| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653649
Identifier: 148653649
GI number: 148653649
Start: 2304979
End: 2306376
Strand: Direct
Name: 148653649
Synonym: PsycPRwf_1852
Alternate gene names: NA
Gene position: 2304979-2306376 (Clockwise)
Preceding gene: 148653648
Following gene: 148653650
Centisome position: 77.37
GC content: 47.21
Gene sequence:
>1398_bases ATGTTTACCGCAAATTTTAATAATTTGATTTTAAATTCTGACAGTTATAAGACCTCACACTGGCTACAATATCCACCTGG TAGTGAGTATATGTCAAGCTATGTCGAGGCGCGTAAAGGCGACTATGATGTGGTGTTTTTTGGTCTACAAGCTTTTATAA AAGAATACCTTAATAAGCCGATTACCACAGCGGATATCGATGACGCTGAGCTGGTGATTAAAGCGCATGGCCTGCCTTTT AATCGCAGCGGCTGGGAGCGCCTAGTCGAAAAACATAACGGCTACTTACCCATTCGTATTCAAGCAGTGCCCGAAGGCAG CTTGGTTCCTGTATCTAATGTGGTGTGCCAAATCATTAATACCGATCCTGAGTTTTATTGGCTGCCAAGCTATCTTGAGA CCAGCTTGCTTAGGGCCATTTGGTACCCCTCGACTGTGGCCAGCTTATCGTATTACTGCAAAAATATTATTAAAGCTGCC CTAGAAAAATCTGCAGATAGCAGCGCAGGCTTGCCCTTTAAGCTGCATGATTTTGGTGCTCGCGGAGCTTCTAGCATGGA GTCTGTGGCATTAGGTAGCCTTGCACATTTGGTTAATTTCTCAGGTACTGACAGTATGACGGCACTGGTTGCTGCAAGCC GCTGGTATGGCATGAGCGATAACATGCCAGCCTTCTCAATCCCAGCCGCTGAGCACAGTACTATGACCGCCTGGGGCCGT GAGCGTGAGACTCAGGCCTATGCCAATATGCTCGATCAATTCGGCGGTGAAGGTCACATGGTCGCTGTGGTGTCTGACAG CTATAACTTATGGAATGCCATTGATAATATTTGGGGTGATGCGCTTAAACAGCAGGTAGAAACCATGGGAGGCACCTTAG TGGTCCGTCCAGACAGTGGTGATCCAGCCAAAGTCGTGCGAGAGGCACTCGAGCGCTTATCGGTCAAATTTGGATACCGT GTTAATAGTAAAGGCTACAAGGTTTTGCCAGACTATGTACGCCTAATTCAAGGTGATGGCATTAGTCCGCAGAGTCTAGG TAAAATTTTAGACACCATTATGCAAGCAGGCTTTAGTGCCGATAATGTCACCTTTGGCATGGGCGGCGGCTTATTACAAC AAGTCAACCGCGATACCATGAGCTGGGCAATGAAGGCCAGTGCCATTCGCATCGATGGTGAGTTGAAAGATATCTTTAAA GACCCCATCACTAGCCGCTCAAAGCGCTCGAAAAAAGGCCGCTTGGCATTAATTAAGCAGACCAATGGCACGCTCACCAC CATTAAAGAGGACAGCTTAAACTCCCCCGAAGACAACTTACTACGCGATGTCTTTGTCGATGGTAAGCTGTTAGTCGATG ATAATCTAACCACCATCCGTCAACGTACTGGCTGGTAG
Upstream 100 bases:
>100_bases GATGGCTATTTTATGGTTTTGCCCCAAGCGATAGACGCAGTGGGTTTTTAGACGGCACTCAATTATCGAGTGTCTTACAA TCAAGCAGAGGAGTTCTGTG
Downstream 100 bases:
>100_bases CGTCAACACTCATTTTTATGGTGCTTTTATTGCAGCCTAGCCCATAAAATAAATAAAGCCCGGATTAAGGCTTATTCCGG GCTTTTTTGGGGCTTGATGG
Product: putative nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MFTANFNNLILNSDSYKTSHWLQYPPGSEYMSSYVEARKGDYDVVFFGLQAFIKEYLNKPITTADIDDAELVIKAHGLPF NRSGWERLVEKHNGYLPIRIQAVPEGSLVPVSNVVCQIINTDPEFYWLPSYLETSLLRAIWYPSTVASLSYYCKNIIKAA LEKSADSSAGLPFKLHDFGARGASSMESVALGSLAHLVNFSGTDSMTALVAASRWYGMSDNMPAFSIPAAEHSTMTAWGR ERETQAYANMLDQFGGEGHMVAVVSDSYNLWNAIDNIWGDALKQQVETMGGTLVVRPDSGDPAKVVREALERLSVKFGYR VNSKGYKVLPDYVRLIQGDGISPQSLGKILDTIMQAGFSADNVTFGMGGGLLQQVNRDTMSWAMKASAIRIDGELKDIFK DPITSRSKRSKKGRLALIKQTNGTLTTIKEDSLNSPEDNLLRDVFVDGKLLVDDNLTTIRQRTGW
Sequences:
>Translated_465_residues MFTANFNNLILNSDSYKTSHWLQYPPGSEYMSSYVEARKGDYDVVFFGLQAFIKEYLNKPITTADIDDAELVIKAHGLPF NRSGWERLVEKHNGYLPIRIQAVPEGSLVPVSNVVCQIINTDPEFYWLPSYLETSLLRAIWYPSTVASLSYYCKNIIKAA LEKSADSSAGLPFKLHDFGARGASSMESVALGSLAHLVNFSGTDSMTALVAASRWYGMSDNMPAFSIPAAEHSTMTAWGR ERETQAYANMLDQFGGEGHMVAVVSDSYNLWNAIDNIWGDALKQQVETMGGTLVVRPDSGDPAKVVREALERLSVKFGYR VNSKGYKVLPDYVRLIQGDGISPQSLGKILDTIMQAGFSADNVTFGMGGGLLQQVNRDTMSWAMKASAIRIDGELKDIFK DPITSRSKRSKKGRLALIKQTNGTLTTIKEDSLNSPEDNLLRDVFVDGKLLVDDNLTTIRQRTGW >Mature_465_residues MFTANFNNLILNSDSYKTSHWLQYPPGSEYMSSYVEARKGDYDVVFFGLQAFIKEYLNKPITTADIDDAELVIKAHGLPF NRSGWERLVEKHNGYLPIRIQAVPEGSLVPVSNVVCQIINTDPEFYWLPSYLETSLLRAIWYPSTVASLSYYCKNIIKAA LEKSADSSAGLPFKLHDFGARGASSMESVALGSLAHLVNFSGTDSMTALVAASRWYGMSDNMPAFSIPAAEHSTMTAWGR ERETQAYANMLDQFGGEGHMVAVVSDSYNLWNAIDNIWGDALKQQVETMGGTLVVRPDSGDPAKVVREALERLSVKFGYR VNSKGYKVLPDYVRLIQGDGISPQSLGKILDTIMQAGFSADNVTFGMGGGLLQQVNRDTMSWAMKASAIRIDGELKDIFK DPITSRSKRSKKGRLALIKQTNGTLTTIKEDSLNSPEDNLLRDVFVDGKLLVDDNLTTIRQRTGW
Specific function: Unknown
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI5031977, Length=472, Percent_Identity=42.1610169491525, Blast_Score=366, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR016471 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: NA
Molecular weight: Translated: 51497; Mature: 51497
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTANFNNLILNSDSYKTSHWLQYPPGSEYMSSYVEARKGDYDVVFFGLQAFIKEYLNKP CEECCCCCEEECCCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCC ITTADIDDAELVIKAHGLPFNRSGWERLVEKHNGYLPIRIQAVPEGSLVPVSNVVCQIIN CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHCC TDPEFYWLPSYLETSLLRAIWYPSTVASLSYYCKNIIKAALEKSADSSAGLPFKLHDFGA CCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC RGASSMESVALGSLAHLVNFSGTDSMTALVAASRWYGMSDNMPAFSIPAAEHSTMTAWGR CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHCCC ERETQAYANMLDQFGGEGHMVAVVSDSYNLWNAIDNIWGDALKQQVETMGGTLVVRPDSG HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC DPAKVVREALERLSVKFGYRVNSKGYKVLPDYVRLIQGDGISPQSLGKILDTIMQAGFSA CHHHHHHHHHHHHHHHCCEEECCCCCEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC DNVTFGMGGGLLQQVNRDTMSWAMKASAIRIDGELKDIFKDPITSRSKRSKKGRLALIKQ CCEEEECCCHHHHHHCHHHHHHHHHHCEEEECCHHHHHHHCCCCCCHHCCCCCCEEEEEE TNGTLTTIKEDSLNSPEDNLLRDVFVDGKLLVDDNLTTIRQRTGW CCCCEEEEECCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHCCC >Mature Secondary Structure MFTANFNNLILNSDSYKTSHWLQYPPGSEYMSSYVEARKGDYDVVFFGLQAFIKEYLNKP CEECCCCCEEECCCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCC ITTADIDDAELVIKAHGLPFNRSGWERLVEKHNGYLPIRIQAVPEGSLVPVSNVVCQIIN CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHCC TDPEFYWLPSYLETSLLRAIWYPSTVASLSYYCKNIIKAALEKSADSSAGLPFKLHDFGA CCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC RGASSMESVALGSLAHLVNFSGTDSMTALVAASRWYGMSDNMPAFSIPAAEHSTMTAWGR CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHCCC ERETQAYANMLDQFGGEGHMVAVVSDSYNLWNAIDNIWGDALKQQVETMGGTLVVRPDSG HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC DPAKVVREALERLSVKFGYRVNSKGYKVLPDYVRLIQGDGISPQSLGKILDTIMQAGFSA CHHHHHHHHHHHHHHHCCEEECCCCCEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC DNVTFGMGGGLLQQVNRDTMSWAMKASAIRIDGELKDIFKDPITSRSKRSKKGRLALIKQ CCEEEECCCHHHHHHCHHHHHHHHHHCEEEECCHHHHHHHCCCCCCHHCCCCCCEEEEEE TNGTLTTIKEDSLNSPEDNLLRDVFVDGKLLVDDNLTTIRQRTGW CCCCEEEEECCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]