| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148660839
Identifier: 148660839
GI number: 148660839
Start: 1178404
End: 1178682
Strand: Direct
Name: 148660839
Synonym: MRA_1064
Alternate gene names: NA
Gene position: 1178404-1178682 (Clockwise)
Preceding gene: 148660838
Following gene: 148660840
Centisome position: 26.66
GC content: 64.52
Gene sequence:
>279_bases CTGGGCATTCGACAACGCCGGCGACCAGGTCGGGATCGAAGGCTGGTACCGCACGGTCTGGGGCACACCACGGCCTCGCT GGCGATCAGCGCAGGCGCTAACGTCAAGGTCGTGCAACGGCTCCTTGGACACGCAGCAGCGGCGATGACGCTCGACCGGC ACGGCCATCTGCTCAACGACGATCTAGCGGTGTGGCCGATGCGCTGTGCAAAGTCATCGAGAACACTGCGGTATCACTGC GGTATGCGGAGACGGAACAGAGTCGGGCTCCGGGCATGA
Upstream 100 bases:
>100_bases AGCCTGTTTGGCGCAGGCTCCATGCCGAGTTGCCCACCGACCCGAACGCCTTGGTGTTCCCCGGCCGTAAGGGCGGATTC CTGCCTCTCGGTGAATACCG
Downstream 100 bases:
>100_bases GATAGCGCGTCTGAACTGCAACGCCCCCATAGCCCAATTGGCAGAGGCAGCGGACTTAAAATCCGTCAAGTGTCGGTTCG AGTCCGACTGGGGGCACGGG
Product: putative integrase
Products: NA
Alternate protein names: Phage Integrase Family Protein
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MGIRQRRRPGRDRRLVPHGLGHTTASLAISAGANVKVVQRLLGHAAAAMTLDRHGHLLNDDLAVWPMRCAKSSRTLRYHC GMRRRNRVGLRA
Sequences:
>Translated_92_residues MGIRQRRRPGRDRRLVPHGLGHTTASLAISAGANVKVVQRLLGHAAAAMTLDRHGHLLNDDLAVWPMRCAKSSRTLRYHC GMRRRNRVGLRA >Mature_91_residues GIRQRRRPGRDRRLVPHGLGHTTASLAISAGANVKVVQRLLGHAAAAMTLDRHGHLLNDDLAVWPMRCAKSSRTLRYHCG MRRRNRVGLRA
Specific function: Unknown
COG id: COG0582
COG function: function code L; Integrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10297; Mature: 10166
Theoretical pI: Translated: 12.56; Mature: 12.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIRQRRRPGRDRRLVPHGLGHTTASLAISAGANVKVVQRLLGHAAAAMTLDRHGHLLND CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC DLAVWPMRCAKSSRTLRYHCGMRRRNRVGLRA CCCCHHHHHCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure GIRQRRRPGRDRRLVPHGLGHTTASLAISAGANVKVVQRLLGHAAAAMTLDRHGHLLND CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC DLAVWPMRCAKSSRTLRYHCGMRRRNRVGLRA CCCCHHHHHCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA