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The map label for this gene is ybgL [C]

Identifier: 148654023

GI number: 148654023

Start: 2766774

End: 2767538

Strand: Direct

Name: ybgL [C]

Synonym: PsycPRwf_2226

Alternate gene names: 148654023

Gene position: 2766774-2767538 (Clockwise)

Preceding gene: 148654022

Following gene: 148654024

Centisome position: 92.88

GC content: 46.01

Gene sequence:

>765_bases
ATGACCACTAATTTACCTGTTAATAAACTGCAAACTATTGATTTGAATGCAGATGTGGCTGAAGGCTGTGGCCAAGATAT
TGCTTTAATGAATATTATTAGCTCTGCTAATGTCAGCTGTGGTTTACATGCCGGCTCGTATCAGCACATGCTTGAGACCT
TAAAACTGGCCAAACAGCATAATGTACGAGTCGGGGCACATCCTGGCTTTGATGACAGAGATAACTTTGGGCGCACCGCA
CAGCAGCTACCAGAAGAAGAGTGCCGTGCCCTGATTCATTATCAGCTGGGTGCAGCAAAAGCCATGTGCGATTTGGTTGG
CGTTAAGCTAAGTTATGTCAAGCCGCATGGCGCTTTATATAATCAGGCGGCTAAGGATGAGAAGTTGGCTAAAATTATTG
TCAATGCGGTCAAAAACTTTGATCCAAGCCTAGCAATTATGGGGCTATCGGGTAGTTACCTAATCAGCGTCGCTAAGGCT
CATGGCTTAACCTCAATCTCCGAAGTCTTTGCTGATCGTAACTACGAAAGCGATGGCTCTTTGGTTGCCCGAAGCAAAGA
CAATGCACTGATTACCGATGCGACCCAAGCAGCCCAGCACGCTCTACAAATGATTACCCAAGGCATCGTGACCAGTGTAG
ATGGAGTTCAAGTACCTGTGGAAGCCCAAAGTATTTGCCTCCATGGTGACAGTGAGCATGCTGTGCAGTTCGCAGCTGAG
ATTAAGCAAAAGCTTGAGCAACAAGGTATTCTCATTTGTATCTGA

Upstream 100 bases:

>100_bases
TTTGGCCAAAAATGCCAATTTAAAATGGTCTCCATACAAGAGGCAATACAAGCCCGTCAAGACAGACACCGTTATATTGA
ACGTATTAGGAAATATGCTT

Downstream 100 bases:

>100_bases
TGATTTTAATTTGAGTATGTAAACACCCCTTAACCTTAAAATATTTTAAGACTACTCCTGATAGCTCACCCACAACAAGG
ATGTTTATGACAGCATTAAA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTTNLPVNKLQTIDLNADVAEGCGQDIALMNIISSANVSCGLHAGSYQHMLETLKLAKQHNVRVGAHPGFDDRDNFGRTA
QQLPEEECRALIHYQLGAAKAMCDLVGVKLSYVKPHGALYNQAAKDEKLAKIIVNAVKNFDPSLAIMGLSGSYLISVAKA
HGLTSISEVFADRNYESDGSLVARSKDNALITDATQAAQHALQMITQGIVTSVDGVQVPVEAQSICLHGDSEHAVQFAAE
IKQKLEQQGILICI

Sequences:

>Translated_254_residues
MTTNLPVNKLQTIDLNADVAEGCGQDIALMNIISSANVSCGLHAGSYQHMLETLKLAKQHNVRVGAHPGFDDRDNFGRTA
QQLPEEECRALIHYQLGAAKAMCDLVGVKLSYVKPHGALYNQAAKDEKLAKIIVNAVKNFDPSLAIMGLSGSYLISVAKA
HGLTSISEVFADRNYESDGSLVARSKDNALITDATQAAQHALQMITQGIVTSVDGVQVPVEAQSICLHGDSEHAVQFAAE
IKQKLEQQGILICI
>Mature_253_residues
TTNLPVNKLQTIDLNADVAEGCGQDIALMNIISSANVSCGLHAGSYQHMLETLKLAKQHNVRVGAHPGFDDRDNFGRTAQ
QLPEEECRALIHYQLGAAKAMCDLVGVKLSYVKPHGALYNQAAKDEKLAKIIVNAVKNFDPSLAIMGLSGSYLISVAKAH
GLTSISEVFADRNYESDGSLVARSKDNALITDATQAAQHALQMITQGIVTSVDGVQVPVEAQSICLHGDSEHAVQFAAEI
KQKLEQQGILICI

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=240, Percent_Identity=48.3333333333333, Blast_Score=238, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27247; Mature: 27116

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNLPVNKLQTIDLNADVAEGCGQDIALMNIISSANVSCGLHAGSYQHMLETLKLAKQH
CCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHC
NVRVGAHPGFDDRDNFGRTAQQLPEEECRALIHYQLGAAKAMCDLVGVKLSYVKPHGALY
CEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHH
NQAAKDEKLAKIIVNAVKNFDPSLAIMGLSGSYLISVAKAHGLTSISEVFADRNYESDGS
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
LVARSKDNALITDATQAAQHALQMITQGIVTSVDGVQVPVEAQSICLHGDSEHAVQFAAE
EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHH
IKQKLEQQGILICI
HHHHHHHCCCEEEC
>Mature Secondary Structure 
TTNLPVNKLQTIDLNADVAEGCGQDIALMNIISSANVSCGLHAGSYQHMLETLKLAKQH
CCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHC
NVRVGAHPGFDDRDNFGRTAQQLPEEECRALIHYQLGAAKAMCDLVGVKLSYVKPHGALY
CEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHH
NQAAKDEKLAKIIVNAVKNFDPSLAIMGLSGSYLISVAKAHGLTSISEVFADRNYESDGS
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
LVARSKDNALITDATQAAQHALQMITQGIVTSVDGVQVPVEAQSICLHGDSEHAVQFAAE
EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHH
IKQKLEQQGILICI
HHHHHHHCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA