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The map label for this gene is wcaE [C]

Identifier: 148661310

GI number: 148661310

Start: 1707324

End: 1708112

Strand: Reverse

Name: wcaE [C]

Synonym: MRA_1526

Alternate gene names: 148661310

Gene position: 1708112-1707324 (Counterclockwise)

Preceding gene: 148661311

Following gene: 148661303

Centisome position: 38.65

GC content: 62.23

Gene sequence:

>789_bases
GTGACGTCTGCTCCGACCGTCTCGGTGATAACGATCTCGTTCAACGACCTCGACGGGTTGCAGCGCACGGTGAAAAGTGT
GCGGGCGCAACGCTACCGGGGACGCATCGAGCACATCGTAATCGACGGTGGCAGCGGCGACGACGTGGTGGCATACCTGT
CCGGGTGTGAACCAGGCTTCGCGTATTGGCAGTCCGAGCCCGACGGCGGGCGGTACGACGCGATGAACCAGGGCATCGCG
CACGCATCGGGTGATCTGTTGTGGTTCTTGCACTCCGCCGATCGTTTTTCCGGGCCCGACGTGGTAGCCCAGGCCGTGGA
GGCGCTATCCGGCAAGGGACCGGTGTCCGAATTGTGGGGCTTCGGGATGGATCGTCTCGTCGGGCTCGATCGGGTGCGCG
GCCCGATACCTTTCAGCCTGCGCAAATTCCTGGCCGGCAAGCAGGTTGTTCCGCATCAAGCATCGTTCTTCGGATCATCG
CTGGTGGCCAAGATCGGTGGCTACGACCTTGATTTCGGGATCGCCGCCGACCAGGAATTCATATTGCGGGCCGCGCTGGT
ATGCGAGCCGGTCACGATTCGGTGTGTGCTGTGCGAGTTCGACACCACGGGCGTCGGCTCGCACCGGGAACCAAGCGCGG
TCTTCGGTGATCTGCGCCGCATGGGCGACCTTCATCGCCGCTACCCGTTCGGGGGAAGGCGAATATCACATGCCTACCTA
CGCGGCCGGGAGTTCTACGCCTACAACAGTCGATTCTGGGAAAACGTCTTCACGCGAATGTCGAAATAG

Upstream 100 bases:

>100_bases
TCGTTGCTCGGAGGTTCCTATGCGGCGAATCTTCGAGGCACCTTCATCGGTATCAAGACCCGGTGATCCACAATCGCCGC
CAGCAACCTAGGGGAACTCG

Downstream 100 bases:

>100_bases
ATTGACGCGCCGGCGCGTCAATCGCTGCCCCGGAAGAAGATGCCATCGGCCTGCAGCATTCGACCGTTGCGGGGGTCGGT
GAAACCGGGTTGCAATCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTSAPTVSVITISFNDLDGLQRTVKSVRAQRYRGRIEHIVIDGGSGDDVVAYLSGCEPGFAYWQSEPDGGRYDAMNQGIA
HASGDLLWFLHSADRFSGPDVVAQAVEALSGKGPVSELWGFGMDRLVGLDRVRGPIPFSLRKFLAGKQVVPHQASFFGSS
LVAKIGGYDLDFGIAADQEFILRAALVCEPVTIRCVLCEFDTTGVGSHREPSAVFGDLRRMGDLHRRYPFGGRRISHAYL
RGREFYAYNSRFWENVFTRMSK

Sequences:

>Translated_262_residues
MTSAPTVSVITISFNDLDGLQRTVKSVRAQRYRGRIEHIVIDGGSGDDVVAYLSGCEPGFAYWQSEPDGGRYDAMNQGIA
HASGDLLWFLHSADRFSGPDVVAQAVEALSGKGPVSELWGFGMDRLVGLDRVRGPIPFSLRKFLAGKQVVPHQASFFGSS
LVAKIGGYDLDFGIAADQEFILRAALVCEPVTIRCVLCEFDTTGVGSHREPSAVFGDLRRMGDLHRRYPFGGRRISHAYL
RGREFYAYNSRFWENVFTRMSK
>Mature_261_residues
TSAPTVSVITISFNDLDGLQRTVKSVRAQRYRGRIEHIVIDGGSGDDVVAYLSGCEPGFAYWQSEPDGGRYDAMNQGIAH
ASGDLLWFLHSADRFSGPDVVAQAVEALSGKGPVSELWGFGMDRLVGLDRVRGPIPFSLRKFLAGKQVVPHQASFFGSSL
VAKIGGYDLDFGIAADQEFILRAALVCEPVTIRCVLCEFDTTGVGSHREPSAVFGDLRRMGDLHRRYPFGGRRISHAYLR
GREFYAYNSRFWENVFTRMSK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family

Homologues:

Organism=Escherichia coli, GI1788368, Length=93, Percent_Identity=44.0860215053763, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1514_MYCTU (P71793)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   E70714
- RefSeq:   NP_216030.1
- RefSeq:   NP_336017.1
- ProteinModelPortal:   P71793
- EnsemblBacteria:   EBMYCT00000003695
- EnsemblBacteria:   EBMYCT00000069068
- GeneID:   886457
- GeneID:   924400
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1564
- KEGG:   mtu:Rv1514c
- TIGR:   MT1564
- TubercuList:   Rv1514c
- GeneTree:   EBGT00050000018153
- HOGENOM:   HBG571014
- OMA:   VNSYLLE
- ProtClustDB:   CLSK791216
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: NA

Molecular weight: Translated: 28965; Mature: 28834

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAPTVSVITISFNDLDGLQRTVKSVRAQRYRGRIEHIVIDGGSGDDVVAYLSGCEPGF
CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCH
AYWQSEPDGGRYDAMNQGIAHASGDLLWFLHSADRFSGPDVVAQAVEALSGKGPVSELWG
HHCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHH
FGMDRLVGLDRVRGPIPFSLRKFLAGKQVVPHQASFFGSSLVAKIGGYDLDFGIAADQEF
CCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH
ILRAALVCEPVTIRCVLCEFDTTGVGSHREPSAVFGDLRRMGDLHRRYPFGGRRISHAYL
HHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RGREFYAYNSRFWENVFTRMSK
CCCEEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSAPTVSVITISFNDLDGLQRTVKSVRAQRYRGRIEHIVIDGGSGDDVVAYLSGCEPGF
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCH
AYWQSEPDGGRYDAMNQGIAHASGDLLWFLHSADRFSGPDVVAQAVEALSGKGPVSELWG
HHCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHH
FGMDRLVGLDRVRGPIPFSLRKFLAGKQVVPHQASFFGSSLVAKIGGYDLDFGIAADQEF
CCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH
ILRAALVCEPVTIRCVLCEFDTTGVGSHREPSAVFGDLRRMGDLHRRYPFGGRRISHAYL
HHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RGREFYAYNSRFWENVFTRMSK
CCCEEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036