Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is engD [H]

Identifier: 148653706

GI number: 148653706

Start: 2371635

End: 2372726

Strand: Direct

Name: engD [H]

Synonym: PsycPRwf_1909

Alternate gene names: 148653706

Gene position: 2371635-2372726 (Clockwise)

Preceding gene: 148653705

Following gene: 148653707

Centisome position: 79.61

GC content: 46.89

Gene sequence:

>1092_bases
ATGGGCTTTAATTGTGGCATCGTGGGCTTACCAAACGTTGGAAAATCAACTTTATTTAATGCGTTAACCAAAGCGGGTAT
TGCCGCAGAAAACTTTCCATTTTGTACCAAAGATCCTAACGTCGGTATCGTACCTGTACCTGATCCACGTCTAAACAAAC
TGGCCGAAATTGTAAAGCCTGAGCGTGTATTGCCGACCACTATGGAATTTGTGGATATTGCTGGTCTGGTAGCTGGCGCA
TCACAAGGTGAAGGGATGGGTAACCAGTTCTTAGCCAATATCCGTGAGACCGATGCGATCGCTCACGTGGTACGCTGCTT
CGATGATGACAACGTCATCCACGTAGATGGCCGTGTCAGCCCTATTGATGATATCGAAACCATCAATACTGAGCTGGCTT
TGGCTGACTTAGAAGCCGTTGAGCGTGCTATTGTGAACTTGACTAAAAAGGCTAAGGGCAATGACAAAGATGCTCAAGCC
ACCCTTGATGTGTTCAAAAAAATCGAACCTTTATTGGCCGAAGGCAAAGCTGCGCGCGGTGCCAACTTAGATCAAGATGA
GAAAAAGCTGATTAAAAGCTATGGCCTAATCACTTTAAAGCCCACCATGTATATTGCCAACGTCAGTGAAGATGGATTTG
AGAACAATCCTTATCTTGACGCTGTTCGTGACTATGCTGCCAAAGAAGAGGCAATCGTATTGCCTTTATGCAACCAAATT
GAAGCAGAAATCTCTCAATTAGATGAGGCAGATAAAGCCGACTTCTTAGAGGGCATGGGCATGGAAGAGGCAGGTCTTGA
CCAAGTCATTCGCTTGGGCTACAAACTGCTCGATATGCAAACTTACTTCACCGCTGGTGTTAAAGAAGTACGTGCCTGGA
CTGTCAAAGTGGGCGCCACGGCACCTGAAGCGGCTGGGGTTATCCACACTGACTTTGAGCGCGGCTTCATTCGTGCCGAA
GTGATTGCTTATGAAGACTTCATTGAGCATGGCGGCGAAAAAGGCGCAGCTGCTGCCGGTAAATCTCGCTTAGAGGGCAA
GACCTATATCGTCCAAGATGGCGATGTGATGCACTTTAGATTTAACGTGTAG

Upstream 100 bases:

>100_bases
AACCTCATATCCAAGGGTCGTTTTTATTGATTGTTATTGATGAGCGATCTTCCACTTTATTTTATTACCTTAAATCACAT
CAAATTAAGAGAGACAAATC

Downstream 100 bases:

>100_bases
CTTTAGCTTTACGCTGATAAAAAGTAAATAGCAGCTCACGTTACTTAGGGTAAAAGACTCTTTATTTTGCCCTAATGCTG
AGACCTAAAAAAGCCGACCT

Product: GTP-dependent nucleic acid-binding protein EngD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNVGIVPVPDPRLNKLAEIVKPERVLPTTMEFVDIAGLVAGA
SQGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVSPIDDIETINTELALADLEAVERAIVNLTKKAKGNDKDAQA
TLDVFKKIEPLLAEGKAARGANLDQDEKKLIKSYGLITLKPTMYIANVSEDGFENNPYLDAVRDYAAKEEAIVLPLCNQI
EAEISQLDEADKADFLEGMGMEEAGLDQVIRLGYKLLDMQTYFTAGVKEVRAWTVKVGATAPEAAGVIHTDFERGFIRAE
VIAYEDFIEHGGEKGAAAAGKSRLEGKTYIVQDGDVMHFRFNV

Sequences:

>Translated_363_residues
MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNVGIVPVPDPRLNKLAEIVKPERVLPTTMEFVDIAGLVAGA
SQGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVSPIDDIETINTELALADLEAVERAIVNLTKKAKGNDKDAQA
TLDVFKKIEPLLAEGKAARGANLDQDEKKLIKSYGLITLKPTMYIANVSEDGFENNPYLDAVRDYAAKEEAIVLPLCNQI
EAEISQLDEADKADFLEGMGMEEAGLDQVIRLGYKLLDMQTYFTAGVKEVRAWTVKVGATAPEAAGVIHTDFERGFIRAE
VIAYEDFIEHGGEKGAAAAGKSRLEGKTYIVQDGDVMHFRFNV
>Mature_362_residues
GFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNVGIVPVPDPRLNKLAEIVKPERVLPTTMEFVDIAGLVAGAS
QGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVSPIDDIETINTELALADLEAVERAIVNLTKKAKGNDKDAQAT
LDVFKKIEPLLAEGKAARGANLDQDEKKLIKSYGLITLKPTMYIANVSEDGFENNPYLDAVRDYAAKEEAIVLPLCNQIE
AEISQLDEADKADFLEGMGMEEAGLDQVIRLGYKLLDMQTYFTAGVKEVRAWTVKVGATAPEAAGVIHTDFERGFIRAEV
IAYEDFIEHGGEKGAAAAGKSRLEGKTYIVQDGDVMHFRFNV

Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]

COG id: COG0012

COG function: function code J; Predicted GTPase, probable translation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI58761500, Length=365, Percent_Identity=43.5616438356164, Blast_Score=310, Evalue=1e-84,
Organism=Homo sapiens, GI58761502, Length=218, Percent_Identity=36.697247706422, Blast_Score=159, Evalue=3e-39,
Organism=Escherichia coli, GI1787454, Length=363, Percent_Identity=68.3195592286501, Blast_Score=524, Evalue=1e-150,
Organism=Caenorhabditis elegans, GI17509631, Length=362, Percent_Identity=41.9889502762431, Blast_Score=299, Evalue=2e-81,
Organism=Saccharomyces cerevisiae, GI6319499, Length=369, Percent_Identity=39.2953929539295, Blast_Score=256, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6321773, Length=382, Percent_Identity=33.2460732984293, Blast_Score=196, Evalue=5e-51,
Organism=Saccharomyces cerevisiae, GI6321649, Length=145, Percent_Identity=37.9310344827586, Blast_Score=81, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24640873, Length=363, Percent_Identity=42.6997245179063, Blast_Score=297, Evalue=7e-81,
Organism=Drosophila melanogaster, GI24640877, Length=363, Percent_Identity=42.6997245179063, Blast_Score=297, Evalue=7e-81,
Organism=Drosophila melanogaster, GI24640875, Length=363, Percent_Identity=42.6997245179063, Blast_Score=297, Evalue=7e-81,
Organism=Drosophila melanogaster, GI24640879, Length=325, Percent_Identity=40, Blast_Score=244, Evalue=5e-65,
Organism=Drosophila melanogaster, GI24585318, Length=174, Percent_Identity=28.1609195402299, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR004396
- InterPro:   IPR013029
- InterPro:   IPR006073
- InterPro:   IPR002917
- InterPro:   IPR012676
- InterPro:   IPR023192 [H]

Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]

EC number: NA

Molecular weight: Translated: 39406; Mature: 39275

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNVGIVPVPDPRLNKLAEIVKP
CCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCC
ERVLPTTMEFVDIAGLVAGASQGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVS
CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
PIDDIETINTELALADLEAVERAIVNLTKKAKGNDKDAQATLDVFKKIEPLLAEGKAARG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
ANLDQDEKKLIKSYGLITLKPTMYIANVSEDGFENNPYLDAVRDYAAKEEAIVLPLCNQI
CCCCHHHHHHHHHCCCEEEECEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECHHHH
EAEISQLDEADKADFLEGMGMEEAGLDQVIRLGYKLLDMQTYFTAGVKEVRAWTVKVGAT
HHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCC
APEAAGVIHTDFERGFIRAEVIAYEDFIEHGGEKGAAAAGKSRLEGKTYIVQDGDVMHFR
CCCCCCCEEECHHCCCHHHHHHHHHHHHHCCCCCCCHHHCHHHCCCCEEEEECCCEEEEE
FNV
ECC
>Mature Secondary Structure 
GFNCGIVGLPNVGKSTLFNALTKAGIAAENFPFCTKDPNVGIVPVPDPRLNKLAEIVKP
CCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCC
ERVLPTTMEFVDIAGLVAGASQGEGMGNQFLANIRETDAIAHVVRCFDDDNVIHVDGRVS
CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
PIDDIETINTELALADLEAVERAIVNLTKKAKGNDKDAQATLDVFKKIEPLLAEGKAARG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
ANLDQDEKKLIKSYGLITLKPTMYIANVSEDGFENNPYLDAVRDYAAKEEAIVLPLCNQI
CCCCHHHHHHHHHCCCEEEECEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECHHHH
EAEISQLDEADKADFLEGMGMEEAGLDQVIRLGYKLLDMQTYFTAGVKEVRAWTVKVGAT
HHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCC
APEAAGVIHTDFERGFIRAEVIAYEDFIEHGGEKGAAAAGKSRLEGKTYIVQDGDVMHFR
CCCCCCCEEECHHCCCHHHHHHHHHHHHHCCCCCCCHHHCHHHCCCCEEEEECCCEEEEE
FNV
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA