| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148660651
Identifier: 148660651
GI number: 148660651
Start: 973852
End: 975012
Strand: Reverse
Name: 148660651
Synonym: MRA_0881
Alternate gene names: NA
Gene position: 975012-973852 (Counterclockwise)
Preceding gene: 148660652
Following gene: 148660649
Centisome position: 22.06
GC content: 70.46
Gene sequence:
>1161_bases GTGCGGATCGGAGTCGGGGTTTGCACCACGCCCGACGCGCGGCAGGCCGCGGTGGAGGCTGCGGGCCAGGCGCGCGACGA GCTGGCGGGTGAGGCGCCGTCGCTGGCGGTGTTGCTTGGATCGCGTGCACACACCGACCGGGCTGCCGACGTCCTGAGCG CGGTGCTGCAGATGATCGATCCGCCCGCGCTTGTCGGTTGCATCGCCCAGGCCATCGTCGCCGGCCGCCACGAGATCGAG GACGAGCCCGCGGTGGTGGTGTGGCTGGCGTCCGGCTTGGCCGCCGAGACATTCCAGCTGGACTTTGTCCGTACCGGCTC GGGTGCCCTGATCACCGGTTATCGGTTCGACCGCACCGCCCGGGATCTGCATCTGCTGCTGCCGGACCCGTACACATTCC CGTCGAACCTGCTCATCGAGCACCCCAACACCGACCTGCCGGGCACCGCCGTCGTGGGCGGCGTGGTGAGCGGCGGGCGC CGGCGGGGCGACACCCGGCTGTTCCGCGATCACGACGTGCTCACCTCCGGCGTCGTCGGCGTGCGCCTGCCCGGGATGCG CGGTGTCCCGGTCGTGTCGCAGGGTTGCCGGCCGATCGGCTACCCATACATCGTCACCGGCGCGGACGGCATACTGATCA CCGAGCTCGGCGGCCGTCCGCCGTTGCAGCGACTGCGTGAGATCGTCGAGGGGCTGTCGCCCGACGAAAGGGCACTCGTC AGCCACGGCCTACAGATCGGGATCGTCGTCGACGAGCACCTGGCGGCTCCGGGTCAGGGCGATTTCGTGATCCGCGGGCT GCTCGGCGCCGACCCGTCGACCGGGTCGATCGAGATCGACGAGGTTGTCCAGGTCGGCGCCACCATGCAGTTCCAGGTCC GTGACGCGGCCGGGGCCGACAAGGACCTACGCCTGACCGTGGAGCGGGCCGCGGCGCGGCTGCCCGGACGCGCGGCTGGA GCGCTGTTGTTCACCTGCAACGGGCGGGGGCGGCGGATGTTCGGGGTCGCCGACCACGACGCGTCGACGATCGAGGAACT CCTAGGCGGAATTCCGCTTGCCGGCTTCTTCGCCGCCGGAGAGATCGGCCCGATCGCGGGCCGCAATGCCCTGCACGGAT TCACCGCATCGATGGCGCTGTTTGTCGACGACATGGAATAG
Upstream 100 bases:
>100_bases ACGAGGCCGCGGCTCGACGGCCGACCGCGCTTAAGCGCGGTCGGCGCCAACGGTCCGAAGAGCCGCCGACACCCGGGGCA CATCGGCGCATCATGGAACT
Downstream 100 bases:
>100_bases AACCTGCACCCAGACGCGATACGCGCCAGCGTGGTACCCGACGAGACTCGGGCGGTCCCCCGCGGACGTGACCGGCCACG CGGGCGCCCTAAAGTTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MRIGVGVCTTPDARQAAVEAAGQARDELAGEAPSLAVLLGSRAHTDRAADVLSAVLQMIDPPALVGCIAQAIVAGRHEIE DEPAVVVWLASGLAAETFQLDFVRTGSGALITGYRFDRTARDLHLLLPDPYTFPSNLLIEHPNTDLPGTAVVGGVVSGGR RRGDTRLFRDHDVLTSGVVGVRLPGMRGVPVVSQGCRPIGYPYIVTGADGILITELGGRPPLQRLREIVEGLSPDERALV SHGLQIGIVVDEHLAAPGQGDFVIRGLLGADPSTGSIEIDEVVQVGATMQFQVRDAAGADKDLRLTVERAAARLPGRAAG ALLFTCNGRGRRMFGVADHDASTIEELLGGIPLAGFFAAGEIGPIAGRNALHGFTASMALFVDDME
Sequences:
>Translated_386_residues MRIGVGVCTTPDARQAAVEAAGQARDELAGEAPSLAVLLGSRAHTDRAADVLSAVLQMIDPPALVGCIAQAIVAGRHEIE DEPAVVVWLASGLAAETFQLDFVRTGSGALITGYRFDRTARDLHLLLPDPYTFPSNLLIEHPNTDLPGTAVVGGVVSGGR RRGDTRLFRDHDVLTSGVVGVRLPGMRGVPVVSQGCRPIGYPYIVTGADGILITELGGRPPLQRLREIVEGLSPDERALV SHGLQIGIVVDEHLAAPGQGDFVIRGLLGADPSTGSIEIDEVVQVGATMQFQVRDAAGADKDLRLTVERAAARLPGRAAG ALLFTCNGRGRRMFGVADHDASTIEELLGGIPLAGFFAAGEIGPIAGRNALHGFTASMALFVDDME >Mature_386_residues MRIGVGVCTTPDARQAAVEAAGQARDELAGEAPSLAVLLGSRAHTDRAADVLSAVLQMIDPPALVGCIAQAIVAGRHEIE DEPAVVVWLASGLAAETFQLDFVRTGSGALITGYRFDRTARDLHLLLPDPYTFPSNLLIEHPNTDLPGTAVVGGVVSGGR RRGDTRLFRDHDVLTSGVVGVRLPGMRGVPVVSQGCRPIGYPYIVTGADGILITELGGRPPLQRLREIVEGLSPDERALV SHGLQIGIVVDEHLAAPGQGDFVIRGLLGADPSTGSIEIDEVVQVGATMQFQVRDAAGADKDLRLTVERAAARLPGRAAG ALLFTCNGRGRRMFGVADHDASTIEELLGGIPLAGFFAAGEIGPIAGRNALHGFTASMALFVDDME
Specific function: Unknown
COG id: COG4398
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0628c
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y874_MYCTU (P0A5D3)
Other databases:
- EMBL: BX842574 - EMBL: AE000516 - PIR: G70779 - RefSeq: NP_215389.1 - RefSeq: NP_335325.1 - EnsemblBacteria: EBMYCT00000002784 - EnsemblBacteria: EBMYCT00000072389 - GeneID: 885658 - GeneID: 926207 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0897 - KEGG: mtu:Rv0874c - TIGR: MT0897 - TubercuList: Rv0874c - GeneTree: EBGT00050000018408 - HOGENOM: HBG292420 - OMA: IMAKDDE - ProtClustDB: CLSK790643 - InterPro: IPR019494 - InterPro: IPR013702 - InterPro: IPR016741 - PIRSF: PIRSF018953 - SMART: SM00897
Pfam domain/function: PF08495 FIST; PF10442 FIST_C
EC number: NA
Molecular weight: Translated: 40403; Mature: 40403
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1cbf20d0)-; HASH(0x1c40ce88)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGVGVCTTPDARQAAVEAAGQARDELAGEAPSLAVLLGSRAHTDRAADVLSAVLQMID CEEECEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC PPALVGCIAQAIVAGRHEIEDEPAVVVWLASGLAAETFQLDFVRTGSGALITGYRFDRTA CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCC RDLHLLLPDPYTFPSNLLIEHPNTDLPGTAVVGGVVSGGRRRGDTRLFRDHDVLTSGVVG CCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEECCHHHHCCEEE VRLPGMRGVPVVSQGCRPIGYPYIVTGADGILITELGGRPPLQRLREIVEGLSPDERALV EECCCCCCCCHHHCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHH SHGLQIGIVVDEHLAAPGQGDFVIRGLLGADPSTGSIEIDEVVQVGATMQFQVRDAAGAD HCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHCCCEEEEEEECCCCCC KDLRLTVERAAARLPGRAAGALLFTCNGRGRRMFGVADHDASTIEELLGGIPLAGFFAAG CCEEEEHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHCC EIGPIAGRNALHGFTASMALFVDDME CCCCCCCCCHHHHHHEEEEEEEECCH >Mature Secondary Structure MRIGVGVCTTPDARQAAVEAAGQARDELAGEAPSLAVLLGSRAHTDRAADVLSAVLQMID CEEECEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC PPALVGCIAQAIVAGRHEIEDEPAVVVWLASGLAAETFQLDFVRTGSGALITGYRFDRTA CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCC RDLHLLLPDPYTFPSNLLIEHPNTDLPGTAVVGGVVSGGRRRGDTRLFRDHDVLTSGVVG CCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEECCHHHHCCEEE VRLPGMRGVPVVSQGCRPIGYPYIVTGADGILITELGGRPPLQRLREIVEGLSPDERALV EECCCCCCCCHHHCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHH SHGLQIGIVVDEHLAAPGQGDFVIRGLLGADPSTGSIEIDEVVQVGATMQFQVRDAAGAD HCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHCCCEEEEEEECCCCCC KDLRLTVERAAARLPGRAAGALLFTCNGRGRRMFGVADHDASTIEELLGGIPLAGFFAAG CCEEEEHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHCC EIGPIAGRNALHGFTASMALFVDDME CCCCCCCCCHHHHHHEEEEEEEECCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036