| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is lpqQ
Identifier: 148660612
GI number: 148660612
Start: 932259
End: 932903
Strand: Direct
Name: lpqQ
Synonym: MRA_0843
Alternate gene names: NA
Gene position: 932259-932903 (Clockwise)
Preceding gene: 148660610
Following gene: 148660615
Centisome position: 21.09
GC content: 61.86
Gene sequence:
>645_bases GTGTGTTGCTCCACTGCTGCCAAGTCGGCCGTCATCGTCTGCTGTGCGGCCATCGCGACCACGGCATGCTCGTTTCAAGC CACATCGACCCAGCCGAGCACCGCACCCCCGACATCGCGGGTCGATTCGTTGATCGTCAGCATCGAAGACGTACGGCGCA TCGCCAACTATGAGGAGCTCGCCGCACATTTTCAGACCGACTTGCGTGAACCGCCGGAGGCGGACACGAACGTTCCGGGC CCCTGTCGTGTGGTGGGCAGCAGTGATCGCACCTTCGGAACCGACTGGTCAGAGTTCCGTAGCGCGGGTTACCACGGCGT TACCGACGACCTCAGACCGGGCGGGCCGGTCATGGTCGAGACGGTTAGCCAGGCGATAGCGCTGTACCCGGACCCGAGTA CGGCGCGCGGTGTGTTCCATCGGCTCGAGTCGTCGCTGGCAGAATGTGCTGGCTTGCATGACCCCTACTTCGATTTCATC CTCGACAGGCCGGACGCCTCCACCGTGAGGATCGGCGCTGCGGGTTGGAGTCATGTGTATCGCCTGAAATCGTCGGTATT CATATCCGTTGGCGTGTTGGGTATTGAACCGGCAGAGCCGATCGCCAACGTCATCTTGCAGACGATCAGCGATCGCATCC AGTAG
Upstream 100 bases:
>100_bases CGGACGCCAGTCCGCAGAAGCCGGCTTATCGACAATGAGGCCAAAGAGCTCAACCCGTCAGCGGACATGTGGCGCGCGCT GGCCAGTGTGGCGATCAGTC
Downstream 100 bases:
>100_bases TTAGCCGAGGACTGGAAAGCAGCAGCGGCGGCGACGAGCGCAGCGTGTTGAGGGCTGTTGACGCCACGACGCCCACCGTT GCGAAGAAGAAGGCGAGAAG
Product: putative lipoprotein LpqQ
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEELAAHFQTDLREPPEADTNVPG PCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFI LDRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ
Sequences:
>Translated_214_residues MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEELAAHFQTDLREPPEADTNVPG PCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFI LDRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ >Mature_214_residues MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEELAAHFQTDLREPPEADTNVPG PCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFI LDRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22903; Mature: 22903
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEEL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH AAHFQTDLREPPEADTNVPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVE HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHH TVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFILDRPDASTVRIGAAGWSHVY HHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCEEEEECCCHHHHH RLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ HHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEEL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH AAHFQTDLREPPEADTNVPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVE HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHH TVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFILDRPDASTVRIGAAGWSHVY HHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCEEEEECCCHHHHH RLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ HHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA