| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is ftnB [H]
Identifier: 148653852
GI number: 148653852
Start: 2564109
End: 2564651
Strand: Direct
Name: ftnB [H]
Synonym: PsycPRwf_2055
Alternate gene names: 148653852
Gene position: 2564109-2564651 (Clockwise)
Preceding gene: 148653851
Following gene: 148653853
Centisome position: 86.07
GC content: 41.99
Gene sequence:
>543_bases ATGAGCGACAAGCGTATTTCTGACAGTATGGAAAAAGCACTAAATGAACAGATGAATAATGAAGCTGCGCAAGCTCAAGC CTATTTATCATTAGGTGTGTGGGCAGATTCAAATAACTACTCTGGTATTGCTGAATTCTTCTATAAGCACTCAGAAGAAG AGCGCCAGCATATGTTCAAGTTTTTAGAATATATTCAGGCCCGTGGCGGTGAAGCAAAAATCGGCTCTATCCCTGCGCCG CGTGATAACCCAGTAGATCTTGAGTCTTGTATTGAAGATGTATGGCAACACGAACTTGATAACTCTAAAAAAATCTATGC GCTAGTAGACAAAGCGTTAGAAGAAAAAGACTGGCCAACGTTCAACTTTTTACAATGGTTCGTAAAAGAGCAAATTGAAG AAGAAGCCTTAATTGATGGTCTGCGTGATAAGTATGCCTTGGCCTCTGAGAGTAAAGATAACAATGCCAACTTCTACTCC TTAGACCGCGATATGGCAGGCGCCTCTCAAGAAGCTGAGCTGCCTCGTGATCAAAAACTGTAG
Upstream 100 bases:
>100_bases ATATATAGATTAGATATATAGATTTAGATATATAAAAAGCGGATTAGCGTTGGCCAACGTTTTGTAATGACTAAAATAAA TAAATTATAAGGATAAGATA
Downstream 100 bases:
>100_bases TCGTAAAACTGGTTTATCCTTCATATTCACAAGTATATTTACAAGGCCTAAGTCATTTAAGGCATAGGTGAGGACATTGT TATGAAAAACCCTATAGATA
Product: Dps family ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSDKRISDSMEKALNEQMNNEAAQAQAYLSLGVWADSNNYSGIAEFFYKHSEEERQHMFKFLEYIQARGGEAKIGSIPAP RDNPVDLESCIEDVWQHELDNSKKIYALVDKALEEKDWPTFNFLQWFVKEQIEEEALIDGLRDKYALASESKDNNANFYS LDRDMAGASQEAELPRDQKL
Sequences:
>Translated_180_residues MSDKRISDSMEKALNEQMNNEAAQAQAYLSLGVWADSNNYSGIAEFFYKHSEEERQHMFKFLEYIQARGGEAKIGSIPAP RDNPVDLESCIEDVWQHELDNSKKIYALVDKALEEKDWPTFNFLQWFVKEQIEEEALIDGLRDKYALASESKDNNANFYS LDRDMAGASQEAELPRDQKL >Mature_179_residues SDKRISDSMEKALNEQMNNEAAQAQAYLSLGVWADSNNYSGIAEFFYKHSEEERQHMFKFLEYIQARGGEAKIGSIPAPR DNPVDLESCIEDVWQHELDNSKKIYALVDKALEEKDWPTFNFLQWFVKEQIEEEALIDGLRDKYALASESKDNNANFYSL DRDMAGASQEAELPRDQKL
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=157, Percent_Identity=33.1210191082803, Blast_Score=103, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 20754; Mature: 20623
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKRISDSMEKALNEQMNNEAAQAQAYLSLGVWADSNNYSGIAEFFYKHSEEERQHMFK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCHHHHHHHHH FLEYIQARGGEAKIGSIPAPRDNPVDLESCIEDVWQHELDNSKKIYALVDKALEEKDWPT HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH FNFLQWFVKEQIEEEALIDGLRDKYALASESKDNNANFYSLDRDMAGASQEAELPRDQKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SDKRISDSMEKALNEQMNNEAAQAQAYLSLGVWADSNNYSGIAEFFYKHSEEERQHMFK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCHHHHHHHHH FLEYIQARGGEAKIGSIPAPRDNPVDLESCIEDVWQHELDNSKKIYALVDKALEEKDWPT HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH FNFLQWFVKEQIEEEALIDGLRDKYALASESKDNNANFYSLDRDMAGASQEAELPRDQKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]