| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148654030
Identifier: 148654030
GI number: 148654030
Start: 2774740
End: 2775066
Strand: Direct
Name: 148654030
Synonym: PsycPRwf_2233
Alternate gene names: NA
Gene position: 2774740-2775066 (Clockwise)
Preceding gene: 148654029
Following gene: 148654031
Centisome position: 93.14
GC content: 48.62
Gene sequence:
>327_bases ATGAGCGACTCGTTAACTATCTATAAGCAAATATACCCTACTCAGTGCGCGAAGCTGTCACAGATGGGCTATCGCTCACT GATTAATATTCGTCCAGACCTTGAGACTGAGCATCAGCCCTCAAGTGAAGCGCTAAGTGTCGCCGCTCAGCAAGAAGACT TAGCTTATGTCCACATTCCCTTCGATGAAGAGCGTCTTAGCCGTGCTACCGTCGTACGCTTTGCGGAGCAATATCACGCG CTACCAAAACCTATTATGCTGTTTTGTGGCTCTGGCCACCGCGCCAAGCTGCTTTACCAAAGTGCATTGATGCAAGGTTT GCTATAA
Upstream 100 bases:
>100_bases ACTACCTGGTGTTCAAAACCACGCTAAAATTAACACAAGCCCAAGCTTTGACTGCTCAAAGTCTGTGGCCTCCATTTACT TTTATTAGACACACAAAATT
Downstream 100 bases:
>100_bases GTTATATTGACGTCACCGGTTACGCATAGCACGTATTTATGATTATTTTATAACATCAAAAAACATAACTTTATTGTTAA TAAGGATTTCTTATGTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSDSLTIYKQIYPTQCAKLSQMGYRSLINIRPDLETEHQPSSEALSVAAQQEDLAYVHIPFDEERLSRATVVRFAEQYHA LPKPIMLFCGSGHRAKLLYQSALMQGLL
Sequences:
>Translated_108_residues MSDSLTIYKQIYPTQCAKLSQMGYRSLINIRPDLETEHQPSSEALSVAAQQEDLAYVHIPFDEERLSRATVVRFAEQYHA LPKPIMLFCGSGHRAKLLYQSALMQGLL >Mature_107_residues SDSLTIYKQIYPTQCAKLSQMGYRSLINIRPDLETEHQPSSEALSVAAQQEDLAYVHIPFDEERLSRATVVRFAEQYHAL PKPIMLFCGSGHRAKLLYQSALMQGLL
Specific function: Unknown
COG id: COG3453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12256; Mature: 12125
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSLTIYKQIYPTQCAKLSQMGYRSLINIRPDLETEHQPSSEALSVAAQQEDLAYVHIP CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECC FDEERLSRATVVRFAEQYHALPKPIMLFCGSGHRAKLLYQSALMQGLL CCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SDSLTIYKQIYPTQCAKLSQMGYRSLINIRPDLETEHQPSSEALSVAAQQEDLAYVHIP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECC FDEERLSRATVVRFAEQYHALPKPIMLFCGSGHRAKLLYQSALMQGLL CCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA