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The map label for this gene is yaaD [H]

Identifier: 148653661

GI number: 148653661

Start: 2319783

End: 2320295

Strand: Direct

Name: yaaD [H]

Synonym: PsycPRwf_1864

Alternate gene names: 148653661

Gene position: 2319783-2320295 (Clockwise)

Preceding gene: 148653655

Following gene: 148653662

Centisome position: 77.87

GC content: 45.61

Gene sequence:

>513_bases
ATGAGTAATTCAAATAATACCGCCGCAGATTTCATTAATCCAAACCAAGACACCCGCATCACCCAAGGCAGCCAAGTAGC
GCTACACTTTGAGGTGGCTTTAGAAAATGGAACGGTTATTGACTCTACCTTTAGCCGCCCAGAGCCGGTACGTTTGACCA
TAGGCGATGAAAGCTTACTGCCAGGCTTTGAGAATGTACTTAATAACTTGCGTGCCGGTGATACCCGTACAGCGCATTTA
GAGCCGGAGCAAGCTTTTGGCGAGTGGAACAAAGATAATGTACAGACCTTTAGCCGCACTCAATTTGCATTGACTGAAGC
CAATCCTGAAGTGGGTATGATGATTGAGTTTGAGGACAAGGGAAAAAACACCTTACCAGGCGTTATTAGCAAAGTGACCC
AAGAAGACGTTGAAGTGGATTTCAACCATCCCTTAGCCGGTCAATCGCTACTGTTTAAAGTTCAGATATTTAAAGTGACT
CCGCCAGGTCAAGTGGCCGTGCAATTAATGTGA

Upstream 100 bases:

>100_bases
CATCGTTTTAATCAGCCCTTTAGTCTTTATATCCTTATTATAAAGCCCCTGTACACAACTCTTTTAATTTCTCCCATCTC
TGATAAATAAGTGATTGCCC

Downstream 100 bases:

>100_bases
TGCAACTGATCTAAATAAGGACATCAATCATGTGGCCTATTTAGGTATAGCTAAACCTCTAATAAAACATACAACCACGA
AAAAGGTATCGATTATGAAA

Product: FKBP-type peptidylprolyl isomerase

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSNSNNTAADFINPNQDTRITQGSQVALHFEVALENGTVIDSTFSRPEPVRLTIGDESLLPGFENVLNNLRAGDTRTAHL
EPEQAFGEWNKDNVQTFSRTQFALTEANPEVGMMIEFEDKGKNTLPGVISKVTQEDVEVDFNHPLAGQSLLFKVQIFKVT
PPGQVAVQLM

Sequences:

>Translated_170_residues
MSNSNNTAADFINPNQDTRITQGSQVALHFEVALENGTVIDSTFSRPEPVRLTIGDESLLPGFENVLNNLRAGDTRTAHL
EPEQAFGEWNKDNVQTFSRTQFALTEANPEVGMMIEFEDKGKNTLPGVISKVTQEDVEVDFNHPLAGQSLLFKVQIFKVT
PPGQVAVQLM
>Mature_169_residues
SNSNNTAADFINPNQDTRITQGSQVALHFEVALENGTVIDSTFSRPEPVRLTIGDESLLPGFENVLNNLRAGDTRTAHLE
PEQAFGEWNKDNVQTFSRTQFALTEANPEVGMMIEFEDKGKNTLPGVISKVTQEDVEVDFNHPLAGQSLLFKVQIFKVTP
PGQVAVQLM

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=138, Percent_Identity=38.4057971014493, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 18759; Mature: 18628

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSNNTAADFINPNQDTRITQGSQVALHFEVALENGTVIDSTFSRPEPVRLTIGDESLL
CCCCCCCEEECCCCCCCCEEECCCEEEEEEEEEECCCEEEECCCCCCCCEEEEECCCCCC
PGFENVLNNLRAGDTRTAHLEPEQAFGEWNKDNVQTFSRTQFALTEANPEVGMMIEFEDK
CCHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCCEEECCEEEEEEECCCCEEEEEEECCC
GKNTLPGVISKVTQEDVEVDFNHPLAGQSLLFKVQIFKVTPPGQVAVQLM
CCCCCCHHHHHHHHHHCEEECCCCCCCCEEEEEEEEEEECCCCCEEEEEC
>Mature Secondary Structure 
SNSNNTAADFINPNQDTRITQGSQVALHFEVALENGTVIDSTFSRPEPVRLTIGDESLL
CCCCCCEEECCCCCCCCEEECCCEEEEEEEEEECCCEEEECCCCCCCCEEEEECCCCCC
PGFENVLNNLRAGDTRTAHLEPEQAFGEWNKDNVQTFSRTQFALTEANPEVGMMIEFEDK
CCHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCCEEECCEEEEEEECCCCEEEEEEECCC
GKNTLPGVISKVTQEDVEVDFNHPLAGQSLLFKVQIFKVTPPGQVAVQLM
CCCCCCHHHHHHHHHHCEEECCCCCCCCEEEEEEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2121716 [H]