Click here to switch to the map view.

The map label for this gene is PE_PGRS20 [H]

Identifier: 148660960

GI number: 148660960

Start: 1303065

End: 1303991

Strand: Reverse

Name: PE_PGRS20 [H]

Synonym: MRA_1183

Alternate gene names: 148660960

Gene position: 1303991-1303065 (Counterclockwise)

Preceding gene: 148660962

Following gene: 148660957

Centisome position: 29.5

GC content: 64.94

Gene sequence:

>927_bases
ATGTCGTTTGTGTTCGCGGCGCCAGAGGCACTGGCGGCGGCCGCTGCGGACATGGCCGGTATCGGTTCGACTCTTAACGC
CGCCAATGTGGTTGCGGCGGTTCCCACCACCGGAGTCCTGGCCGCAGCCGCGGACGAGGTCTCGACTCAGGTCGCCGCGC
TGCTTTCCGCGCATGCTCAGGGGTATCAGCAGCTCAGCCGGCAGATGATGACAGCCTTCCACGACCAGTTCGTGCAGGCG
CTGAGAGCAAGTGCAGACGCGTATGCAACCGCCGAGGCCAGCGCCGCGCAGACCATGGTGAACGCCGTGAATGCGCCCGC
AAGAGCGTTGCTGGGGCATCCACTGATTAGCGCCGACGCCTCGACGGGTGGGGGCTCGAACGCGCTGAGCCGGGTCCAAA
GCATGTTCCTCGGCACTGGCGGCTCCAGTGCACTTGGCGGTAGCGCCGCTGCAAATGCCGCTGCCAGCGGTGCACTGCAG
CTCCAACCCACCGGTGGGGCCAGCGGTTTGTCCGCCGTCGGCGCCCTGCTGCCGCGCGCCGGAGCGGCCGCCGCCGCGGC
GCTGCCGGCTCTGGCCGCCGAGTCGATCGGCAACGCAATCAAGAATCTCTACAACGCCGTCGAACCGTGGGTGCAGTACG
GCTTCAACCTCACCGCATGGGCGGTGGGATGGCTGCCCTACATCGGCATACTGGCACCGCAGATCAACTTCTTCTATTAC
CTCGGCGAGCCCATCGTGCAGGCAGTCCTGTTCAATGCGATCGACTTCGTGGACGGGACAGTCACTTTCAGCCAGGCACT
AACCAATATCGAAACGGCCACCGCGGCATCGATCAACCAATTCATCAACACCGAGATCAACTGGATACGCGGCTTCCTGC
CGCCGTTGCCGCCAATCAGCCCGCCGGGATTCCCGTCTTTGCCCTAA

Upstream 100 bases:

>100_bases
GCGCAGGTCACAGCCGATCGCGATACCATCCGTGAGAGGCCAGCGTCTGAACAAGCCCCCGGCGACAGCCGCCGCGTGGT
GAACCAGGAGAAGGTACGAG

Downstream 100 bases:

>100_bases
CTTCGGACTAGCCAGATCCGTCAGCTTGGACCCTGCGCCGCCACAGCACCCACGCCGGTGGCACGGCCCCTGCCACGACG
AACACCAGCGCGCCGTAGAC

Product: PE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSFVFAAPEALAAAAADMAGIGSTLNAANVVAAVPTTGVLAAAADEVSTQVAALLSAHAQGYQQLSRQMMTAFHDQFVQA
LRASADAYATAEASAAQTMVNAVNAPARALLGHPLISADASTGGGSNALSRVQSMFLGTGGSSALGGSAAANAAASGALQ
LQPTGGASGLSAVGALLPRAGAAAAAALPALAAESIGNAIKNLYNAVEPWVQYGFNLTAWAVGWLPYIGILAPQINFFYY
LGEPIVQAVLFNAIDFVDGTVTFSQALTNIETATAASINQFINTEINWIRGFLPPLPPISPPGFPSLP

Sequences:

>Translated_308_residues
MSFVFAAPEALAAAAADMAGIGSTLNAANVVAAVPTTGVLAAAADEVSTQVAALLSAHAQGYQQLSRQMMTAFHDQFVQA
LRASADAYATAEASAAQTMVNAVNAPARALLGHPLISADASTGGGSNALSRVQSMFLGTGGSSALGGSAAANAAASGALQ
LQPTGGASGLSAVGALLPRAGAAAAAALPALAAESIGNAIKNLYNAVEPWVQYGFNLTAWAVGWLPYIGILAPQINFFYY
LGEPIVQAVLFNAIDFVDGTVTFSQALTNIETATAASINQFINTEINWIRGFLPPLPPISPPGFPSLP
>Mature_307_residues
SFVFAAPEALAAAAADMAGIGSTLNAANVVAAVPTTGVLAAAADEVSTQVAALLSAHAQGYQQLSRQMMTAFHDQFVQAL
RASADAYATAEASAAQTMVNAVNAPARALLGHPLISADASTGGGSNALSRVQSMFLGTGGSSALGGSAAANAAASGALQL
QPTGGASGLSAVGALLPRAGAAAAAALPALAAESIGNAIKNLYNAVEPWVQYGFNLTAWAVGWLPYIGILAPQINFFYYL
GEPIVQAVLFNAIDFVDGTVTFSQALTNIETATAASINQFINTEINWIRGFLPPLPPISPPGFPSLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000084 [H]

Pfam domain/function: PF00934 PE [H]

EC number: NA

Molecular weight: Translated: 31002; Mature: 30871

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVFAAPEALAAAAADMAGIGSTLNAANVVAAVPTTGVLAAAADEVSTQVAALLSAHAQ
CCEEECCHHHHHHHHHHHHHCCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
GYQQLSRQMMTAFHDQFVQALRASADAYATAEASAAQTMVNAVNAPARALLGHPLISADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
STGGGSNALSRVQSMFLGTGGSSALGGSAAANAAASGALQLQPTGGASGLSAVGALLPRA
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCC
GAAAAAALPALAAESIGNAIKNLYNAVEPWVQYGFNLTAWAVGWLPYIGILAPQINFFYY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEE
LGEPIVQAVLFNAIDFVDGTVTFSQALTNIETATAASINQFINTEINWIRGFLPPLPPIS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PPGFPSLP
CCCCCCCC
>Mature Secondary Structure 
SFVFAAPEALAAAAADMAGIGSTLNAANVVAAVPTTGVLAAAADEVSTQVAALLSAHAQ
CEEECCHHHHHHHHHHHHHCCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
GYQQLSRQMMTAFHDQFVQALRASADAYATAEASAAQTMVNAVNAPARALLGHPLISADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
STGGGSNALSRVQSMFLGTGGSSALGGSAAANAAASGALQLQPTGGASGLSAVGALLPRA
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCC
GAAAAAALPALAAESIGNAIKNLYNAVEPWVQYGFNLTAWAVGWLPYIGILAPQINFFYY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEE
LGEPIVQAVLFNAIDFVDGTVTFSQALTNIETATAASINQFINTEINWIRGFLPPLPPIS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PPGFPSLP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]