Definition Roseiflexus sp. RS-1 chromosome, complete genome.
Accession NC_009523
Length 5,801,598

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 148656382

GI number:

Start: 2780213

End: 2782906

Strand: Direct

Name: Not Available

Synonym: RoseRS_2258

Alternate gene names: NA

Gene position: NA

Preceding gene: 148656381

Following gene: 148656384

Centisome position: NA

GC content: NA

Gene sequence:

>2694_bases
ATGAAGATGAATATTATCGCTATACGCTGTCGCAGGCATAATCGGGGAGAAAATCCCAAGTCATTCCGCTTATTGCAAAT
CGCGCTTGACCAGGGACAAAAAAGAGCGATGCGCTATTTAACGGAAAAGGATGGTAATATTGTTAAAGGAGCTTGGTCAT
ATACCTCTCGTCCGTTCGCCCCTGGTTTATACTGCTTCCATTGTCTTAATGAAGGCATCCGCGAAATGATACCTGTTGAT
CTTGAAGACCTTCGTGATCTGGGTCTTTCAGATCTGCCACTTGTGTTTCAGTCAGCGGAGTCCTTTCAGGCGGTAACGCT
TGTTAACTCCATGATTAACAGGTATCAGGACGCGATTCGTAATATTCAGGAATTTCCTGCACGTTCAGCCTCTTTTGATG
ATAATAGAATAATTAATGGTCTGAATCCAGAACTTCAGCACGTTTTGCAGAAGAAGGTGTTGCCCAAAGGTGGAAAACTT
TATTCGTTTCAGGCTAAGGCTATTGAGGTGGCGCTTAATGGTCACGATATCATCATTACAACCCCTACCGCAAGTGGTAA
ATCATTAGCGTATATACTACCGGTGTTAGAGGCTACATTATGCTCTTCTGATGCTACCGCGCTCTATATTTCGCCATTAG
TGGCTCTGACTGAAGATCAGTTTGAAGCGCTTACGATTTTTGATGAGAGCGGTACAGATTGGATCAGGAAGGGTGAACGT
TTTTCTATTCATCGTGTATGCCGGACGCTTGTGATAGGCTCTCGAAGAGTCACTATCGCACGTTATGACGGTTCTGTGCT
GCCTGGTGATCGGGAGGAAATACGTCGGCGCCGTCCGCAGTATGTTCTGACAACCCCTGATATGCTCCATATGGCTATGC
TCAGAGGTGCGTTTGATGATCGACATTGGCGTTATCTTCTGGCAGGGTTGCGCTACATCGTAATCGACGAAATGCACATC
TATCGGGGTATTCTTGGTGCCTCCTTCGCCAACCTGATACGGCGGCTTCAACGTTTGTGTCGGTTGCATGGGACCAATCC
GCAATTCTTATGCGCGTCTGCGACCATGGTTGATCCGATTGGAACCGTAGAGCGTTTCATTGGTCGGCGTCCAGTCGGAG
TTGATGGATCTGAGGATGGCGTTCCCCAACATAAGCGTATGGTGGTGATCTGGAGCAGCAGTGTCGATGATGGTCAGGTG
TATGCAACATCGACTCATGCTAAAAATGTGCTACTGCACCTTATAAGCGAACGTGTCCGCCATATCGCATTCGCGCGATC
AATTGGAGAAATTAACGATATTTATCGCTTTACTTCTGCTGAGTTACGCGAACAAGGCATTGACACGCCGCTTATCAAGC
CATTTATGCGTGAACTGCGGCCAGACGAGAAACGCGCCATCATTCGAGATCTTAAGGATGGCCGCCTTCATAGTGTTATC
TCAACAACCGCTCTCTCGATGGGTATTGATATCGGTAGTCTTTCGGCAGCCGTCATTATCGGTTTTCCGGGATCGATCGC
ACAATTCTGGCAGCAGGCTGGTCGTGCTGGACGTGCTGGCGAAGGTGTGATCATCTTGATTGCTGATCGAAATCCACTGG
ACCAATTTTTTGTCCAGCACCCAGAGGTCTTATTCGATCTGAATGCAGAGCCAGTCTATTGCAATCCTGACAATCCATAT
ATCGTGCGGAGCCATTTGTTGACAGCAGCGCGCGAATTTCCACTGAGTGACGAAGATTTCCATTTGTTCGGAAAAGCTGC
ACTGGATCAAATACAGACGTTGACCGCCGAGGGATTGATGACTTCTGATGGCATGGGTCGATATGAATTGACGGAATCTG
CTAAAAATTTGGCTGATACGCCTTTTCGCAGTCTCACGTTCGCTGTTCCGGTGAAGGATCAGGAAAAGCGTCTGATTGTC
GAAGTTGATGCAGCAAGAGCGCAGCGGGCTTTGCATCGCCATGCACATTATCAGCATATTGATCGCTATTATCGTGTTAT
TTCCTGTGATCTGGATTGGAGTCGAGGGCGTGGCGAAGTTGTCGTTCAGGAGTTAGAACATCCCGAATATACGACAGCTG
CGCATGTTGAGATAGATATCTCGATCATTGACTGTCAGATCCAGCGTGATGATGAACATTACGTCGTAGGGTACGGCATT
GTCAAGTGTCATACCCGGGTTGATGGATACTACGAAGTTCCGCTGTTTTCTCGTAATGAGCCCTTCAAGTATCGACCGCT
CGGTCGCGCAGCACCTCCACCGCTCGAATATCAGACGCAGGCATTCTGGCTGTTGCTTTCTCCGAAAGTATTGGATGCAA
TCTCGCCTGATGAACGAGAAGCCGCGATGTACTCACTGGCAGGCGCGTTACGGTTAGCGACGTCTATAGAAGAATTGTGC
GACCTTTCAGACGTCGAAGGCGTCGGAATGCTACACTTTCAGGATGTCCTTCGCCCCATGGTGATGGTGTATGACACGGT
TCCTGGAGGTGTTGGCATTACAGAGGCAGCGTTCAGACGTCTTGACCGAATATTGCTTCGAGCAGTGCAGATCCTCGAGG
AGTGTCCATATTGCTCGAAACATCCAGAGAGTCGTGGTTGCCCTTATTGCGTTACCGCAAGGTATGGCGATGAAAAAACG
ATCAACCGTTTGGCTGCGCTGGAAATCATTCGTAACTTTCAGTCTTCAAGTTGA

Upstream 100 bases:

>100_bases
CACGGGAGAGAATTCGTCAAATCGAGCGAAAAGCGCTCAAACGTCTTAATAGAGGTGAATATCGACGAATATTACAACCT
TTTCTTTACCAATGAGGAGG

Downstream 100 bases:

>100_bases
CAATATATCTTGTTCGTATTCTTGAATTTTTCTTCCCGTCGACGGCGAGTGAAGAGCGCATGTCTGGAGCCGATACCTTT
CAAGTAAGGAAGCACAAGCC

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>897_residues
MKMNIIAIRCRRHNRGENPKSFRLLQIALDQGQKRAMRYLTEKDGNIVKGAWSYTSRPFAPGLYCFHCLNEGIREMIPVD
LEDLRDLGLSDLPLVFQSAESFQAVTLVNSMINRYQDAIRNIQEFPARSASFDDNRIINGLNPELQHVLQKKVLPKGGKL
YSFQAKAIEVALNGHDIIITTPTASGKSLAYILPVLEATLCSSDATALYISPLVALTEDQFEALTIFDESGTDWIRKGER
FSIHRVCRTLVIGSRRVTIARYDGSVLPGDREEIRRRRPQYVLTTPDMLHMAMLRGAFDDRHWRYLLAGLRYIVIDEMHI
YRGILGASFANLIRRLQRLCRLHGTNPQFLCASATMVDPIGTVERFIGRRPVGVDGSEDGVPQHKRMVVIWSSSVDDGQV
YATSTHAKNVLLHLISERVRHIAFARSIGEINDIYRFTSAELREQGIDTPLIKPFMRELRPDEKRAIIRDLKDGRLHSVI
STTALSMGIDIGSLSAAVIIGFPGSIAQFWQQAGRAGRAGEGVIILIADRNPLDQFFVQHPEVLFDLNAEPVYCNPDNPY
IVRSHLLTAAREFPLSDEDFHLFGKAALDQIQTLTAEGLMTSDGMGRYELTESAKNLADTPFRSLTFAVPVKDQEKRLIV
EVDAARAQRALHRHAHYQHIDRYYRVISCDLDWSRGRGEVVVQELEHPEYTTAAHVEIDISIIDCQIQRDDEHYVVGYGI
VKCHTRVDGYYEVPLFSRNEPFKYRPLGRAAPPPLEYQTQAFWLLLSPKVLDAISPDEREAAMYSLAGALRLATSIEELC
DLSDVEGVGMLHFQDVLRPMVMVYDTVPGGVGITEAAFRRLDRILLRAVQILEECPYCSKHPESRGCPYCVTARYGDEKT
INRLAALEIIRNFQSSS

Sequences:
NA

Specific function: NA

COG id: COG1205

COG function: function code R; Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA