
NDTRIVLGRLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEPAPAPAPAGEVAPTPTTPTPQ
RTLPA
>Mature_325_residues
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAAPPAPATPVAPPPPAAANTPN
AQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVA
NDTRIVLGRLDQKLYASAEATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEPAPAPAPAGEVAPTPTTPTPQ
RTLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the apa family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010801 [H]

Pfam domain/function: PF07174 FAP [H]

EC number: NA

Molecular weight: Translated: 32721; Mature: 32721

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA
CCCCCCCHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCCE
SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA
EEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHCHHHHHHCCC
TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
CCHHHHHHHHCCHHCEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEE
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP
EECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
APAPAPAGEVAPTPTTPTPQRTLPA
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHQVDPNLTRRKGRLAALAIAAMASASLVTVAVPATANADPEPAPPVPTTAASPPSTAAA
CCCCCCCHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PPAPATPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAPQPVRIDNPVGGF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCCE
SFALPAGWVESDAAHFDYGSALLSKTTGDPPFPGQPPPVANDTRIVLGRLDQKLYASAEA
EEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHCHHHHHHCCC
TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWT
CCHHHHHHHHCCHHCEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEE
GVIGSPAANAPDAGPPQRWFVVWLGTANNPVDKGAAKALAESIRPLVAPPPAPAPAPAEP
EECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
APAPAPAGEVAPTPTTPTPQRTLPA
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]