| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148660125
Identifier: 148660125
GI number: 148660125
Start: 438881
End: 439660
Strand: Direct
Name: 148660125
Synonym: MRA_0368
Alternate gene names: NA
Gene position: 438881-439660 (Clockwise)
Preceding gene: 148660124
Following gene: 148660127
Centisome position: 9.93
GC content: 67.56
Gene sequence:
>780_bases GTGAGCGAGACGGGCCAGCGCGAGTCGGTGCGACCCAGCCCGATCTTTCTGGGCCTGCTCGGATTGACGGCCGTCGGGGG CGCGCTGGCCTGGCTGGCCGGGGAGACGGTGCAGCCGCTGGCCTACGCCGGGGTGTTCGTCATGGTGATCGCCGGCTGGC TGGTGTCGCTGTGCCTGCACGAGTTCGGTCACGCGTTCACCGCTTGGCGTTTCGGTGACCACGACGTCGCAGTGCGCGGC TACCTGACGCTGGATCCCCGCCGCTACAGCCATCCCATGCTCTCGCTCGGTCTGCCGATGCTGTTCATCGCCCTGGGCGG GATCGGTCTGCCGGGTGCCGCGGTGTATGTGCACACCTGGTTCATGACGACGGCGCGCCGCACCCTGGTCAGTTTGGCGG GGCCGACGGTCAACCTGGCGCTGGCCATGTTGCTGCTGGCGGCGACCCGGTTGTTGTTCGACCCGATCCACGCGGTGTTA TGGGCCGGGGTGGCGTTCCTAGCATTCCTTCAGCTCACCGCGCTGGTGTTAAACCTGCTACCCATCCCGGGTCTGGACGG CTATGCGGCCCTGGAGCCGCACCTGAGACCCGAGACGCAGCGCGCCCTGGCGCCGGCCAAGCAGTTCGCTTTGGTGTTTC TGCTGGTCCTGTTCCTGGCGCCGACGCTGAACGGGTGGTTTTTCGGGGTGGTGTACTGGCTCTTCGACCTGTCTGGCGTG TCGCACCGGCTGGCCGCCGCGGGCAGCGTGCTGGCCCGTTTCTGGAGTATCTGGTTCTGA
Upstream 100 bases:
>100_bases GCGGTACTTCGGGACGGTGTCGCGGCGCCCCGCCCGGTGCGCCGATCGACGTTTTACCGCAACGTCGAGGGTTGGCTGCT GGTCCGGTAGTTTTCGACCG
Downstream 100 bases:
>100_bases CCGTTCAGAGCCCAAGCGCCGGACGGGCCGCGGGGTCACAGTCGTCAAGCAGATCCAGGCAGCGTCCATACTCGTCGGTC TCGCCGATAGCGGCTGCGGC
Product: putative integral membrane protein
Products: NA
Alternate protein names: Peptidase; M50B Family Peptidase; M50 Family Peptidase; LOW QUALITY PROTEIN Integral Membrane Protein; Metallopeptidase; Integral Membrane Protein; Zn-Dependent Protease; Conserved Membrane Protein; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSETGQRESVRPSPIFLGLLGLTAVGGALAWLAGETVQPLAYAGVFVMVIAGWLVSLCLHEFGHAFTAWRFGDHDVAVRG YLTLDPRRYSHPMLSLGLPMLFIALGGIGLPGAAVYVHTWFMTTARRTLVSLAGPTVNLALAMLLLAATRLLFDPIHAVL WAGVAFLAFLQLTALVLNLLPIPGLDGYAALEPHLRPETQRALAPAKQFALVFLLVLFLAPTLNGWFFGVVYWLFDLSGV SHRLAAAGSVLARFWSIWF
Sequences:
>Translated_259_residues MSETGQRESVRPSPIFLGLLGLTAVGGALAWLAGETVQPLAYAGVFVMVIAGWLVSLCLHEFGHAFTAWRFGDHDVAVRG YLTLDPRRYSHPMLSLGLPMLFIALGGIGLPGAAVYVHTWFMTTARRTLVSLAGPTVNLALAMLLLAATRLLFDPIHAVL WAGVAFLAFLQLTALVLNLLPIPGLDGYAALEPHLRPETQRALAPAKQFALVFLLVLFLAPTLNGWFFGVVYWLFDLSGV SHRLAAAGSVLARFWSIWF >Mature_258_residues SETGQRESVRPSPIFLGLLGLTAVGGALAWLAGETVQPLAYAGVFVMVIAGWLVSLCLHEFGHAFTAWRFGDHDVAVRGY LTLDPRRYSHPMLSLGLPMLFIALGGIGLPGAAVYVHTWFMTTARRTLVSLAGPTVNLALAMLLLAATRLLFDPIHAVLW AGVAFLAFLQLTALVLNLLPIPGLDGYAALEPHLRPETQRALAPAKQFALVFLLVLFLAPTLNGWFFGVVYWLFDLSGVS HRLAAAGSVLARFWSIWF
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28122; Mature: 27990
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETGQRESVRPSPIFLGLLGLTAVGGALAWLAGETVQPLAYAGVFVMVIAGWLVSLCLH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EFGHAFTAWRFGDHDVAVRGYLTLDPRRYSHPMLSLGLPMLFIALGGIGLPGAAVYVHTW HHCCHHHHEEECCCCEEEEEEEEECCHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH FMTTARRTLVSLAGPTVNLALAMLLLAATRLLFDPIHAVLWAGVAFLAFLQLTALVLNLL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PIPGLDGYAALEPHLRPETQRALAPAKQFALVFLLVLFLAPTLNGWFFGVVYWLFDLSGV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCH SHRLAAAGSVLARFWSIWF HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SETGQRESVRPSPIFLGLLGLTAVGGALAWLAGETVQPLAYAGVFVMVIAGWLVSLCLH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EFGHAFTAWRFGDHDVAVRGYLTLDPRRYSHPMLSLGLPMLFIALGGIGLPGAAVYVHTW HHCCHHHHEEECCCCEEEEEEEEECCHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH FMTTARRTLVSLAGPTVNLALAMLLLAATRLLFDPIHAVLWAGVAFLAFLQLTALVLNLL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PIPGLDGYAALEPHLRPETQRALAPAKQFALVFLLVLFLAPTLNGWFFGVVYWLFDLSGV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCH SHRLAAAGSVLARFWSIWF HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA