| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is fhs
Identifier: 148654152
GI number: 148654152
Start: 2933549
End: 2935258
Strand: Direct
Name: fhs
Synonym: PsycPRwf_2355
Alternate gene names: 148654152
Gene position: 2933549-2935258 (Clockwise)
Preceding gene: 148654151
Following gene: 148654153
Centisome position: 98.48
GC content: 49.53
Gene sequence:
>1710_bases ATGACCGTCCCTAGTGATATTACTATTGCCCAAAATGCCACATTAAGACCTATTGTTGATATTGCTAAAAAAATAGGGCT TTCAGCAGATAAGATTGAACCTTATGGCTATTACAAAGCCAAGATTAACCCAAATGATGTGTTTGATATGCCCGCTAAGT CGAGCAATAGCAAACTGGTATTGGTCACCGCCATTAATCCCACCCCAGCCGGTGAAGGTAAGACCACCGTCACCATTGGG CTGGCCGATGCGCTAAACCGTGTACATCATCAAGACCAAAACGGCAAACGTACTGTTGTGGCGCTACGTGAGCCGTCTGT GGGTCCTGTGTTCGGCATTAAAGGCGGCGCAGCAGGGGGCGGCTATGCTCAAGTGTTGCCGATGGAGGATATCAATCTAC ATTTCACTGGCGACTTGCATGCCATTGGTGCGGCCAACAACTTACTTGCCGCCCTAATCGATAACCATATTTATCAAGGC AACGCGCTCAATATTGACCCAAAGCAAGTGGTGTGGCGCCGAGCGGTGGATATGAATGACCGTCAGCTGCGCAATACGGT CACTGGTCTGGGCAAGCCTGCCGATGGGGTAATGCGCGAAGATGGCTTCGATATCACTGTGGCCTCAGAGGTCATGGCGA TTTTTTGTTTGGCCACTGATTTGGCAGATTTAAAGCAGCGCTTGGGCAATATCTTAGTCGCTTATAACCAAGACAAGCAG CCCATTTATGCTAAGGACCTCAAGGCTCATGGTGCCATGGCCGCCTTGTTAAAAGATGCCATTAAGCCAAACTTGGTACA GACCATTGAGGGCACGCCAGCCATCTTACACGGTGGCCCTTTTGCCAATATCGCTCATGGCTGTAACTCGGTCATTGCCA CCCGTACTGCCATGCATTTGGCCGATTACACACTCACAGAAGCAGGCTTCGGTGCTGACTTGGGTGCAGAGAAATTTTGT GATATTAAATGCCGACTGGCCGGTCTTACCCCCGATGCAGCCGTGGTGGTCGCGACCATTCGTGCCCTTAAATATAATGG TGGCGCGGCCAAAGATGCACTAAAAAATGAGGATCTAACTGCGCTTGAGCAAGGACTGCCCAATCTAACTAAACACATTG AGAACCTACAAGAAGTATTCGGTCTGCCTGTGGTGGTCGCGATCAACCAATTTGAAAGCGACACGGCTGCTGAAATCGAG ATGGTACGCAAAGCCTGTAAACGTCTAAAAGTAGAGGTGGCGTTAACTCAGGTGTGGGAAAAAGGCGGCGCCGGTGGCGA GGATTTGGCCCGCACCTTGTTAGCGCTGTTAGAGACACATAACGATCAGCCGCAAACCTTTGGGTTTGCGTATGACAGTA ACAAGCCTATTGTCAATAAAATACGCACTGTCGCCCAGCGCATTTATGGTGCCAATGATGTGGATATCAGTGTGACAGCG GCAGCGAAGATTAAGCGATTAGAAGCGTTGGGGCTTGATAAAATGCCTATTTGTATCGCCAAGACTCAATACTCGCTCAG CGATGACGCCAAGCTATTAGGGCGACCCACCGGCTTTAACATTCATGTGCGTGATATCAGTGTGTCTAACGGCGCCGGCT TTATTGTGGTCATCTGTGGCCCTATCATGAAGATGCCCGGCCTACCAAAATACCCTTCTGCCGAAAACATTGATGTCGAT GAGAAGGGGAACATTACCGGACTGTTTTAA
Upstream 100 bases:
>100_bases AAATTAGCGGCTTTTATCACATATAAATAGCGCCTAATTATAAATAACTCCCAATATTTTTTGCTATCTTTAGATGACCC TTTTTATTTGAGGCCTGATT
Downstream 100 bases:
>100_bases CCATAACGGCTCCTGTTTATGCCTCCTCTTTGTGAAACCTATGAGCAGCACTTTGGTCTTTACCAATGTGCTGCTTTTTA GTGATACAACCTAGTTTGCC
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MTVPSDITIAQNATLRPIVDIAKKIGLSADKIEPYGYYKAKINPNDVFDMPAKSSNSKLVLVTAINPTPAGEGKTTVTIG LADALNRVHHQDQNGKRTVVALREPSVGPVFGIKGGAAGGGYAQVLPMEDINLHFTGDLHAIGAANNLLAALIDNHIYQG NALNIDPKQVVWRRAVDMNDRQLRNTVTGLGKPADGVMREDGFDITVASEVMAIFCLATDLADLKQRLGNILVAYNQDKQ PIYAKDLKAHGAMAALLKDAIKPNLVQTIEGTPAILHGGPFANIAHGCNSVIATRTAMHLADYTLTEAGFGADLGAEKFC DIKCRLAGLTPDAAVVVATIRALKYNGGAAKDALKNEDLTALEQGLPNLTKHIENLQEVFGLPVVVAINQFESDTAAEIE MVRKACKRLKVEVALTQVWEKGGAGGEDLARTLLALLETHNDQPQTFGFAYDSNKPIVNKIRTVAQRIYGANDVDISVTA AAKIKRLEALGLDKMPICIAKTQYSLSDDAKLLGRPTGFNIHVRDISVSNGAGFIVVICGPIMKMPGLPKYPSAENIDVD EKGNITGLF
Sequences:
>Translated_569_residues MTVPSDITIAQNATLRPIVDIAKKIGLSADKIEPYGYYKAKINPNDVFDMPAKSSNSKLVLVTAINPTPAGEGKTTVTIG LADALNRVHHQDQNGKRTVVALREPSVGPVFGIKGGAAGGGYAQVLPMEDINLHFTGDLHAIGAANNLLAALIDNHIYQG NALNIDPKQVVWRRAVDMNDRQLRNTVTGLGKPADGVMREDGFDITVASEVMAIFCLATDLADLKQRLGNILVAYNQDKQ PIYAKDLKAHGAMAALLKDAIKPNLVQTIEGTPAILHGGPFANIAHGCNSVIATRTAMHLADYTLTEAGFGADLGAEKFC DIKCRLAGLTPDAAVVVATIRALKYNGGAAKDALKNEDLTALEQGLPNLTKHIENLQEVFGLPVVVAINQFESDTAAEIE MVRKACKRLKVEVALTQVWEKGGAGGEDLARTLLALLETHNDQPQTFGFAYDSNKPIVNKIRTVAQRIYGANDVDISVTA AAKIKRLEALGLDKMPICIAKTQYSLSDDAKLLGRPTGFNIHVRDISVSNGAGFIVVICGPIMKMPGLPKYPSAENIDVD EKGNITGLF >Mature_568_residues TVPSDITIAQNATLRPIVDIAKKIGLSADKIEPYGYYKAKINPNDVFDMPAKSSNSKLVLVTAINPTPAGEGKTTVTIGL ADALNRVHHQDQNGKRTVVALREPSVGPVFGIKGGAAGGGYAQVLPMEDINLHFTGDLHAIGAANNLLAALIDNHIYQGN ALNIDPKQVVWRRAVDMNDRQLRNTVTGLGKPADGVMREDGFDITVASEVMAIFCLATDLADLKQRLGNILVAYNQDKQP IYAKDLKAHGAMAALLKDAIKPNLVQTIEGTPAILHGGPFANIAHGCNSVIATRTAMHLADYTLTEAGFGADLGAEKFCD IKCRLAGLTPDAAVVVATIRALKYNGGAAKDALKNEDLTALEQGLPNLTKHIENLQEVFGLPVVVAINQFESDTAAEIEM VRKACKRLKVEVALTQVWEKGGAGGEDLARTLLALLETHNDQPQTFGFAYDSNKPIVNKIRTVAQRIYGANDVDISVTAA AKIKRLEALGLDKMPICIAKTQYSLSDDAKLLGRPTGFNIHVRDISVSNGAGFIVVICGPIMKMPGLPKYPSAENIDVDE KGNITGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI36796743, Length=631, Percent_Identity=44.3740095087163, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI222136639, Length=631, Percent_Identity=41.838351822504, Blast_Score=445, Evalue=1e-125, Organism=Homo sapiens, GI310124614, Length=85, Percent_Identity=44.7058823529412, Blast_Score=77, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17568737, Length=634, Percent_Identity=40.8517350157729, Blast_Score=421, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17568739, Length=634, Percent_Identity=40.8517350157729, Blast_Score=421, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6321643, Length=636, Percent_Identity=42.6100628930818, Blast_Score=449, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6319558, Length=643, Percent_Identity=41.3685847589425, Blast_Score=447, Evalue=1e-126, Organism=Drosophila melanogaster, GI62472483, Length=631, Percent_Identity=43.4231378763867, Blast_Score=476, Evalue=1e-134, Organism=Drosophila melanogaster, GI45551871, Length=631, Percent_Identity=43.4231378763867, Blast_Score=476, Evalue=1e-134, Organism=Drosophila melanogaster, GI24645718, Length=631, Percent_Identity=43.4231378763867, Blast_Score=476, Evalue=1e-134, Organism=Drosophila melanogaster, GI17137370, Length=631, Percent_Identity=43.4231378763867, Blast_Score=476, Evalue=1e-134,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_PSYWF (A5WI04)
Other databases:
- EMBL: CP000713 - RefSeq: YP_001281245.1 - ProteinModelPortal: A5WI04 - SMR: A5WI04 - STRING: A5WI04 - GeneID: 5205124 - GenomeReviews: CP000713_GR - KEGG: prw:PsycPRwf_2355 - eggNOG: COG2759 - HOGENOM: HBG677721 - OMA: KMPGLPK - ProtClustDB: PRK13505 - BioCyc: PSP56811:PSYCPRWF_2355-MONOMER - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 60835; Mature: 60703
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPSDITIAQNATLRPIVDIAKKIGLSADKIEPYGYYKAKINPNDVFDMPAKSSNSKLV CCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEE LVTAINPTPAGEGKTTVTIGLADALNRVHHQDQNGKRTVVALREPSVGPVFGIKGGAAGG EEEEECCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCCCC GYAQVLPMEDINLHFTGDLHAIGAANNLLAALIDNHIYQGNALNIDPKQVVWRRAVDMND CCEEEEEECCCEEEEECCEEEECCHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHCCCCH RQLRNTVTGLGKPADGVMREDGFDITVASEVMAIFCLATDLADLKQRLGNILVAYNQDKQ HHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC PIYAKDLKAHGAMAALLKDAIKPNLVQTIEGTPAILHGGPFANIAHGCNSVIATRTAMHL CCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH ADYTLTEAGFGADLGAEKFCDIKCRLAGLTPDAAVVVATIRALKYNGGAAKDALKNEDLT HHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCHH ALEQGLPNLTKHIENLQEVFGLPVVVAINQFESDTAAEIEMVRKACKRLKVEVALTQVWE HHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KGGAGGEDLARTLLALLETHNDQPQTFGFAYDSNKPIVNKIRTVAQRIYGANDVDISVTA HCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEH AAKIKRLEALGLDKMPICIAKTQYSLSDDAKLLGRPTGFNIHVRDISVSNGAGFIVVICG HHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCCEEEEEEEEECCCCCEEEEEEC PIMKMPGLPKYPSAENIDVDEKGNITGLF HHHHCCCCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure TVPSDITIAQNATLRPIVDIAKKIGLSADKIEPYGYYKAKINPNDVFDMPAKSSNSKLV CCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEE LVTAINPTPAGEGKTTVTIGLADALNRVHHQDQNGKRTVVALREPSVGPVFGIKGGAAGG EEEEECCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCCCC GYAQVLPMEDINLHFTGDLHAIGAANNLLAALIDNHIYQGNALNIDPKQVVWRRAVDMND CCEEEEEECCCEEEEECCEEEECCHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHCCCCH RQLRNTVTGLGKPADGVMREDGFDITVASEVMAIFCLATDLADLKQRLGNILVAYNQDKQ HHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC PIYAKDLKAHGAMAALLKDAIKPNLVQTIEGTPAILHGGPFANIAHGCNSVIATRTAMHL CCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH ADYTLTEAGFGADLGAEKFCDIKCRLAGLTPDAAVVVATIRALKYNGGAAKDALKNEDLT HHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCHH ALEQGLPNLTKHIENLQEVFGLPVVVAINQFESDTAAEIEMVRKACKRLKVEVALTQVWE HHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KGGAGGEDLARTLLALLETHNDQPQTFGFAYDSNKPIVNKIRTVAQRIYGANDVDISVTA HCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEH AAKIKRLEALGLDKMPICIAKTQYSLSDDAKLLGRPTGFNIHVRDISVSNGAGFIVVICG HHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCCEEEEEEEEECCCCCEEEEEEC PIMKMPGLPKYPSAENIDVDEKGNITGLF HHHHCCCCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA