| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is uidR [C]
Identifier: 148660003
GI number: 148660003
Start: 289790
End: 290404
Strand: Direct
Name: uidR [C]
Synonym: MRA_0247
Alternate gene names: 148660003
Gene position: 289790-290404 (Clockwise)
Preceding gene: 148660002
Following gene: 148660004
Centisome position: 6.56
GC content: 63.74
Gene sequence:
>615_bases ATGGCAGGTGGTACCAAGCGACTACCGCGTGCTGTCCGAGAGCAGCAGATGCTCGATGCCGCCGTGCAGATGTTCTCGGT TAACGGCTACCACGAGACCTCGATGGACGCGATCGCTGCCGAGGCGCAGATCTCCAAGCCGATGCTGTACCTGTACTACG GCTCCAAGGAAGACCTGTTCGGCGCCTGCCTGAACCGTGAGATGAGCCGGTTCATCGACGCGTTGCGTTCCAGCATCAAC TTCGACCAGAGCCCGAAAGACTTGCTGCGCAACACCATCGTGTCGTTCCTACGCTATATCGATGCCAACCGGGCGTCGTG GATCGTGATGTACACCCAGGCCACCAGCTCCCAAGCGTTCGCGCACACGGTGCGTGAGGGGCGCGAACAGATCGTCCAAC TGGTGGCCGAGTTGGTGCGGGCCGGCACCCGCGGCCCGCTTACGGACGCCGAAATCGAGATGATGGCCGTCGCGCTGGTG GGCGCCGGCGAGGCAGTGGCCACCCGGCTCGGTATCGGTGACACCGACGTTGACGAGGCGGCCGAGATGATGATCAACCT GTTCTGGCTCGGCCTCAAGGGCGCGCCGGTGGATCGGCTCGAGACCGGGCACTGA
Upstream 100 bases:
>100_bases GCCCAACCCGGGGTGTGGCCGTTAGCGATGTGCGGCTGGCGCCCCACTGCTTACCGTAGGGTTAGATAGACGGGCTACAG GGGCCCAAAAGGGGCTGGCG
Downstream 100 bases:
>100_bases CCTGCGCGGTATCGGCCACTGAGATGTGGGTGTATTTTAGATGCAGATGTAAATTCGATGTATGATTCGAACGCAAGTCC AGCTCCCAGATGAGCTTTAC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; TetR-Family Protein Regulatory Protein; LOW QUALITY PROTEIN TetR-Family Regulatory Protein; Regulatory Protein; Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MAGGTKRLPRAVREQQMLDAAVQMFSVNGYHETSMDAIAAEAQISKPMLYLYYGSKEDLFGACLNREMSRFIDALRSSIN FDQSPKDLLRNTIVSFLRYIDANRASWIVMYTQATSSQAFAHTVREGREQIVQLVAELVRAGTRGPLTDAEIEMMAVALV GAGEAVATRLGIGDTDVDEAAEMMINLFWLGLKGAPVDRLETGH
Sequences:
>Translated_204_residues MAGGTKRLPRAVREQQMLDAAVQMFSVNGYHETSMDAIAAEAQISKPMLYLYYGSKEDLFGACLNREMSRFIDALRSSIN FDQSPKDLLRNTIVSFLRYIDANRASWIVMYTQATSSQAFAHTVREGREQIVQLVAELVRAGTRGPLTDAEIEMMAVALV GAGEAVATRLGIGDTDVDEAAEMMINLFWLGLKGAPVDRLETGH >Mature_203_residues AGGTKRLPRAVREQQMLDAAVQMFSVNGYHETSMDAIAAEAQISKPMLYLYYGSKEDLFGACLNREMSRFIDALRSSINF DQSPKDLLRNTIVSFLRYIDANRASWIVMYTQATSSQAFAHTVREGREQIVQLVAELVRAGTRGPLTDAEIEMMAVALVG AGEAVATRLGIGDTDVDEAAEMMINLFWLGLKGAPVDRLETGH
Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22497; Mature: 22366
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGTKRLPRAVREQQMLDAAVQMFSVNGYHETSMDAIAAEAQISKPMLYLYYGSKEDLF CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHH GACLNREMSRFIDALRSSINFDQSPKDLLRNTIVSFLRYIDANRASWIVMYTQATSSQAF HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHH AHTVREGREQIVQLVAELVRAGTRGPLTDAEIEMMAVALVGAGEAVATRLGIGDTDVDEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHH AEMMINLFWLGLKGAPVDRLETGH HHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AGGTKRLPRAVREQQMLDAAVQMFSVNGYHETSMDAIAAEAQISKPMLYLYYGSKEDLF CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHH GACLNREMSRFIDALRSSINFDQSPKDLLRNTIVSFLRYIDANRASWIVMYTQATSSQAF HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHH AHTVREGREQIVQLVAELVRAGTRGPLTDAEIEMMAVALVGAGEAVATRLGIGDTDVDEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHH AEMMINLFWLGLKGAPVDRLETGH HHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA