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The map label for this gene is lpqT

Identifier: 148660798

GI number: 148660798

Start: 1136093

End: 1136773

Strand: Reverse

Name: lpqT

Synonym: MRA_1024

Alternate gene names: 148660798

Gene position: 1136773-1136093 (Counterclockwise)

Preceding gene: 148660799

Following gene: 148660797

Centisome position: 25.72

GC content: 61.82

Gene sequence:

>681_bases
TTGGCCGGTCGACGCTGTCCGCAAGATTCTGTGAGACCCTTGGCGGTCGCGGTCGCGGTAGCCACGCTGGCAATGTCAGC
GGTCGCTTGCGGACCGAAATCGCCTGACTTCCAGTCGATTTTGTCCACGAGCCCAACCACCAGCGCCGTCTCGACCACGA
CGGAAGTGCCGGTCCCGCTGTGGAAGTATCTGGAAAGCGTCGGCGTCACCGGAGAGCCGGTGGCACCGAGCAGCCTGACC
GACCTGACCGTGTCGATTCCGACACCACCGGGCTGGGCACCGATGAAAAATCCGAACATCACCCCGAACACGGAGATGAT
CGCCAAGGGCGAAAGCTATCCAACGGCCATGCTCATGGTGTTCAAGCTGCACCGGGACTTCGATATCGCCGAAGCGCTCA
AGCATGGCACTGCCGATGCCCGGCTGTCGACGAACTTCACCGAATTGGACTCCTCGACGGCAGACTTCAACGGGTTTCCG
TCCTCGATGATTCAGGGCAGTTATGACCTGCACGGCAGGCGACTGCACACCTGGAACCGGATCGTCTTCCCAACCGGCGC
ACCGCCGGCCAAGCAGCGCTACCTGGTGCAGCTCACCATCACGAGTCTGGCCAACGAGGCCGTCAAGCACGCTTCCGACA
TCGAGGCGATCATCGCCGGATTCGTCGTCGCGGCAAAGTAA

Upstream 100 bases:

>100_bases
CCAGCACAATCCGGGCGGTCTTCGAAAACGGCTCAGTAACAGGACTTTTCGACGGGGACGCATAGATGGCAGCCGTCATC
CTTGAGGGCATCCGGCGGGC

Downstream 100 bases:

>100_bases
TTGTCCGCACGGTTGGGGCACAGCTATCCGAGCAGCTCACAAGGATCGAATTTCCCCAATGCAGTAGCCATGGGTTAGCC
TAGCCGGGCGTCACGGCGAG

Product: putative lipoprotein LpqT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MAGRRCPQDSVRPLAVAVAVATLAMSAVACGPKSPDFQSILSTSPTTSAVSTTTEVPVPLWKYLESVGVTGEPVAPSSLT
DLTVSIPTPPGWAPMKNPNITPNTEMIAKGESYPTAMLMVFKLHRDFDIAEALKHGTADARLSTNFTELDSSTADFNGFP
SSMIQGSYDLHGRRLHTWNRIVFPTGAPPAKQRYLVQLTITSLANEAVKHASDIEAIIAGFVVAAK

Sequences:

>Translated_226_residues
MAGRRCPQDSVRPLAVAVAVATLAMSAVACGPKSPDFQSILSTSPTTSAVSTTTEVPVPLWKYLESVGVTGEPVAPSSLT
DLTVSIPTPPGWAPMKNPNITPNTEMIAKGESYPTAMLMVFKLHRDFDIAEALKHGTADARLSTNFTELDSSTADFNGFP
SSMIQGSYDLHGRRLHTWNRIVFPTGAPPAKQRYLVQLTITSLANEAVKHASDIEAIIAGFVVAAK
>Mature_225_residues
AGRRCPQDSVRPLAVAVAVATLAMSAVACGPKSPDFQSILSTSPTTSAVSTTTEVPVPLWKYLESVGVTGEPVAPSSLTD
LTVSIPTPPGWAPMKNPNITPNTEMIAKGESYPTAMLMVFKLHRDFDIAEALKHGTADARLSTNFTELDSSTADFNGFPS
SMIQGSYDLHGRRLHTWNRIVFPTGAPPAKQRYLVQLTITSLANEAVKHASDIEAIIAGFVVAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPQT_MYCTU (P96384)

Other databases:

- EMBL:   BX842575
- EMBL:   AE000516
- PIR:   C70622
- RefSeq:   NP_215532.1
- RefSeq:   NP_335481.1
- ProteinModelPortal:   P96384
- EnsemblBacteria:   EBMYCT00000003172
- EnsemblBacteria:   EBMYCT00000069032
- GeneID:   886066
- GeneID:   925156
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1044
- KEGG:   mtu:Rv1016c
- TIGR:   MT1044
- TubercuList:   Rv1016c
- GeneTree:   EBGT00050000014985
- HOGENOM:   HBG569806
- OMA:   YLVQFTV
- ProtClustDB:   CLSK790893
- InterPro:   IPR019674

Pfam domain/function: PF10738 Lpp-LpqN

EC number: NA

Molecular weight: Translated: 24081; Mature: 23949

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRRCPQDSVRPLAVAVAVATLAMSAVACGPKSPDFQSILSTSPTTSAVSTTTEVPVPL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHCCCCCCCHHH
WKYLESVGVTGEPVAPSSLTDLTVSIPTPPGWAPMKNPNITPNTEMIAKGESYPTAMLMV
HHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHH
FKLHRDFDIAEALKHGTADARLSTNFTELDSSTADFNGFPSSMIQGSYDLHGRRLHTWNR
HHHHCCCCHHHHHHCCCCCCEECCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEECCCE
IVFPTGAPPAKQRYLVQLTITSLANEAVKHASDIEAIIAGFVVAAK
EEECCCCCCHHCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGRRCPQDSVRPLAVAVAVATLAMSAVACGPKSPDFQSILSTSPTTSAVSTTTEVPVPL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHCCCCCCCHHH
WKYLESVGVTGEPVAPSSLTDLTVSIPTPPGWAPMKNPNITPNTEMIAKGESYPTAMLMV
HHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHH
FKLHRDFDIAEALKHGTADARLSTNFTELDSSTADFNGFPSSMIQGSYDLHGRRLHTWNR
HHHHCCCCHHHHHHCCCCCCEECCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEECCCE
IVFPTGAPPAKQRYLVQLTITSLANEAVKHASDIEAIIAGFVVAAK
EEECCCCCCHHCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036