| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is tatB [H]
Identifier: 148654118
GI number: 148654118
Start: 2888170
End: 2888934
Strand: Direct
Name: tatB [H]
Synonym: PsycPRwf_2321
Alternate gene names: 148654118
Gene position: 2888170-2888934 (Clockwise)
Preceding gene: 148654117
Following gene: 148654119
Centisome position: 96.95
GC content: 48.37
Gene sequence:
>765_bases ATGTTTGACTTTAGTTTTTATGAAATGTTGGTGTTCGGCATCATCGCACTCATTGTCTTGGGGCCAGAAAAATTGCCCCA AGCAGTACGTACGGTCGGCACTTACTACTCTAAGTTTCGCCGCACTGTAGGCACCTTGAAAGCTGAGATGGAGGCAGAAC TTGATTTGGCCGAAACCCGTCAGCTGATGCAAAAGGAGCTGGAAAAAATTCGTCTTGCCGAGGCTGAGATGCAAAAGGAG ATGGACGAGCTGCGCGGTAGTATGAAAGAGTTTGAGCAACAAAAATCGCAGCTACAGCAAACCTTAAACAGCGCAAGCTT TGCCTCCTCTACAGATACCTCTGTTGAAGTAGAGGCATCAAGTACGTTGAGCGATTCTAATCAGAACATCGCTGAAAAGG CTGCCAGCAAACAAAAGGCATCAGAGCGCTTAGAAAAACCATGGGTGCATCCGGTAACCAATGCCACTACGATGGGCCAA TCTCATTCAGATTATGCTTATGCACCCTCAGCTGCTACTGCTTATATAGACCCACAAGACCTAGATAGCAGCCAAGCCAA CATCTCTGATACTGATACTGATACTGATACTGCAGCTCAGCAAAATCAGCTGCCGCTTACCAGACCTTGGGAGAACATGT GGTTTTTGTTGGGAGATTATGACCGAGCCCGGCGGCTACCGCCAGCACCCTTTGTTCCTGACTATAAGGCCATTCCCCTG CTGTATGATACAGCAGCTGGGCACAGCACTAAGGTGGGACCATGA
Upstream 100 bases:
>100_bases TACGCACCCTGAGGTGAAAGTGGACGAGGTAAAAATCAAAGCTGAAGACACGCATCAATCCTAATCCTTATTTAATACCG TAATAGGATAATAAGCGGCT
Downstream 100 bases:
>100_bases GCTTATTTAAAAACAAAAAAAGCCGCTTTGACACCCCAGCTTCGCTGCTAGACGGTGAAAAAGTGAGCGATAGCATAGAA GACAGTAACAGCTTGGCTGA
Product: twin-arginine translocation protein subunit TatB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MFDFSFYEMLVFGIIALIVLGPEKLPQAVRTVGTYYSKFRRTVGTLKAEMEAELDLAETRQLMQKELEKIRLAEAEMQKE MDELRGSMKEFEQQKSQLQQTLNSASFASSTDTSVEVEASSTLSDSNQNIAEKAASKQKASERLEKPWVHPVTNATTMGQ SHSDYAYAPSAATAYIDPQDLDSSQANISDTDTDTDTAAQQNQLPLTRPWENMWFLLGDYDRARRLPPAPFVPDYKAIPL LYDTAAGHSTKVGP
Sequences:
>Translated_254_residues MFDFSFYEMLVFGIIALIVLGPEKLPQAVRTVGTYYSKFRRTVGTLKAEMEAELDLAETRQLMQKELEKIRLAEAEMQKE MDELRGSMKEFEQQKSQLQQTLNSASFASSTDTSVEVEASSTLSDSNQNIAEKAASKQKASERLEKPWVHPVTNATTMGQ SHSDYAYAPSAATAYIDPQDLDSSQANISDTDTDTDTAAQQNQLPLTRPWENMWFLLGDYDRARRLPPAPFVPDYKAIPL LYDTAAGHSTKVGP >Mature_254_residues MFDFSFYEMLVFGIIALIVLGPEKLPQAVRTVGTYYSKFRRTVGTLKAEMEAELDLAETRQLMQKELEKIRLAEAEMQKE MDELRGSMKEFEQQKSQLQQTLNSASFASSTDTSVEVEASSTLSDSNQNIAEKAASKQKASERLEKPWVHPVTNATTMGQ SHSDYAYAPSAATAYIDPQDLDSSQANISDTDTDTDTAAQQNQLPLTRPWENMWFLLGDYDRARRLPPAPFVPDYKAIPL LYDTAAGHSTKVGP
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family [H]
Homologues:
Organism=Escherichia coli, GI48994984, Length=87, Percent_Identity=41.3793103448276, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 28390; Mature: 28390
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDFSFYEMLVFGIIALIVLGPEKLPQAVRTVGTYYSKFRRTVGTLKAEMEAELDLAETR CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QLMQKELEKIRLAEAEMQKEMDELRGSMKEFEQQKSQLQQTLNSASFASSTDTSVEVEAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC STLSDSNQNIAEKAASKQKASERLEKPWVHPVTNATTMGQSHSDYAYAPSAATAYIDPQD CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCEECCCCCEEEECHHH LDSSQANISDTDTDTDTAAQQNQLPLTRPWENMWFLLGDYDRARRLPPAPFVPDYKAIPL CCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHEEEECCHHHHCCCCCCCCCCCCCCCCE LYDTAAGHSTKVGP EEECCCCCCCCCCC >Mature Secondary Structure MFDFSFYEMLVFGIIALIVLGPEKLPQAVRTVGTYYSKFRRTVGTLKAEMEAELDLAETR CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QLMQKELEKIRLAEAEMQKEMDELRGSMKEFEQQKSQLQQTLNSASFASSTDTSVEVEAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC STLSDSNQNIAEKAASKQKASERLEKPWVHPVTNATTMGQSHSDYAYAPSAATAYIDPQD CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCEECCCCCEEEECHHH LDSSQANISDTDTDTDTAAQQNQLPLTRPWENMWFLLGDYDRARRLPPAPFVPDYKAIPL CCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHEEEECCHHHHCCCCCCCCCCCCCCCCE LYDTAAGHSTKVGP EEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA