| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is ubiG [H]
Identifier: 148653914
GI number: 148653914
Start: 2640723
End: 2641511
Strand: Direct
Name: ubiG [H]
Synonym: PsycPRwf_2117
Alternate gene names: 148653914
Gene position: 2640723-2641511 (Clockwise)
Preceding gene: 148653908
Following gene: 148653915
Centisome position: 88.65
GC content: 48.92
Gene sequence:
>789_bases ATGACTCAGACCCATACCGACGCAACCTCTAACACTGCTGCCACTGATAATACCGCCTCTAACCTGGGTAATAATGTTGA TATGAGTGAAGTGGGTAAATTTACTCAACTCGCCAGCCAATGGTGGGACAAACAAGGTCCTTTTGCAACCTTGCATCAGA TTAACCCGCTTCGTTTGAACTGGATAGAAGAGAACGTCATTCGTTACACAGGCACAGGGCTCACCGGAAAAACAGTATTG GATGTGGGCTGTGGCGGCGGTATCTTAACCGAATCTATGGCCCGCCGAGGCGCTGATGCCACCGGTGTGGACTTGGGACT TGAAAATCTACAGGCCGCGACCATACATGCTGAGCAAAGCGGCTTAACTGACCGCCTAAGATACAAGCACATTGCTATTG AACAATTGGCCGCTGAGCAGCCACAGAGCTATGATGTCATCACTTGTATGGAGATGCTAGAGCACGTACCTGACCCCAGC CAAATCGTGCAAGCCTGCTATGATTTACTAAAACCGGGCGGGGTGTGTGTGCTATCGACCATTAACCGCAATCCTAAGTC TTATCTGTTCGCCATTATTGGTGCTGAATATGTGCTGCGTCTACTTGACCGTGGTACCCACGATTATGCCAAATTCATCA CGCCTGCTGAGTTAGACAAGATGGCAATTAATGCCGGCTTCAACCGTCAAGACTTAATCGGTCTACACTACAACCCCATC ACCAAACGCTACTGGTTGGCACAGAATGTTGATGTCAACTACATGATGGCCGTCGTAAAACCCGCTTAA
Upstream 100 bases:
>100_bases ACCATCTCATAATAAGGCATTTTAAGCCCAGTATCGGGTATCAGCCTTATATTATCTTCCCCTATTAACCCCCCTAATAT TTTAAGGTTTAGGACAGCTC
Downstream 100 bases:
>100_bases TTGCCCATTTAGCGCTCTATTTAATGGGCCACTGAGCTTAAGTTTAGCGTTATAAACACACCTTTTAAAAAGTACAACAT TATGTCAACAAATTATGTCA
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTQTHTDATSNTAATDNTASNLGNNVDMSEVGKFTQLASQWWDKQGPFATLHQINPLRLNWIEENVIRYTGTGLTGKTVL DVGCGGGILTESMARRGADATGVDLGLENLQAATIHAEQSGLTDRLRYKHIAIEQLAAEQPQSYDVITCMEMLEHVPDPS QIVQACYDLLKPGGVCVLSTINRNPKSYLFAIIGAEYVLRLLDRGTHDYAKFITPAELDKMAINAGFNRQDLIGLHYNPI TKRYWLAQNVDVNYMMAVVKPA
Sequences:
>Translated_262_residues MTQTHTDATSNTAATDNTASNLGNNVDMSEVGKFTQLASQWWDKQGPFATLHQINPLRLNWIEENVIRYTGTGLTGKTVL DVGCGGGILTESMARRGADATGVDLGLENLQAATIHAEQSGLTDRLRYKHIAIEQLAAEQPQSYDVITCMEMLEHVPDPS QIVQACYDLLKPGGVCVLSTINRNPKSYLFAIIGAEYVLRLLDRGTHDYAKFITPAELDKMAINAGFNRQDLIGLHYNPI TKRYWLAQNVDVNYMMAVVKPA >Mature_261_residues TQTHTDATSNTAATDNTASNLGNNVDMSEVGKFTQLASQWWDKQGPFATLHQINPLRLNWIEENVIRYTGTGLTGKTVLD VGCGGGILTESMARRGADATGVDLGLENLQAATIHAEQSGLTDRLRYKHIAIEQLAAEQPQSYDVITCMEMLEHVPDPSQ IVQACYDLLKPGGVCVLSTINRNPKSYLFAIIGAEYVLRLLDRGTHDYAKFITPAELDKMAINAGFNRQDLIGLHYNPIT KRYWLAQNVDVNYMMAVVKPA
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=241, Percent_Identity=35.6846473029046, Blast_Score=179, Evalue=2e-45, Organism=Escherichia coli, GI1788564, Length=237, Percent_Identity=53.1645569620253, Blast_Score=261, Evalue=4e-71, Organism=Escherichia coli, GI1787151, Length=104, Percent_Identity=33.6538461538462, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115533050, Length=243, Percent_Identity=34.9794238683128, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6324476, Length=302, Percent_Identity=32.1192052980132, Blast_Score=125, Evalue=8e-30, Organism=Drosophila melanogaster, GI24585589, Length=243, Percent_Identity=32.5102880658436, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI281365311, Length=265, Percent_Identity=33.2075471698113, Blast_Score=138, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 28886; Mature: 28755
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTHTDATSNTAATDNTASNLGNNVDMSEVGKFTQLASQWWDKQGPFATLHQINPLRLN CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEE WIEENVIRYTGTGLTGKTVLDVGCGGGILTESMARRGADATGVDLGLENLQAATIHAEQS EECCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHCHHHHHEEEEECHHC GLTDRLRYKHIAIEQLAAEQPQSYDVITCMEMLEHVPDPSQIVQACYDLLKPGGVCVLST CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEE INRNPKSYLFAIIGAEYVLRLLDRGTHDYAKFITPAELDKMAINAGFNRQDLIGLHYNPI CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCHHCEEEECCCCC TKRYWLAQNVDVNYMMAVVKPA HHHEEEECCCCCEEEEEEECCC >Mature Secondary Structure TQTHTDATSNTAATDNTASNLGNNVDMSEVGKFTQLASQWWDKQGPFATLHQINPLRLN CCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEE WIEENVIRYTGTGLTGKTVLDVGCGGGILTESMARRGADATGVDLGLENLQAATIHAEQS EECCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHCHHHHHEEEEECHHC GLTDRLRYKHIAIEQLAAEQPQSYDVITCMEMLEHVPDPSQIVQACYDLLKPGGVCVLST CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEE INRNPKSYLFAIIGAEYVLRLLDRGTHDYAKFITPAELDKMAINAGFNRQDLIGLHYNPI CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCHHCEEEECCCCC TKRYWLAQNVDVNYMMAVVKPA HHHEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA