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The map label for this gene is lprD

Identifier: 148661132

GI number: 148661132

Start: 1509853

End: 1510233

Strand: Reverse

Name: lprD

Synonym: MRA_1351

Alternate gene names: NA

Gene position: 1510233-1509853 (Counterclockwise)

Preceding gene: 148661136

Following gene: 148661131

Centisome position: 34.17

GC content: 62.99

Gene sequence:

>381_bases
GTGTCCACTACCCGCCGTCGCAGACCCGCGCTGATCGCGTTGGTGATCATCGCGACCTGTGGTTGCCTGGCCCTGGGTTG
GTGGCAGTGGACCAGGTTTCAATCGACCTCGGGCACCTTTCAAAATCTGGGTTACGCGTTGCAGTGGCCATTGTTTGCTT
GGTTCTGCGTCTACGCGTACCGCAACTTCGTTCGGTATGAAGAGACGCCCCCGCAACCGCCCACCGGCGGCGCCGCCGCC
GAGATACCTGCCGGATTGCTGCCCGAGCGGCCGAAGCCGGCGCAGCAGCCACCCGACGATCCCGTACTACGGGAATACAA
CGCCTACCTAGCCGAGCTAGCCAAGGACGATGCCAGGAAGCAGAACAGGACCACCGCATGA

Upstream 100 bases:

>100_bases
GCTACACCTGGGGTATTAGGCAAGGCTAGCCTTGTACTTAGTGGATATCGCCACATCGCGCCCGGGCGCCCAATAGAGCA
GTGCGCGGTAACGTCGTGGG

Downstream 100 bases:

>100_bases
CCGCACCCGAAACGCCCGCGGCGCAGCACGCCGAGCCTGCCATCGCCGTCGAGAGGATTCGCACCGCTTTGCTCGGCTAC
CGGATCATGGCGTGGACGAC

Product: putative lipoprotein LprD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSTTRRRRPALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLGYALQWPLFAWFCVYAYRNFVRYEETPPQPPTGGAAA
EIPAGLLPERPKPAQQPPDDPVLREYNAYLAELAKDDARKQNRTTA

Sequences:

>Translated_126_residues
MSTTRRRRPALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLGYALQWPLFAWFCVYAYRNFVRYEETPPQPPTGGAAA
EIPAGLLPERPKPAQQPPDDPVLREYNAYLAELAKDDARKQNRTTA
>Mature_125_residues
STTRRRRPALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLGYALQWPLFAWFCVYAYRNFVRYEETPPQPPTGGAAAE
IPAGLLPERPKPAQQPPDDPVLREYNAYLAELAKDDARKQNRTTA

Specific function: Unknown

COG id: COG4578

COG function: function code K; Glucitol operon activator

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1177

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1343_MYCTU (Q11013)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   F70739
- RefSeq:   NP_215859.1
- RefSeq:   NP_335835.1
- EnsemblBacteria:   EBMYCT00000000848
- EnsemblBacteria:   EBMYCT00000070605
- GeneID:   886852
- GeneID:   924652
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1384
- KEGG:   mtu:Rv1343c
- TIGR:   MT1384
- TubercuList:   Rv1343c
- GeneTree:   EBGT00050000017270
- HOGENOM:   HBG672647
- OMA:   KFVRYEE
- ProtClustDB:   CLSK791109

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14273; Mature: 14142

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1df77f88)-; HASH(0x1e11d694)-;

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTRRRRPALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLGYALQWPLFAWFCVYAY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHH
RNFVRYEETPPQPPTGGAAAEIPAGLLPERPKPAQQPPDDPVLREYNAYLAELAKDDARK
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QNRTTA
CCCCCH
>Mature Secondary Structure 
STTRRRRPALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLGYALQWPLFAWFCVYAY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHH
RNFVRYEETPPQPPTGGAAAEIPAGLLPERPKPAQQPPDDPVLREYNAYLAELAKDDARK
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QNRTTA
CCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036