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The map label for this gene is sufD [C]

Identifier: 148661254

GI number: 148661254

Start: 1651043

End: 1652236

Strand: Direct

Name: sufD [C]

Synonym: MRA_1471

Alternate gene names: 148661254

Gene position: 1651043-1652236 (Clockwise)

Preceding gene: 148661253

Following gene: 148661255

Centisome position: 37.35

GC content: 67.59

Gene sequence:

>1194_bases
ATGACGGCTCCGGGACTGACAGCAGCCGTCGAGGGGATCGCACACAACAAGGGCGAGCTGTTCGCCTCCTTTGACGTGGA
CGCGTTCGAGGTTCCGCACGGCCGCGACGAGATCTGGCGGTTCACCCCGTTGCGGCGGCTGCGTGGCCTGCACGACGGCT
CCGCGCGGGCCACCGGTAGCGCCACGATCACGGTCAGCGAGCGGCCGGGCGTATACACCCAGACCGTGCGCCGCGGCGAT
CCACGACTGGGCGAGGGCGGCGTACCCACCGACCGCGTTGCCGCCCAAGCGTTTTCGTCGTTCAACTCCGCGACTCTGGT
CACCGTCGAGCGCGACACCCAGGTCGTCGAGCCGGTAGGCATCACCGTGACCGGGCCGGGGGAGGGCGCGGTGGCCTATG
GGCACCTGCAGGTGCGTATCGAGGAGCTTGGCGAGGCGGTCGTGGTCATCGACCACCGGGGCGGCGGAACCTACGCCGAC
AACGTCGAGTTCGTTGTCGACGACGCCGCTCGGCTGACCGCCGTGTGGATCGCCGACTGGGCCGACAACACCGTTCACCT
CAGCGCGCACCATGCTCGGATCGGCAAGGACGCGGTGCTGCGCCACGTCACCGTCATGTTGGGCGGCGACGTGGTGCGAA
TGTCGGCGGGCGTGCGGTTCTGCGGTGCGGGTGGGGACGCGGAACTGCTGGGGCTGTATTTCGCCGACGACGGCCAGCAC
CTGGAGTCGCGGCTGCTGGTGGACCACGCCCACCCCGACTGCAAGTCGAACGTGCTGTATAAGGGTGCACTGCAAGGTGA
TCCGGCGTCGTCGTTGCCCGACGCACACACGGTCTGGGTGGGTGACGTGCTGATCCGTGCGCAGGCCACCGGCACCGACA
CCTTCGAGGTGAACCGGAACCTGGTGCTCACCGACGGCGCGCGTGCCGACTCGGTGCCCAACCTGGAGATCGAGACCGGC
GAGATCGTCGGCGCCGGACACGCCAGCGCCACCGGTCGCTTCGACGATGAGCAATTGTTCTACCTGCGTTCGCGCGGTAT
TCCCGAAGCACAGGCCCGCCGGCTGGTGGTCCGCGGCTTCTTCGGTGAGATCATCGCCAAGATCGCGGTGCCCGAGGTAC
GCGAGCGCCTGACCGCAGCCATCGAACACGAGCTGGAAATCACGGAATCAACGGAAAAGACAACAGTCTCATGA

Upstream 100 bases:

>100_bases
TGGTGCGCGGCTTCGTCGAGCCGATCGCCAAGGAGCTGCCGATGGAGTACGCGCTGGAGCTCAACCGGCTGATCGAGCTG
CAGATGGAGGGCGCGGTCGG

Downstream 100 bases:

>100_bases
CCATTTTGGAAATTAAGGACCTGCACGTCAGCGTGGAGAACCCCGCGGAGGCGGACCACGAGATCCCGATCCTGCGCGGC
GTCGACCTCACCGTGAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTAPGLTAAVEGIAHNKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSARATGSATITVSERPGVYTQTVRRGD
PRLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGPGEGAVAYGHLQVRIEELGEAVVVIDHRGGGTYAD
NVEFVVDDAARLTAVWIADWADNTVHLSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFADDGQH
LESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEIETG
EIVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRERLTAAIEHELEITESTEKTTVS

Sequences:

>Translated_397_residues
MTAPGLTAAVEGIAHNKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSARATGSATITVSERPGVYTQTVRRGD
PRLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGPGEGAVAYGHLQVRIEELGEAVVVIDHRGGGTYAD
NVEFVVDDAARLTAVWIADWADNTVHLSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFADDGQH
LESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEIETG
EIVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRERLTAAIEHELEITESTEKTTVS
>Mature_396_residues
TAPGLTAAVEGIAHNKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSARATGSATITVSERPGVYTQTVRRGDP
RLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGPGEGAVAYGHLQVRIEELGEAVVVIDHRGGGTYADN
VEFVVDDAARLTAVWIADWADNTVHLSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFADDGQHL
ESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEIETGE
IVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRERLTAAIEHELEITESTEKTTVS

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family

Homologues:

Organism=Escherichia coli, GI1787971, Length=314, Percent_Identity=24.8407643312102, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1462_MYCTU (O53153)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   A70872
- RefSeq:   NP_215978.1
- RefSeq:   NP_335959.1
- ProteinModelPortal:   O53153
- SMR:   O53153
- EnsemblBacteria:   EBMYCT00000003295
- EnsemblBacteria:   EBMYCT00000072745
- GeneID:   886567
- GeneID:   924462
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1509
- KEGG:   mtu:Rv1462
- TIGR:   MT1509
- TubercuList:   Rv1462
- GeneTree:   EBGT00050000017319
- HOGENOM:   HBG322394
- OMA:   ARGIPED
- ProtClustDB:   CLSK871933
- GO:   GO:0040007
- InterPro:   IPR000825
- InterPro:   IPR011542
- TIGRFAMs:   TIGR01981

Pfam domain/function: PF01458 UPF0051

EC number: NA

Molecular weight: Translated: 42523; Mature: 42392

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPGLTAAVEGIAHNKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSARATGS
CCCCCHHHHHHHHHCCCCCEEEEECCCEEECCCCHHHHEEECHHHHHCCCCCCCCCCCCC
ATITVSERPGVYTQTVRRGDPRLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVG
EEEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECCEE
ITVTGPGEGAVAYGHLQVRIEELGEAVVVIDHRGGGTYADNVEFVVDDAARLTAVWIADW
EEEECCCCCCEEEEEEEEEEEHHCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEEEEC
ADNTVHLSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFADDGQH
CCCEEEEEEHHHHCCHHHHHHEEEEEECCCEEEEECCEEEECCCCCCEEEEEEEECCCHH
LESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRN
HHHEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEECCC
LVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGF
EEEECCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
FGEIIAKIAVPEVRERLTAAIEHELEITESTEKTTVS
HHHHHHHHCCHHHHHHHHHHHHHCEEEECCCCCCCCC
>Mature Secondary Structure 
TAPGLTAAVEGIAHNKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSARATGS
CCCCHHHHHHHHHCCCCCEEEEECCCEEECCCCHHHHEEECHHHHHCCCCCCCCCCCCC
ATITVSERPGVYTQTVRRGDPRLGEGGVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVG
EEEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECCEE
ITVTGPGEGAVAYGHLQVRIEELGEAVVVIDHRGGGTYADNVEFVVDDAARLTAVWIADW
EEEECCCCCCEEEEEEEEEEEHHCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEEEEC
ADNTVHLSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFADDGQH
CCCEEEEEEHHHHCCHHHHHHEEEEEECCCEEEEECCEEEECCCCCCEEEEEEEECCCHH
LESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFEVNRN
HHHEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEECCC
LVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARRLVVRGF
EEEECCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
FGEIIAKIAVPEVRERLTAAIEHELEITESTEKTTVS
HHHHHHHHCCHHHHHHHHHHHHHCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036