| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653677
Identifier: 148653677
GI number: 148653677
Start: 2338441
End: 2338956
Strand: Direct
Name: 148653677
Synonym: PsycPRwf_1880
Alternate gene names: NA
Gene position: 2338441-2338956 (Clockwise)
Preceding gene: 148653676
Following gene: 148653679
Centisome position: 78.5
GC content: 44.96
Gene sequence:
>516_bases ATGTCAACTCATAACCCTTCTGATTACGAGTCATTAGACTCTGAGCATACTTCTTACACTGACGACGACACGGCCTTTGA AGCAACTAGTGGTGCTGAGCTAGAAGCCGCGGACTCTGGGCACAACTCTGATATCGAAATTATTACCCCAGATGACCTAA CTGATACCTCAAGCGCTTTTGAAAATCAGCCTGAGCAGACACAAGATGAGGCCCCACAAGAGCCTCAATTCATGCCAGTT GATATTACCATCTTAGAAAAAAATTATACTATTAACTGCCCAGTGGGTGAAGAAGGCGAGCTGTATTCAGCCAGCCAATT TATCAATAGTTTTATCCAAGATCTACAGGCCAATGCCCCGCAGCTGCCTCAAGAGAATCTATTGGTACTGTGCTGCTTAA ATCTGTATGAAAAAATGCAACAAGCCAAGCTACAAGCAGCCGCTAATGAAAGCGACATCGCGCAGGCCAATGAGCTGTTA GAGCATATGATTCGTGAGATGCAGCTTAGCGACTAA
Upstream 100 bases:
>100_bases ACCTGTTCAGTGCCTTTTATGGCCACCGGCTAAATTAACTGTATTTTATTTGACCTTTTTTTGCCTTTTATTTTATTGGT CCATTATTTAAGAGAACATC
Downstream 100 bases:
>100_bases AAAGCGCTAGTGAGATGGTGGCTTGGTAGACTGTGCATGGAAGTCGGCTTGATGGTCATAGTTACAAAAAAACCAGCTGG TGAGCTGCTTTAGCGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSTHNPSDYESLDSEHTSYTDDDTAFEATSGAELEAADSGHNSDIEIITPDDLTDTSSAFENQPEQTQDEAPQEPQFMPV DITILEKNYTINCPVGEEGELYSASQFINSFIQDLQANAPQLPQENLLVLCCLNLYEKMQQAKLQAAANESDIAQANELL EHMIREMQLSD
Sequences:
>Translated_171_residues MSTHNPSDYESLDSEHTSYTDDDTAFEATSGAELEAADSGHNSDIEIITPDDLTDTSSAFENQPEQTQDEAPQEPQFMPV DITILEKNYTINCPVGEEGELYSASQFINSFIQDLQANAPQLPQENLLVLCCLNLYEKMQQAKLQAAANESDIAQANELL EHMIREMQLSD >Mature_170_residues STHNPSDYESLDSEHTSYTDDDTAFEATSGAELEAADSGHNSDIEIITPDDLTDTSSAFENQPEQTQDEAPQEPQFMPVD ITILEKNYTINCPVGEEGELYSASQFINSFIQDLQANAPQLPQENLLVLCCLNLYEKMQQAKLQAAANESDIAQANELLE HMIREMQLSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19008; Mature: 18876
Theoretical pI: Translated: 3.52; Mature: 3.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTHNPSDYESLDSEHTSYTDDDTAFEATSGAELEAADSGHNSDIEIITPDDLTDTSSAF CCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCEEEECCCCCCCCHHHH ENQPEQTQDEAPQEPQFMPVDITILEKNYTINCPVGEEGELYSASQFINSFIQDLQANAP CCCCCCHHHCCCCCCCEEEEEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC QLPQENLLVLCCLNLYEKMQQAKLQAAANESDIAQANELLEHMIREMQLSD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STHNPSDYESLDSEHTSYTDDDTAFEATSGAELEAADSGHNSDIEIITPDDLTDTSSAF CCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCEEEECCCCCCCCHHHH ENQPEQTQDEAPQEPQFMPVDITILEKNYTINCPVGEEGELYSASQFINSFIQDLQANAP CCCCCCHHHCCCCCCCEEEEEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC QLPQENLLVLCCLNLYEKMQQAKLQAAANESDIAQANELLEHMIREMQLSD CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA