| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148660097
Identifier: 148660097
GI number: 148660097
Start: 397563
End: 398729
Strand: Direct
Name: 148660097
Synonym: MRA_0340
Alternate gene names: NA
Gene position: 397563-398729 (Clockwise)
Preceding gene: 148660094
Following gene: 148660098
Centisome position: 8.99
GC content: 66.41
Gene sequence:
>1167_bases ATGAGCAAGACGGTTCTCATCCTTGGCGCGGGTGTCGGCGGCCTGACCACCGCCGACACCCTCCGTCAACTGCTACCACC TGAGGATCGAATCATATTGGTGGACAGGAGCTTTGACGGGACGCTGGGCTTGTCGTTGCTATGGGTGTTGCGGGGCTGGC GGCGGCCTGACGACGTCCGCGTCCGCCCCACCGCGGCGTCGCTGCCCGGTGTGGAAATGGTTACTGCAACCGTCGCCCAC ATTGACATCGCGGCCCAGGTAGTGCACACCGACAACAGCGTCATCGGCTATGACGCGTTGGTGATCGCATTAGGTGCGGC GCTGAACACCGACGCCGTTCCCGGACTGTCGGACGCGCTCGACGCCGACGTCGCGGGCCAGTTCTACACCCTGGACGGCG CGGCTGAGCTGCGTGCGAAGGTCGAGGCGCTCGAGCATGGCCGGATCGCTGTGGCTATCGCCGGGGTGCCGTTCAAATGC CCAGCCGCACCGTTCGAAGCGGCGTTTCTGATCGCCGCCCAACTCGGTGACCGCTACGCCACCGGAACCGTACAGATCGA CACGTTCACGCCTGACCCGCTGCCGATGCCCGTTGCAGGTCCCGAGGTCGGCGAGGCTTTGGTCTCGATGCTCAAGGATC ACGGTGTCGGCTTCCATCCTCGCAAGGCCCTAGCTCGCGTCGATGAGGCCGCAAGGACGATGCACTTCGGTGACGGCACG TCCGAACCGTTCGATCTGCTTGCCGTGGTCCCCCCGCACGTGCCCTCCGCCGCGGCGCGGTCAGCGGGTCTCAGCGAATC CGGGTGGATACCCGTGGACCCGCGCACCCTGTCCACTAGCGCCGACAACGTGTGGGCCATCGGCGATGCGACCGTGCTGA CGCTGCCGAATGGCAAACCGCTGCCCAAGGCTGCCGTGTTCGCCGAAGCCCAGGCCGCAGTTGTCGCCCACGGCGTCGCC CGCCATCTCGGTTACGACGTAGCTGAGCGCCACTTCACCGGCACGGGCGCCTGCTACGTCGAGACCGGTGATCACCAGGC AGCCAAGGGCGACGGCGATTTCTTCGCTCCGTCGGCGCCCTCGGTGACGCTGTACCCGCCGTCGCGGGAGTTTCACGAGG AGAAGGTCGCACAAGAACTGGCCTGGCTGACCCGCTGGAAGACGTGA
Upstream 100 bases:
>100_bases TTTGACTGACTCGGTCAGTCACCCCAAGACCTTGCGCAAGACTGCGGCGGAATCTAATATTCCAAAGATATATGGAACTC GATGCGAAGGAATCAGGCTC
Downstream 100 bases:
>100_bases CACGCCGGTGGGCGCGGCCCCCTACCACGGCTCCTACCGGCGCCCCTGAAACACCAGACTGTGGATAACCGCTGTTGCGC AAGCCTGCTAGTAGCCTCGC
Product: putative phage tail component protein
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein Subunit; Sulfide Dehydrogenase; Oxidoreductase; Flavoprotein Reductase; NADH Dehydrogenase FAD-Containing Subunit; NAD(FAD)-Dependent Dehydrogenase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Flavoprotein Reductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Dehydrogenase; Sulfide Dehydrogenase Related Protein; Dehydrogenase/Reductase
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVRVRPTAASLPGVEMVTATVAH IDIAAQVVHTDNSVIGYDALVIALGAALNTDAVPGLSDALDADVAGQFYTLDGAAELRAKVEALEHGRIAVAIAGVPFKC PAAPFEAAFLIAAQLGDRYATGTVQIDTFTPDPLPMPVAGPEVGEALVSMLKDHGVGFHPRKALARVDEAARTMHFGDGT SEPFDLLAVVPPHVPSAAARSAGLSESGWIPVDPRTLSTSADNVWAIGDATVLTLPNGKPLPKAAVFAEAQAAVVAHGVA RHLGYDVAERHFTGTGACYVETGDHQAAKGDGDFFAPSAPSVTLYPPSREFHEEKVAQELAWLTRWKT
Sequences:
>Translated_388_residues MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVRVRPTAASLPGVEMVTATVAH IDIAAQVVHTDNSVIGYDALVIALGAALNTDAVPGLSDALDADVAGQFYTLDGAAELRAKVEALEHGRIAVAIAGVPFKC PAAPFEAAFLIAAQLGDRYATGTVQIDTFTPDPLPMPVAGPEVGEALVSMLKDHGVGFHPRKALARVDEAARTMHFGDGT SEPFDLLAVVPPHVPSAAARSAGLSESGWIPVDPRTLSTSADNVWAIGDATVLTLPNGKPLPKAAVFAEAQAAVVAHGVA RHLGYDVAERHFTGTGACYVETGDHQAAKGDGDFFAPSAPSVTLYPPSREFHEEKVAQELAWLTRWKT >Mature_387_residues SKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVRVRPTAASLPGVEMVTATVAHI DIAAQVVHTDNSVIGYDALVIALGAALNTDAVPGLSDALDADVAGQFYTLDGAAELRAKVEALEHGRIAVAIAGVPFKCP AAPFEAAFLIAAQLGDRYATGTVQIDTFTPDPLPMPVAGPEVGEALVSMLKDHGVGFHPRKALARVDEAARTMHFGDGTS EPFDLLAVVPPHVPSAAARSAGLSESGWIPVDPRTLSTSADNVWAIGDATVLTLPNGKPLPKAAVFAEAQAAVVAHGVAR HLGYDVAERHFTGTGACYVETGDHQAAKGDGDFFAPSAPSVTLYPPSREFHEEKVAQELAWLTRWKT
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10864011, Length=305, Percent_Identity=23.2786885245902, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24657386, Length=305, Percent_Identity=24.5901639344262, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24657391, Length=305, Percent_Identity=24.5901639344262, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40789; Mature: 40657
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVR CCCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCE VRPTAASLPGVEMVTATVAHIDIAAQVVHTDNSVIGYDALVIALGAALNTDAVPGLSDAL EEECCCCCCCHHHHHHHHHHHEEEEEEEECCCCEEHHHHHHHHHHHHCCCCCCCCCHHHH DADVAGQFYTLDGAAELRAKVEALEHGRIAVAIAGVPFKCPAAPFEAAFLIAAQLGDRYA CCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEE TGTVQIDTFTPDPLPMPVAGPEVGEALVSMLKDHGVGFHPRKALARVDEAARTMHFGDGT CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCC SEPFDLLAVVPPHVPSAAARSAGLSESGWIPVDPRTLSTSADNVWAIGDATVLTLPNGKP CCCEEEEEECCCCCCCHHHHHCCCCCCCEECCCCCEECCCCCCEEEECCEEEEECCCCCC LPKAAVFAEAQAAVVAHGVARHLGYDVAERHFTGTGACYVETGDHQAAKGDGDFFAPSAP CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECCCCC SVTLYPPSREFHEEKVAQELAWLTRWKT EEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVR CCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCE VRPTAASLPGVEMVTATVAHIDIAAQVVHTDNSVIGYDALVIALGAALNTDAVPGLSDAL EEECCCCCCCHHHHHHHHHHHEEEEEEEECCCCEEHHHHHHHHHHHHCCCCCCCCCHHHH DADVAGQFYTLDGAAELRAKVEALEHGRIAVAIAGVPFKCPAAPFEAAFLIAAQLGDRYA CCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEE TGTVQIDTFTPDPLPMPVAGPEVGEALVSMLKDHGVGFHPRKALARVDEAARTMHFGDGT CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCC SEPFDLLAVVPPHVPSAAARSAGLSESGWIPVDPRTLSTSADNVWAIGDATVLTLPNGKP CCCEEEEEECCCCCCCHHHHHCCCCCCCEECCCCCEECCCCCCEEEECCEEEEECCCCCC LPKAAVFAEAQAAVVAHGVARHLGYDVAERHFTGTGACYVETGDHQAAKGDGDFFAPSAP CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECCCCC SVTLYPPSREFHEEKVAQELAWLTRWKT EEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA