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The map label for this gene is ycaC [H]

Identifier: 148654098

GI number: 148654098

Start: 2868524

End: 2869198

Strand: Direct

Name: ycaC [H]

Synonym: PsycPRwf_2301

Alternate gene names: 148654098

Gene position: 2868524-2869198 (Clockwise)

Preceding gene: 148654097

Following gene: 148654100

Centisome position: 96.29

GC content: 41.33

Gene sequence:

>675_bases
ATGTTTAAGCCAAAAAAACCAAAACTTAAAACTGATGACAATCTTTATAAACGTCTTTCTGTAGATGACGCTGTGGTCTT
ATTTGTAGACCATCAGACTGGCCTTCAGACCCTATGCCGAGACATGCCAGCTGATGAATTCAAAAAAAACGTGTTGGCTA
TGGGCAAAATTGCTAAATACTTTGATTTACCAGTGGTAATGACTACCAGCTTTGAGCAAGGTCCTAATGGTCCAATGATG
CCAGAGTTAAAAGAGATGTTTAAAGATGCAGCTTACATTGCTCGTCCTGGTGAAATTAACGCTTGGGATAATGCAGACTT
TGTTAAAGCAGTTAAGAAAACTGGCCGTAAACAAATCATTATTGCCGGTATCGTAACGGAAGTTTGTGTGGCATTCCCAG
TATTATCTGCTCTGGCTGAAGGCTATGAGGTATTCGTAGTTACAGATGCTTCAGGCACCTTTAATGATATGAGCCGTAAC
GCCGCTTGGTTACGTATGCAGCAAGAAGGCGCTCAGTTATTGACTTGGTTTGCTATGTCGAACGAATTACGTCGTGACTG
GCGTGAAGATATGGAAGGCTATCTAAATCTGTTCTATGAGATCAGTACAGAGTATGCCCCCTTGGTAGACAGCTACAATG
CGGTTAAAAATGCCAATCCAAAAGATCTACTGTAA

Upstream 100 bases:

>100_bases
TATTATTAATGTGCTGAGGGATAAGAACAAGGCATTAATAATACAACTTAATTTAGACTCACTTTTACGACTATAAACCG
ACTAAAAAAAGGATCAAAGT

Downstream 100 bases:

>100_bases
TAATTGATCACCTAAGATCGCAGCAGTTTTCTAAGATAAGGTCGGCTTTGTTATATTTGTTTATGCTAACTAGGTCATCA
TTTATTTGCTAAACCGCTGG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MFKPKKPKLKTDDNLYKRLSVDDAVVLFVDHQTGLQTLCRDMPADEFKKNVLAMGKIAKYFDLPVVMTTSFEQGPNGPMM
PELKEMFKDAAYIARPGEINAWDNADFVKAVKKTGRKQIIIAGIVTEVCVAFPVLSALAEGYEVFVVTDASGTFNDMSRN
AAWLRMQQEGAQLLTWFAMSNELRRDWREDMEGYLNLFYEISTEYAPLVDSYNAVKNANPKDLL

Sequences:

>Translated_224_residues
MFKPKKPKLKTDDNLYKRLSVDDAVVLFVDHQTGLQTLCRDMPADEFKKNVLAMGKIAKYFDLPVVMTTSFEQGPNGPMM
PELKEMFKDAAYIARPGEINAWDNADFVKAVKKTGRKQIIIAGIVTEVCVAFPVLSALAEGYEVFVVTDASGTFNDMSRN
AAWLRMQQEGAQLLTWFAMSNELRRDWREDMEGYLNLFYEISTEYAPLVDSYNAVKNANPKDLL
>Mature_224_residues
MFKPKKPKLKTDDNLYKRLSVDDAVVLFVDHQTGLQTLCRDMPADEFKKNVLAMGKIAKYFDLPVVMTTSFEQGPNGPMM
PELKEMFKDAAYIARPGEINAWDNADFVKAVKKTGRKQIIIAGIVTEVCVAFPVLSALAEGYEVFVVTDASGTFNDMSRN
AAWLRMQQEGAQLLTWFAMSNELRRDWREDMEGYLNLFYEISTEYAPLVDSYNAVKNANPKDLL

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=200, Percent_Identity=63, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 25385; Mature: 25385

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPKKPKLKTDDNLYKRLSVDDAVVLFVDHQTGLQTLCRDMPADEFKKNVLAMGKIAKY
CCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FDLPVVMTTSFEQGPNGPMMPELKEMFKDAAYIARPGEINAWDNADFVKAVKKTGRKQII
HCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEE
IAGIVTEVCVAFPVLSALAEGYEVFVVTDASGTFNDMSRNAAWLRMQQEGAQLLTWFAMS
HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
NELRRDWREDMEGYLNLFYEISTEYAPLVDSYNAVKNANPKDLL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFKPKKPKLKTDDNLYKRLSVDDAVVLFVDHQTGLQTLCRDMPADEFKKNVLAMGKIAKY
CCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FDLPVVMTTSFEQGPNGPMMPELKEMFKDAAYIARPGEINAWDNADFVKAVKKTGRKQII
HCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEE
IAGIVTEVCVAFPVLSALAEGYEVFVVTDASGTFNDMSRNAAWLRMQQEGAQLLTWFAMS
HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
NELRRDWREDMEGYLNLFYEISTEYAPLVDSYNAVKNANPKDLL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]