Click here to switch to the map view.

The map label for this gene is fdxC [H]

Identifier: 148660965

GI number: 148660965

Start: 1310315

End: 1310641

Strand: Direct

Name: fdxC [H]

Synonym: MRA_1188

Alternate gene names: 148660965

Gene position: 1310315-1310641 (Clockwise)

Preceding gene: 148660961

Following gene: 148660966

Centisome position: 29.65

GC content: 61.16

Gene sequence:

>327_bases
GTGACGTACACGATCGCCGAACCCTGTGTCGACATCAAGGACAAGGCATGCATTGAGGAGTGCCCGGTCGATTGCATCTA
CGAGGGCGCCCGGATGCTGTATATCCACCCCGACGAATGCGTCGACTGTGGGGCTTGCGAGCCGGTCTGCCCCGTTGAAG
CTATCTTCTACGAAGACGATGTGCCCGAACAGTGGAGCCATTACACCCAGATCAACGCCGATTTCTTCGCCGAGCTGGGA
TCGCCGGGCGGTGCGGCCAAGGTTGGCATGACCGAGAACGACCCGCAAGCGGTCAAGGATCTGGCGCCGCAGAGCGAGGA
CGCCTGA

Upstream 100 bases:

>100_bases
AACCGAACGCATTGCCTCAGCAGGGCCCGGAGGAAGCCTTGGCGAGGTGGACAGCAGCCCACACATAGCGGTATCTGGAA
GACATGTTGAGGAGACGTCC

Downstream 100 bases:

>100_bases
GCCGGCTGGGGGCAGCACCCGCTCGCGGCGGAGTGTCGGCGTCTCTGCCCGTCTTCCCCTGGGACACCTTGGCCGACGCG
AAAGCGCTGGCCGGGGCCCA

Product: ferredoxin FdxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDDVPEQWSHYTQINADFFAELG
SPGGAAKVGMTENDPQAVKDLAPQSEDA

Sequences:

>Translated_108_residues
MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDDVPEQWSHYTQINADFFAELG
SPGGAAKVGMTENDPQAVKDLAPQSEDA
>Mature_107_residues
TYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDDVPEQWSHYTQINADFFAELGS
PGGAAKVGMTENDPQAVKDLAPQSEDA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 11839; Mature: 11708

Theoretical pI: Translated: 3.68; Mature: 3.68

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDD
CCCCCCCCCCCCCCHHHHHHCCHHHEECCCEEEEECCHHCCCCCCCCCCCCCEEEEECCC
VPEQWSHYTQINADFFAELGSPGGAAKVGMTENDPQAVKDLAPQSEDA
CCHHHHHHCCCCHHHHHHCCCCCCCEECCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
TYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDD
CCCCCCCCCCCCCHHHHHHCCHHHEECCCEEEEECCHHCCCCCCCCCCCCCEEEEECCC
VPEQWSHYTQINADFFAELGSPGGAAKVGMTENDPQAVKDLAPQSEDA
CCHHHHHHCCCCHHHHHHCCCCCCCEECCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 467663 [H]