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The map label for this gene is 148660675

Identifier: 148660675

GI number: 148660675

Start: 1002115

End: 1003722

Strand: Reverse

Name: 148660675

Synonym: MRA_0905

Alternate gene names: NA

Gene position: 1003722-1002115 (Counterclockwise)

Preceding gene: 148660676

Following gene: 148660671

Centisome position: 22.71

GC content: 68.28

Gene sequence:

>1608_bases
ATGAGCGATCACGACAGGGACTTCGACGTTGTCGTGGTTGGCGGCGGTCACAACGGCTTGGTCGCGGCCGCCTACCTGGC
CCGGGCCGGGCTTCGAGTGCGACTGCTCGAGCGGCTGGCACAGACTGGGGGGGCCGCGGTGTCGATACAGGCCTTCGACG
GTGTCGAGGTCGCGCTGTCACGCTACTCGTACCTGGTCAGCTTGCTGCCGTCGCGCATCGTCGCCGACCTCGGCGCTCCG
GTGCGGTTGGCGCGGCGGCCATTTTCCTCATACACCCCTGCCCCAGCCACGGCCGGGCGCTCTGGCCTGCTCATCGGGCC
CACCGGCGAACCACGCGCAGCGCACCTCGCGGCGATCGGCGCCGCGCCGGATGCGCACGGCTTCGCCGCGTTCTACCGGC
GCTGCCGGCTGGTGACCGCACGGCTGTGGCCCACCCTGATCGAGCCGCTGCGCACCCGCGAGCAGGCCCGCCGCGACATT
GTGGAATACGGCGGCCACGAGGCGGCCGCTGCCTGGCAAGCCATGGTCGACGAGCCGATCGGGCATGCCATCGCCGGCGC
GGTGGCCAATGACCTGCTACGCGGGGTGATCGCCACCGACGCGCTGATCGGCACCTTCGCCCGCATGCACGAACCGTCGC
TGATGCAGAACATCTGCTTCCTGTATCACCTGGTCGGTGGGGGCACCGGAGTCTGGCACGTCCCAATCGGCGGCATGGGG
TCGGTGACCTCGGCCCTGGCCACGGCAGCTGCCCGCCACGGCGCCGAAATAGTCACCGGTGCAGACGTTTTCGCCCTTGA
TCCAGACGGTACGGTGCGCTACCACAGCGACGGTAGCGACGGTGCCGAGCATTTGGTCCGGGGCCGGTTCGTTCTGGTCG
GGGTCACACCGGCGGTGCTGGCCAGCCTGCTCGGTGAACCGGTTGCGGCACTGGCCCCGGGCGCACAGGTCAAGGTCAAC
ATGGTGGTGCGCCGACTCCCCCGGTTGCGCGACGACAGTGTCACACCGCAGCAAGCATTTGCCGGGACGTTCCACGTCAA
CGAGACATGGAGCCAATTGGATGCCGCGTACTCGCAAGCAGCCAGCGGGCGGTTGCCGGATCCCCTACCCTGCGAAGCCT
ACTGCCATTCGCTGACCGACCCGAGCATCCTGTCCGCCCGGTTGCGCGATGCCGGCGCTCAGACGCTGACGGTGTTCGGC
TTGCACACACCGCACTCGGTGTTCGGCGACACCGAAGGCTTAGCCGAACGGCTGACGGCAGCCGTCCTAGCGTCGCTGAA
TTCCGTTCTGGCCGAACCGATTCAGGACGTGCTTTGGACCGATGCGCAGAGCAAGCCATGCATCGAGACGACGACCACCC
TGGACCTGCAGCGGACGCTTGGGATGACCGGCGGCAACATCTTCCACGGTGCGTTGTCCTGGCCGTTCGCTGACAACGAC
GATCCGCTGGACACACCGGCACGGCAGTGGGGCGTAGCCACCGACCACGAGCGGATCATGCTGTGCGGCTCGGGTGCCCG
TCGCGGCGGGGCGGTGTCGGGCATCGGCGGTCACAACGCCGCGATGGCAGTGCTGGCTTGCCTGGCGAGCAGACGCAAAA
GCCCCTAA

Upstream 100 bases:

>100_bases
TTGCGCCAAACCGGTGGTGACCCGCGCGAAGCAGTCGTGCGTCCCGCCGACCAAGTCGAGGGGTACACCGGCTAGATCCG
TCTCGATAGCCGCCGTCACT

Downstream 100 bases:

>100_bases
TACCTGCCGGTTTAGGGGGCTTTTGCGTCTGCTCGCCGGCCTACCGCGCGTCTATGGTGACGTAGTCGCGCTCCGTGTAG
CCGGTGTAGATCTGGCGGGG

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MSDHDRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSIQAFDGVEVALSRYSYLVSLLPSRIVADLGAP
VRLARRPFSSYTPAPATAGRSGLLIGPTGEPRAAHLAAIGAAPDAHGFAAFYRRCRLVTARLWPTLIEPLRTREQARRDI
VEYGGHEAAAAWQAMVDEPIGHAIAGAVANDLLRGVIATDALIGTFARMHEPSLMQNICFLYHLVGGGTGVWHVPIGGMG
SVTSALATAAARHGAEIVTGADVFALDPDGTVRYHSDGSDGAEHLVRGRFVLVGVTPAVLASLLGEPVAALAPGAQVKVN
MVVRRLPRLRDDSVTPQQAFAGTFHVNETWSQLDAAYSQAASGRLPDPLPCEAYCHSLTDPSILSARLRDAGAQTLTVFG
LHTPHSVFGDTEGLAERLTAAVLASLNSVLAEPIQDVLWTDAQSKPCIETTTTLDLQRTLGMTGGNIFHGALSWPFADND
DPLDTPARQWGVATDHERIMLCGSGARRGGAVSGIGGHNAAMAVLACLASRRKSP

Sequences:

>Translated_535_residues
MSDHDRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSIQAFDGVEVALSRYSYLVSLLPSRIVADLGAP
VRLARRPFSSYTPAPATAGRSGLLIGPTGEPRAAHLAAIGAAPDAHGFAAFYRRCRLVTARLWPTLIEPLRTREQARRDI
VEYGGHEAAAAWQAMVDEPIGHAIAGAVANDLLRGVIATDALIGTFARMHEPSLMQNICFLYHLVGGGTGVWHVPIGGMG
SVTSALATAAARHGAEIVTGADVFALDPDGTVRYHSDGSDGAEHLVRGRFVLVGVTPAVLASLLGEPVAALAPGAQVKVN
MVVRRLPRLRDDSVTPQQAFAGTFHVNETWSQLDAAYSQAASGRLPDPLPCEAYCHSLTDPSILSARLRDAGAQTLTVFG
LHTPHSVFGDTEGLAERLTAAVLASLNSVLAEPIQDVLWTDAQSKPCIETTTTLDLQRTLGMTGGNIFHGALSWPFADND
DPLDTPARQWGVATDHERIMLCGSGARRGGAVSGIGGHNAAMAVLACLASRRKSP
>Mature_534_residues
SDHDRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSIQAFDGVEVALSRYSYLVSLLPSRIVADLGAPV
RLARRPFSSYTPAPATAGRSGLLIGPTGEPRAAHLAAIGAAPDAHGFAAFYRRCRLVTARLWPTLIEPLRTREQARRDIV
EYGGHEAAAAWQAMVDEPIGHAIAGAVANDLLRGVIATDALIGTFARMHEPSLMQNICFLYHLVGGGTGVWHVPIGGMGS
VTSALATAAARHGAEIVTGADVFALDPDGTVRYHSDGSDGAEHLVRGRFVLVGVTPAVLASLLGEPVAALAPGAQVKVNM
VVRRLPRLRDDSVTPQQAFAGTFHVNETWSQLDAAYSQAASGRLPDPLPCEAYCHSLTDPSILSARLRDAGAQTLTVFGL
HTPHSVFGDTEGLAERLTAAVLASLNSVLAEPIQDVLWTDAQSKPCIETTTTLDLQRTLGMTGGNIFHGALSWPFADNDD
PLDTPARQWGVATDHERIMLCGSGARRGGAVSGIGGHNAAMAVLACLASRRKSP

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=584, Percent_Identity=28.2534246575343, Blast_Score=139, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI17540238, Length=555, Percent_Identity=28.2882882882883, Blast_Score=156, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y897_MYCTU (P64751)

Other databases:

- EMBL:   BX842574
- EMBL:   AE000516
- PIR:   F70782
- RefSeq:   NP_215412.1
- RefSeq:   NP_335353.1
- ProteinModelPortal:   P64751
- SMR:   P64751
- EnsemblBacteria:   EBMYCT00000000744
- EnsemblBacteria:   EBMYCT00000072068
- GeneID:   885641
- GeneID:   926235
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT0921
- KEGG:   mtu:Rv0897c
- TIGR:   MT0921
- TubercuList:   Rv0897c
- GeneTree:   EBGT00050000016553
- HOGENOM:   HBG691931
- OMA:   GRPCIET
- ProtClustDB:   CLSK790816

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56234; Mature: 56103

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1cd610b0)-; HASH(0x1af46f20)-;

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDHDRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSIQAFDGVEVALS
CCCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHH
RYSYLVSLLPSRIVADLGAPVRLARRPFSSYTPAPATAGRSGLLIGPTGEPRAAHLAAIG
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHEEEEC
AAPDAHGFAAFYRRCRLVTARLWPTLIEPLRTREQARRDIVEYGGHEAAAAWQAMVDEPI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GHAIAGAVANDLLRGVIATDALIGTFARMHEPSLMQNICFLYHLVGGGTGVWHVPIGGMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH
SVTSALATAAARHGAEIVTGADVFALDPDGTVRYHSDGSDGAEHLVRGRFVLVGVTPAVL
HHHHHHHHHHHHCCCEEEECCEEEEECCCCCEEECCCCCHHHHHHHCCCEEEEECCHHHH
ASLLGEPVAALAPGAQVKVNMVVRRLPRLRDDSVTPQQAFAGTFHVNETWSQLDAAYSQA
HHHHCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCEEEECCHHHHHHHHHHHHH
ASGRLPDPLPCEAYCHSLTDPSILSARLRDAGAQTLTVFGLHTPHSVFGDTEGLAERLTA
HCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHCCCHHHHHHHHHH
AVLASLNSVLAEPIQDVLWTDAQSKPCIETTTTLDLQRTLGMTGGNIFHGALSWPFADND
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCEECCCCCCC
DPLDTPARQWGVATDHERIMLCGSGARRGGAVSGIGGHNAAMAVLACLASRRKSP
CCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
SDHDRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSIQAFDGVEVALS
CCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHH
RYSYLVSLLPSRIVADLGAPVRLARRPFSSYTPAPATAGRSGLLIGPTGEPRAAHLAAIG
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHEEEEC
AAPDAHGFAAFYRRCRLVTARLWPTLIEPLRTREQARRDIVEYGGHEAAAAWQAMVDEPI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GHAIAGAVANDLLRGVIATDALIGTFARMHEPSLMQNICFLYHLVGGGTGVWHVPIGGMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH
SVTSALATAAARHGAEIVTGADVFALDPDGTVRYHSDGSDGAEHLVRGRFVLVGVTPAVL
HHHHHHHHHHHHCCCEEEECCEEEEECCCCCEEECCCCCHHHHHHHCCCEEEEECCHHHH
ASLLGEPVAALAPGAQVKVNMVVRRLPRLRDDSVTPQQAFAGTFHVNETWSQLDAAYSQA
HHHHCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCEEEECCHHHHHHHHHHHHH
ASGRLPDPLPCEAYCHSLTDPSILSARLRDAGAQTLTVFGLHTPHSVFGDTEGLAERLTA
HCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHCCCHHHHHHHHHH
AVLASLNSVLAEPIQDVLWTDAQSKPCIETTTTLDLQRTLGMTGGNIFHGALSWPFADND
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCEECCCCCCC
DPLDTPARQWGVATDHERIMLCGSGARRGGAVSGIGGHNAAMAVLACLASRRKSP
CCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036