| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is ohrA [H]
Identifier: 148653844
GI number: 148653844
Start: 2553014
End: 2553424
Strand: Direct
Name: ohrA [H]
Synonym: PsycPRwf_2047
Alternate gene names: 148653844
Gene position: 2553014-2553424 (Clockwise)
Preceding gene: 148653829
Following gene: 148653845
Centisome position: 85.7
GC content: 45.01
Gene sequence:
>411_bases ATGAAAACTTTATATACCACTCAAGCCACAGTAACTGGCGGTCGTACTGGTTCAGCGGCATTAAATGACAGTGATTTAAC CATTGACATGAAAGCGCCAGGTACCGGTAAAGGTAATAACCCTGAACAGCTCTTCGCTATGGGTTATGCCGCTTGCTTTG ATAGTGCGTTAGGTGTGGTCAAGCAAATGCAAAAGCTTAAATTTGATTCTACTACGCAAGCTGAAGTTCGCCTATTACAA GGTGATGGCCATGACTACAATCTGGCAGTTAAATTACATGTGATCGCGTCTAACACCGAGGCAAGTGCTGAAGAGATTCA AAAGGCCGTAGAAGCGGCTCATGAAGTCTGCCCCTACTCTAAAGCCACACGTGGCAATATCGACGTTGAAGTCAGCTCTG AGCTTAAATAG
Upstream 100 bases:
>100_bases AGCCATCAACGCAACATAGTAAGCATTTTGTTATGCTAAGCCTAGATGTTGTAAAAACCTCTTAAAATGTAATGACTATA AATTATAAAAAAGGAATGAT
Downstream 100 bases:
>100_bases AGCTTTTAACGCCAACCGTCTTTAAGTGCTCTAAGTACATTCTCTACCTTTAATAGCCCAAACCGCCTTTGCGCCGTTTG GGCTTTTTATTCAGCCGATT
Product: OsmC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKTLYTTQATVTGGRTGSAALNDSDLTIDMKAPGTGKGNNPEQLFAMGYAACFDSALGVVKQMQKLKFDSTTQAEVRLLQ GDGHDYNLAVKLHVIASNTEASAEEIQKAVEAAHEVCPYSKATRGNIDVEVSSELK
Sequences:
>Translated_136_residues MKTLYTTQATVTGGRTGSAALNDSDLTIDMKAPGTGKGNNPEQLFAMGYAACFDSALGVVKQMQKLKFDSTTQAEVRLLQ GDGHDYNLAVKLHVIASNTEASAEEIQKAVEAAHEVCPYSKATRGNIDVEVSSELK >Mature_136_residues MKTLYTTQATVTGGRTGSAALNDSDLTIDMKAPGTGKGNNPEQLFAMGYAACFDSALGVVKQMQKLKFDSTTQAEVRLLQ GDGHDYNLAVKLHVIASNTEASAEEIQKAVEAAHEVCPYSKATRGNIDVEVSSELK
Specific function: Involved in organic hydroperoxide resistance [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR019953 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 14482; Mature: 14482
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLYTTQATVTGGRTGSAALNDSDLTIDMKAPGTGKGNNPEQLFAMGYAACFDSALGVV CCEEEECEEEEECCCCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KQMQKLKFDSTTQAEVRLLQGDGHDYNLAVKLHVIASNTEASAEEIQKAVEAAHEVCPYS HHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC KATRGNIDVEVSSELK CCCCCCEEEEECCCCC >Mature Secondary Structure MKTLYTTQATVTGGRTGSAALNDSDLTIDMKAPGTGKGNNPEQLFAMGYAACFDSALGVV CCEEEECEEEEECCCCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KQMQKLKFDSTTQAEVRLLQGDGHDYNLAVKLHVIASNTEASAEEIQKAVEAAHEVCPYS HHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC KATRGNIDVEVSSELK CCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11418552 [H]