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The map label for this gene is scpB [H]

Identifier: 148653752

GI number: 148653752

Start: 2438028

End: 2438687

Strand: Direct

Name: scpB [H]

Synonym: PsycPRwf_1955

Alternate gene names: 148653752

Gene position: 2438028-2438687 (Clockwise)

Preceding gene: 148653751

Following gene: 148653753

Centisome position: 81.84

GC content: 47.12

Gene sequence:

>660_bases
ATGCCCAATACGCCTTTTAACTCGCCCCTTACAGTTACCACTGTTTCAGACCCCCATAAGGACAATGATGTGGCAGCAAC
AGGTCAATCGGCACAGGCTGACATGAGCGATACAGCGCAAACTGACCTTAACAATTTTCACCGTTATGATCAGCTAAGCC
GCCGTATTGAAGTGTTGCTACATGCCTCTGAGTCACCTCTGACCGACAGCCAACTTAGAAAACATCTGTCTTTATCAAAG
CCGGAGCTTGAGACTGCTCTGTTAGTCTTACAGCAAAGACTGACCACAGGTGTACTCAGCTTAAGTGAATCTGCCAGCGG
CTATCGGCTACAGATTCGCAGTGAATATAGTGCATTAATTCAACACGTCTTCCCGCAGCGATTAGAGAGCTTAAGTCAGG
CATTGCTTGAGACTTTAAGCGTGATTGCTTATAAACAGCCTGTGACCCGAGGTGATATTGAGCAGGTGCGAGGTGTCACC
GTATCTAGCAATATATTAAGGCAGCTGTTTGATAAAGGCTGGATTATTGAAAAAGGCTATCGAGAGACTCTAGGGCGCCC
TGCCCTTTTGCATACCACGCCACAGTTTTTGGATGCCTTTGGGCTTGAGAGCTTGGAGCAGTTGCCGCCACTTCCTGATT
TAAATTTGCAAAGTGACTAG

Upstream 100 bases:

>100_bases
AGTTTAAAGCTGCGCTGGGTCGCTTAATTCTTTATTGACTATGATGCCAACCCTCCTCGTCTGTGTGACCCCCCTTTAAT
TTTTAAAAGCCTTACTGATT

Downstream 100 bases:

>100_bases
GGCATTCAAGCCAAGCGGTAGGCATCTCATTGATAACTATCTATGATGTAAAAACAGACTATGATGTAAAAATAGACAGG
CAGTCATATTTGCATAGCTT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MPNTPFNSPLTVTTVSDPHKDNDVAATGQSAQADMSDTAQTDLNNFHRYDQLSRRIEVLLHASESPLTDSQLRKHLSLSK
PELETALLVLQQRLTTGVLSLSESASGYRLQIRSEYSALIQHVFPQRLESLSQALLETLSVIAYKQPVTRGDIEQVRGVT
VSSNILRQLFDKGWIIEKGYRETLGRPALLHTTPQFLDAFGLESLEQLPPLPDLNLQSD

Sequences:

>Translated_219_residues
MPNTPFNSPLTVTTVSDPHKDNDVAATGQSAQADMSDTAQTDLNNFHRYDQLSRRIEVLLHASESPLTDSQLRKHLSLSK
PELETALLVLQQRLTTGVLSLSESASGYRLQIRSEYSALIQHVFPQRLESLSQALLETLSVIAYKQPVTRGDIEQVRGVT
VSSNILRQLFDKGWIIEKGYRETLGRPALLHTTPQFLDAFGLESLEQLPPLPDLNLQSD
>Mature_218_residues
PNTPFNSPLTVTTVSDPHKDNDVAATGQSAQADMSDTAQTDLNNFHRYDQLSRRIEVLLHASESPLTDSQLRKHLSLSKP
ELETALLVLQQRLTTGVLSLSESASGYRLQIRSEYSALIQHVFPQRLESLSQALLETLSVIAYKQPVTRGDIEQVRGVTV
SSNILRQLFDKGWIIEKGYRETLGRPALLHTTPQFLDAFGLESLEQLPPLPDLNLQSD

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 24417; Mature: 24286

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNTPFNSPLTVTTVSDPHKDNDVAATGQSAQADMSDTAQTDLNNFHRYDQLSRRIEVLL
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HASESPLTDSQLRKHLSLSKPELETALLVLQQRLTTGVLSLSESASGYRLQIRSEYSALI
HCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
QHVFPQRLESLSQALLETLSVIAYKQPVTRGDIEQVRGVTVSSNILRQLFDKGWIIEKGY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHCCCEECCCH
RETLGRPALLHTTPQFLDAFGLESLEQLPPLPDLNLQSD
HHHCCCCCEECCCHHHHHHHCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PNTPFNSPLTVTTVSDPHKDNDVAATGQSAQADMSDTAQTDLNNFHRYDQLSRRIEVLL
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HASESPLTDSQLRKHLSLSKPELETALLVLQQRLTTGVLSLSESASGYRLQIRSEYSALI
HCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
QHVFPQRLESLSQALLETLSVIAYKQPVTRGDIEQVRGVTVSSNILRQLFDKGWIIEKGY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHCCCEECCCH
RETLGRPALLHTTPQFLDAFGLESLEQLPPLPDLNLQSD
HHHCCCCCEECCCHHHHHHHCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]