| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148661279
Identifier: 148661279
GI number: 148661279
Start: 1677534
End: 1678400
Strand: Reverse
Name: 148661279
Synonym: MRA_1495A
Alternate gene names: NA
Gene position: 1678400-1677534 (Counterclockwise)
Preceding gene: 148661285
Following gene: 148661275
Centisome position: 37.97
GC content: 66.44
Gene sequence:
>867_bases ATGTGGTGTCCCAGTGTTTCGCTGTCGATCTGGGCTAACGCTTGGCTCGCCGGCAAGGCTGCTCCCGACGACGTGTTGGA TGCATTATCACTTTGGGCGCCAACGCAATCCGTCGCAGCTTATGATGCCGTGGCTGCGGGCCACACCGGGCTGCCGTGGC CCGACGTCCACGATGCTGGAACGGTCTCGCTCCTGCAGACACTGCGCGCCGCGGTGGGCCGGCGCCGACTGCGGGGGACG ATCAATGTGGTGTTGCCGGTGCCGGGCGATGTGCGCGGGCTGGCTGCGGGAACACAGTTCGAGCACGACGCCCTTGCCGC CGGCGAGGCGGTGATCGTCGCCAACCCGGAGGATCCCGGCAGCGCCGTTGGCCTGGTCCCGGAGTTCTCCTATGGCGATG TCGACGAAGCCGCGCAGAGCGAGCCACTCACGCCCGAATTGTGTGCACTTTCTTGGATGGTGTATTCACTTCCCGGGGCC CCAGTGTTGGAACACTACGAGCTCGGCGATGCCGAATACGCGTTGCGGTCAGCGGTGCGCTCGGCCGCCGAAGCCTTGAG CACCATCGGACTGGGATCTAGCGACGTCGCCAAGCCCCGTGGCCTCGTCGAGCAGTTGCTCGAATCGTCACGGCAACACC GGGTTCCCGACCACGCGCCATCGCGCGCATTGCGGGTGCTCGAGAATGCCGCGCACGTCGATGCGATCATCGCGGTCAGT GCCGGGCTGAGTCGATTGCCGATCGGAACGCAGTCGTTGTCGGACGCTCAGCGTGCCACCGATGCGTTGAGACCGTTGAC CGCCGTGGTGCGCTCGGCCCGGATGTCCGCGGTCACGGCGATCCTGCACTCGGCCTGGCCGGACTGA
Upstream 100 bases:
>100_bases CGAGCACCAACGCCGCGATAAGCCAGATCAAAGCGACGGGCATGCGCTTAGGATACGCGTGATCCGCGTCAGCCGGGTCG AACAACTACACTGCAAGATC
Downstream 100 bases:
>100_bases CGCTAGCCACGCAGTGCGGCGGACGGCATGGCTGGCCGTTGATGCTGGACAGACAGCCCGGCACCGGATCGGGGCCACTC ACCCGCGCAGGTATACGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MWCPSVSLSIWANAWLAGKAAPDDVLDALSLWAPTQSVAAYDAVAAGHTGLPWPDVHDAGTVSLLQTLRAAVGRRRLRGT INVVLPVPGDVRGLAAGTQFEHDALAAGEAVIVANPEDPGSAVGLVPEFSYGDVDEAAQSEPLTPELCALSWMVYSLPGA PVLEHYELGDAEYALRSAVRSAAEALSTIGLGSSDVAKPRGLVEQLLESSRQHRVPDHAPSRALRVLENAAHVDAIIAVS AGLSRLPIGTQSLSDAQRATDALRPLTAVVRSARMSAVTAILHSAWPD
Sequences:
>Translated_288_residues MWCPSVSLSIWANAWLAGKAAPDDVLDALSLWAPTQSVAAYDAVAAGHTGLPWPDVHDAGTVSLLQTLRAAVGRRRLRGT INVVLPVPGDVRGLAAGTQFEHDALAAGEAVIVANPEDPGSAVGLVPEFSYGDVDEAAQSEPLTPELCALSWMVYSLPGA PVLEHYELGDAEYALRSAVRSAAEALSTIGLGSSDVAKPRGLVEQLLESSRQHRVPDHAPSRALRVLENAAHVDAIIAVS AGLSRLPIGTQSLSDAQRATDALRPLTAVVRSARMSAVTAILHSAWPD >Mature_288_residues MWCPSVSLSIWANAWLAGKAAPDDVLDALSLWAPTQSVAAYDAVAAGHTGLPWPDVHDAGTVSLLQTLRAAVGRRRLRGT INVVLPVPGDVRGLAAGTQFEHDALAAGEAVIVANPEDPGSAVGLVPEFSYGDVDEAAQSEPLTPELCALSWMVYSLPGA PVLEHYELGDAEYALRSAVRSAAEALSTIGLGSSDVAKPRGLVEQLLESSRQHRVPDHAPSRALRVLENAAHVDAIIAVS AGLSRLPIGTQSLSDAQRATDALRPLTAVVRSARMSAVTAILHSAWPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.bovis Mb1522c, M.leprae ML1804 and M.avium MAV321
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1486_MYCTU (P71766)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: A70711 - RefSeq: NP_216002.2 - RefSeq: NP_335984.1 - EnsemblBacteria: EBMYCT00000003797 - EnsemblBacteria: EBMYCT00000071191 - GeneID: 886519 - GeneID: 925512 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1533 - KEGG: mtu:Rv1486c - TIGR: MT1533 - TubercuList: Rv1486c - GeneTree: EBGT00050000015391 - HOGENOM: HBG579645 - OMA: RIPDHAP - ProtClustDB: CLSK799383
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30129; Mature: 30129
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWCPSVSLSIWANAWLAGKAAPDDVLDALSLWAPTQSVAAYDAVAAGHTGLPWPDVHDAG CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCH TVSLLQTLRAAVGRRRLRGTINVVLPVPGDVRGLAAGTQFEHDALAAGEAVIVANPEDPG HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHCCCCCCCHHHHHCCCEEEEECCCCCC SAVGLVPEFSYGDVDEAAQSEPLTPELCALSWMVYSLPGAPVLEHYELGDAEYALRSAVR CEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH SAAEALSTIGLGSSDVAKPRGLVEQLLESSRQHRVPDHAPSRALRVLENAAHVDAIIAVS HHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AGLSRLPIGTQSLSDAQRATDALRPLTAVVRSARMSAVTAILHSAWPD CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MWCPSVSLSIWANAWLAGKAAPDDVLDALSLWAPTQSVAAYDAVAAGHTGLPWPDVHDAG CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCH TVSLLQTLRAAVGRRRLRGTINVVLPVPGDVRGLAAGTQFEHDALAAGEAVIVANPEDPG HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHCCCCCCCHHHHHCCCEEEEECCCCCC SAVGLVPEFSYGDVDEAAQSEPLTPELCALSWMVYSLPGAPVLEHYELGDAEYALRSAVR CEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH SAAEALSTIGLGSSDVAKPRGLVEQLLESSRQHRVPDHAPSRALRVLENAAHVDAIIAVS HHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AGLSRLPIGTQSLSDAQRATDALRPLTAVVRSARMSAVTAILHSAWPD CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036