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The map label for this gene is ybeQ [H]

Identifier: 148653857

GI number: 148653857

Start: 2568779

End: 2569360

Strand: Direct

Name: ybeQ [H]

Synonym: PsycPRwf_2060

Alternate gene names: 148653857

Gene position: 2568779-2569360 (Clockwise)

Preceding gene: 148653856

Following gene: 148653866

Centisome position: 86.23

GC content: 46.74

Gene sequence:

>582_bases
ATGAAACTATTAAAAGCCACTTTATTTACCGCCTTGTTTACCACTGCCGGCCTAGCTCAAGCTGACTTAGTCTCTAACGT
ACCTTTAGACACTTCTCGCTTTGAAATGATGGCTATGGATGAGCTAATCAGCCGTGCCAGCCAAGGTAATGATCACGCCC
AATTTTATTTAGCCAAGCGCTACCAAAAAGGTGAAGGCATCGCCAAAAACCCAATCAAAGCCATCGAATGGTATACCCGC
GCTGCCAATCAAAATGTAACCCCTGCTCAGCTAAACCTTGGCATCATGTATGCTCGCGGTGAAGGCGTTGCGGTTAACGA
ACAGCAAGCTCGTTACTGGTTAGAGCGTGCCGCCAAGCGTGGTGACAACCGTGCCAGCTATACCTTAGCCTTAATCGATG
AAAAGCAGCGCAAGCTGGTTGATGCCTATAAATGGTATGAGCTATCTGCCCGTGACGGTATGTTAAATGAACAAGTACGT
AACAAAGCCCGCGGTAAAATTGGTAAATTGGCCTTAAACTTATCAAGCTCTGATGTGGCCTCTGCTCGCAATCAAGCAGA
CAGCTGGTTCCAAAGCAAATAA

Upstream 100 bases:

>100_bases
AACTTGGCTTACTTTAGATTTTAAGTATTTATATTAAATCTTATAACTGCGCGTTAATTTGAATTTTTTTAAATACAGTC
AATTTCTGGATATACCCCGT

Downstream 100 bases:

>100_bases
GTAAGATACAGGTAGCCAAGCTCTAAGACTTGCGGTCGGGCTTGGCCGTCTAGCTGTAGGAATCCTCTCACTTTTAAGGA
GGGGAGGAAGTCAATGCCTA

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKLLKATLFTALFTTAGLAQADLVSNVPLDTSRFEMMAMDELISRASQGNDHAQFYLAKRYQKGEGIAKNPIKAIEWYTR
AANQNVTPAQLNLGIMYARGEGVAVNEQQARYWLERAAKRGDNRASYTLALIDEKQRKLVDAYKWYELSARDGMLNEQVR
NKARGKIGKLALNLSSSDVASARNQADSWFQSK

Sequences:

>Translated_193_residues
MKLLKATLFTALFTTAGLAQADLVSNVPLDTSRFEMMAMDELISRASQGNDHAQFYLAKRYQKGEGIAKNPIKAIEWYTR
AANQNVTPAQLNLGIMYARGEGVAVNEQQARYWLERAAKRGDNRASYTLALIDEKQRKLVDAYKWYELSARDGMLNEQVR
NKARGKIGKLALNLSSSDVASARNQADSWFQSK
>Mature_193_residues
MKLLKATLFTALFTTAGLAQADLVSNVPLDTSRFEMMAMDELISRASQGNDHAQFYLAKRYQKGEGIAKNPIKAIEWYTR
AANQNVTPAQLNLGIMYARGEGVAVNEQQARYWLERAAKRGDNRASYTLALIDEKQRKLVDAYKWYELSARDGMLNEQVR
NKARGKIGKLALNLSSSDVASARNQADSWFQSK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=90, Percent_Identity=41.1111111111111, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 21670; Mature: 21670

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKATLFTALFTTAGLAQADLVSNVPLDTSRFEMMAMDELISRASQGNDHAQFYLAKR
CHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YQKGEGIAKNPIKAIEWYTRAANQNVTPAQLNLGIMYARGEGVAVNEQQARYWLERAAKR
HHCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEEEEEECCCCEEECHHHHHHHHHHHHHC
GDNRASYTLALIDEKQRKLVDAYKWYELSARDGMLNEQVRNKARGKIGKLALNLSSSDVA
CCCCCEEEEEEECHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCHHHEEEECCCHHHH
SARNQADSWFQSK
HHHHHHHHHHCCC
>Mature Secondary Structure
MKLLKATLFTALFTTAGLAQADLVSNVPLDTSRFEMMAMDELISRASQGNDHAQFYLAKR
CHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YQKGEGIAKNPIKAIEWYTRAANQNVTPAQLNLGIMYARGEGVAVNEQQARYWLERAAKR
HHCCCCCCCCCHHHHHHHHHHCCCCCCHHEEEEEEEEECCCCEEECHHHHHHHHHHHHHC
GDNRASYTLALIDEKQRKLVDAYKWYELSARDGMLNEQVRNKARGKIGKLALNLSSSDVA
CCCCCEEEEEEECHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCHHHEEEECCCHHHH
SARNQADSWFQSK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]