| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148661378
Identifier: 148661378
GI number: 148661378
Start: 1787430
End: 1787828
Strand: Reverse
Name: 148661378
Synonym: MRA_1594
Alternate gene names: NA
Gene position: 1787828-1787430 (Counterclockwise)
Preceding gene: 148661379
Following gene: 148661377
Centisome position: 40.45
GC content: 73.43
Gene sequence:
>399_bases ATGACCGCCGGCGCCGGCGGGTCGCCGCCGACGCGACGATGCCCGGCCACGGAGGACCGGGCACCCGCGACAGTCGCCAC ACCGTCTAGCGCCGATCCTACCGCGTCACGCGCCGTGTCGTGGTGGTCGGTGCACGAGCATGTCGCGCCGGTCCTGGATG CTGCCGGGTCGTGGCCGATGGCCGGCACACCGGCCTGGCGTCAGCTCGACGACGCCGATCCTCGCAAATGGGCCGCGATC TGCGACGCAGCCCGGCACTGGGCTCTGAGGGTAGAGACGTGCCAGGAGGCGATGGCGCAGGCGTCACGTGACGTATCTGC GGCCGCCGACTGGCCCGGCATCGCCCGCGAGATCGTCCGACGGCGCGGCGTGTACATCCCGCGGGCGGGGGTGGCGTGA
Upstream 100 bases:
>100_bases ACCTCATCCGCACCCTCGCCGCAGCGCCGCCCCTGACTGACGAGCAGCGCACCCGGCTGGCCGAGCTGCTGCGCCCCGTG CGGCGGTCAGGCGGTGCCCG
Downstream 100 bases:
>100_bases TGGCCGACATCCCCTACGGCACCGACTATCCCGACGCCCCCTGGATCGACCGGGACGGGCACGTGCTCATCGACGACGGT GGCAAACCGACGCAAGTTCA
Product: putative phiRv1 phage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTAGAGGSPPTRRCPATEDRAPATVATPSSADPTASRAVSWWSVHEHVAPVLDAAGSWPMAGTPAWRQLDDADPRKWAAI CDAARHWALRVETCQEAMAQASRDVSAAADWPGIAREIVRRRGVYIPRAGVA
Sequences:
>Translated_132_residues MTAGAGGSPPTRRCPATEDRAPATVATPSSADPTASRAVSWWSVHEHVAPVLDAAGSWPMAGTPAWRQLDDADPRKWAAI CDAARHWALRVETCQEAMAQASRDVSAAADWPGIAREIVRRRGVYIPRAGVA >Mature_131_residues TAGAGGSPPTRRCPATEDRAPATVATPSSADPTASRAVSWWSVHEHVAPVLDAAGSWPMAGTPAWRQLDDADPRKWAAIC DAARHWALRVETCQEAMAQASRDVSAAADWPGIAREIVRRRGVYIPRAGVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2656c
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1583_MYCTU (O06607)
Other databases:
- EMBL: BX842577 - EMBL: AE000516 - PIR: A70542 - RefSeq: NP_216099.1 - RefSeq: NP_338102.1 - EnsemblBacteria: EBMYCT00000000985 - EnsemblBacteria: EBMYCT00000070038 - GeneID: 886315 - GeneID: 926623 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT3573.2 - KEGG: mtu:Rv1583c - TIGR: MT3573.2 - TubercuList: Rv1583c - GeneTree: EBGT00050000018640 - HOGENOM: HBG564847 - OMA: WILRIEG - ProtClustDB: CLSK791264
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14039; Mature: 13908
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGAGGSPPTRRCPATEDRAPATVATPSSADPTASRAVSWWSVHEHVAPVLDAAGSWPM CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC AGTPAWRQLDDADPRKWAAICDAARHWALRVETCQEAMAQASRDVSAAADWPGIAREIVR CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH RRGVYIPRAGVA HCCCCCCCCCCC >Mature Secondary Structure TAGAGGSPPTRRCPATEDRAPATVATPSSADPTASRAVSWWSVHEHVAPVLDAAGSWPM CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC AGTPAWRQLDDADPRKWAAICDAARHWALRVETCQEAMAQASRDVSAAADWPGIAREIVR CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH RRGVYIPRAGVA HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036