| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is lpqS
Identifier: 148660624
GI number: 148660624
Start: 945649
End: 946041
Strand: Direct
Name: lpqS
Synonym: MRA_0855
Alternate gene names: NA
Gene position: 945649-946041 (Clockwise)
Preceding gene: 148660622
Following gene: 148660625
Centisome position: 21.39
GC content: 69.47
Gene sequence:
>393_bases GTGGTGTGGATGCGATCGGCGATTGTCGCGGTCGCGCTGGGGGTGACGGTAGCCGCCGTCGCCGCTGCATGCTGGCTCCC CCAGCTCCACCGTCATGTGGCTCACCCAAACCACCCGTTGACGACGTCCGTAGGTAGCGAATTCGTCATCAACACCGACC ACGGGCACCTGGTGGACAACTCGATGCCACCGTGCCCGGAACGGCTCGCGACGGCGGTGCTGCCGCGCTCCGCCACTCCG GTGTTACTACCAGACGTCGTGGCGGCTGCGCCCGGCATGACAGCCGCGCTTACCGACCCCGTCGCGCCGGCCGCGCGCGG TCCGCCGGCGGCGCAGGGATCCGTTCGCACCGGTCAAGACCTGTTGACCCGGTTCTGCCTGGCTCGTCGCTGA
Upstream 100 bases:
>100_bases ACATCGGGCAGTACGCAACGGTTGATGATCACCACGCCATCATCCGCCCTTACACCCTACCCCTATAGGGTATATAGTGG GCCACGTGGAAAGCGGGCAC
Downstream 100 bases:
>100_bases GGGGTCAGCGCCAGGCGGTGGTGGCCATTCGCCATCGCCGGTGACCGCTGACCCCCATCCAGTGCCGCGTGTGACTTCCG GCCCCGATGCAGAAGCGACG
Product: putative lipoprotein LpqS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MVWMRSAIVAVALGVTVAAVAAACWLPQLHRHVAHPNHPLTTSVGSEFVINTDHGHLVDNSMPPCPERLATAVLPRSATP VLLPDVVAAAPGMTAALTDPVAPAARGPPAAQGSVRTGQDLLTRFCLARR
Sequences:
>Translated_130_residues MVWMRSAIVAVALGVTVAAVAAACWLPQLHRHVAHPNHPLTTSVGSEFVINTDHGHLVDNSMPPCPERLATAVLPRSATP VLLPDVVAAAPGMTAALTDPVAPAARGPPAAQGSVRTGQDLLTRFCLARR >Mature_130_residues MVWMRSAIVAVALGVTVAAVAAACWLPQLHRHVAHPNHPLTTSVGSEFVINTDHGHLVDNSMPPCPERLATAVLPRSATP VLLPDVVAAAPGMTAALTDPVAPAARGPPAAQGSVRTGQDLLTRFCLARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13519; Mature: 13519
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWMRSAIVAVALGVTVAAVAAACWLPQLHRHVAHPNHPLTTSVGSEFVINTDHGHLVDN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC SMPPCPERLATAVLPRSATPVLLPDVVAAAPGMTAALTDPVAPAARGPPAAQGSVRTGQD CCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHH LLTRFCLARR HHHHHHHHCC >Mature Secondary Structure MVWMRSAIVAVALGVTVAAVAAACWLPQLHRHVAHPNHPLTTSVGSEFVINTDHGHLVDN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC SMPPCPERLATAVLPRSATPVLLPDVVAAAPGMTAALTDPVAPAARGPPAAQGSVRTGQD CCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHH LLTRFCLARR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA