Definition Mycobacterium tuberculosis H37Ra, complete genome.
Accession NC_009525
Length 4,419,977

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The map label for this gene is 148660839

Identifier: 148660839

GI number: 148660839

Start: 1178404

End: 1178682

Strand: Direct

Name: 148660839

Synonym: MRA_1064

Alternate gene names: NA

Gene position: 1178404-1178682 (Clockwise)

Preceding gene: 148660838

Following gene: 148660840

Centisome position: 26.66

GC content: 64.52

Gene sequence:

>279_bases
CTGGGCATTCGACAACGCCGGCGACCAGGTCGGGATCGAAGGCTGGTACCGCACGGTCTGGGGCACACCACGGCCTCGCT
GGCGATCAGCGCAGGCGCTAACGTCAAGGTCGTGCAACGGCTCCTTGGACACGCAGCAGCGGCGATGACGCTCGACCGGC
ACGGCCATCTGCTCAACGACGATCTAGCGGTGTGGCCGATGCGCTGTGCAAAGTCATCGAGAACACTGCGGTATCACTGC
GGTATGCGGAGACGGAACAGAGTCGGGCTCCGGGCATGA

Upstream 100 bases:

>100_bases
AGCCTGTTTGGCGCAGGCTCCATGCCGAGTTGCCCACCGACCCGAACGCCTTGGTGTTCCCCGGCCGTAAGGGCGGATTC
CTGCCTCTCGGTGAATACCG

Downstream 100 bases:

>100_bases
GATAGCGCGTCTGAACTGCAACGCCCCCATAGCCCAATTGGCAGAGGCAGCGGACTTAAAATCCGTCAAGTGTCGGTTCG
AGTCCGACTGGGGGCACGGG

Product: putative integrase

Products: NA

Alternate protein names: Phage Integrase Family Protein

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MGIRQRRRPGRDRRLVPHGLGHTTASLAISAGANVKVVQRLLGHAAAAMTLDRHGHLLNDDLAVWPMRCAKSSRTLRYHC
GMRRRNRVGLRA

Sequences:

>Translated_92_residues
MGIRQRRRPGRDRRLVPHGLGHTTASLAISAGANVKVVQRLLGHAAAAMTLDRHGHLLNDDLAVWPMRCAKSSRTLRYHC
GMRRRNRVGLRA
>Mature_91_residues
GIRQRRRPGRDRRLVPHGLGHTTASLAISAGANVKVVQRLLGHAAAAMTLDRHGHLLNDDLAVWPMRCAKSSRTLRYHCG
MRRRNRVGLRA

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10297; Mature: 10166

Theoretical pI: Translated: 12.56; Mature: 12.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIRQRRRPGRDRRLVPHGLGHTTASLAISAGANVKVVQRLLGHAAAAMTLDRHGHLLND
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
DLAVWPMRCAKSSRTLRYHCGMRRRNRVGLRA
CCCCHHHHHCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
GIRQRRRPGRDRRLVPHGLGHTTASLAISAGANVKVVQRLLGHAAAAMTLDRHGHLLND
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
DLAVWPMRCAKSSRTLRYHCGMRRRNRVGLRA
CCCCHHHHHCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA