| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653548
Identifier: 148653548
GI number: 148653548
Start: 2165446
End: 2166237
Strand: Direct
Name: 148653548
Synonym: PsycPRwf_1751
Alternate gene names: NA
Gene position: 2165446-2166237 (Clockwise)
Preceding gene: 148653546
Following gene: 148653551
Centisome position: 72.69
GC content: 45.2
Gene sequence:
>792_bases ATGTCCGCTAAAAAGTTCGATAAGTTTAAAAAATGGCTGCCGGCTATTAGCTTGGCCGTTGTCATTCATCTGATACTCAT TGCGGTGGTCATGAATAGCCAAAAACAAACTGTCATTACAGCAGATAACAGCTTAGTATCAACGCCTACAACCAATGTGG AGGCAGCTTTAATCAATGACGATGAGCTATTAAATGATACTGAGGTATTAACCACTTTAAGTGACACAACAATCATTGAA AAGACCACACAGAGCACTGATAAGGCAGGCGATCAAGCACAGAATAAGCAAGCCGACCAAGATACGGGCAGTGCTACGCA GCAATCTGGCGCAAGTCAAGGCAATAGCGCCTCTAATATTGACAAGGCGTCAAGCAATACAAACACAGACTCTACCAGCC CTGCGCTTCAAGCTAAAGCCAACAAAACCTCTCAAATGGATAACGCCAATACCAATACCACTGCGACATATAGCAGTGCA AGCTCTGAGCCACCCTATCTAGAAAAAAATACCAGTAGCGCCAGCGATCAGCTGTTATTGTCTCGAGATTTGCCACAAGC AGAAGCCCATGGCTTGGCTGAGGAAAAAGGATTTAAGAGTACCGCTCAAGAAGTAGAGGCGCTCAATGACAAATTAGGCC GGATGGTCGATGAGGTAAAAGAACAAAAACTAAAAGAGATTGACGCGCAGCAACAGGCAAGCAAAGCTGCCTATCTTAGA GCCAGAAATATTCAGCTCAGTTCAACTGAGCAAAATCCAGCCGCGACTAAGGACGACCGGGGTGATGAGTAG
Upstream 100 bases:
>100_bases AACAATGTTGGCTAACAAAGCGCTCCATACGACAAATTAAGTCAAATATCATTAAGATGCGGTAGAATAAACCCTCGCAT AAACAAGGAATTTACCATTC
Downstream 100 bases:
>100_bases TGCCTTGTATCTGTAGATTTTGGTTGATATCGTCTAAGCGCTCCGCTGTGCCCACATCTACCCAATTGGCCTGCATCACC TCAGCAGTCACTTGAAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSAKKFDKFKKWLPAISLAVVIHLILIAVVMNSQKQTVITADNSLVSTPTTNVEAALINDDELLNDTEVLTTLSDTTIIE KTTQSTDKAGDQAQNKQADQDTGSATQQSGASQGNSASNIDKASSNTNTDSTSPALQAKANKTSQMDNANTNTTATYSSA SSEPPYLEKNTSSASDQLLLSRDLPQAEAHGLAEEKGFKSTAQEVEALNDKLGRMVDEVKEQKLKEIDAQQQASKAAYLR ARNIQLSSTEQNPAATKDDRGDE
Sequences:
>Translated_263_residues MSAKKFDKFKKWLPAISLAVVIHLILIAVVMNSQKQTVITADNSLVSTPTTNVEAALINDDELLNDTEVLTTLSDTTIIE KTTQSTDKAGDQAQNKQADQDTGSATQQSGASQGNSASNIDKASSNTNTDSTSPALQAKANKTSQMDNANTNTTATYSSA SSEPPYLEKNTSSASDQLLLSRDLPQAEAHGLAEEKGFKSTAQEVEALNDKLGRMVDEVKEQKLKEIDAQQQASKAAYLR ARNIQLSSTEQNPAATKDDRGDE >Mature_262_residues SAKKFDKFKKWLPAISLAVVIHLILIAVVMNSQKQTVITADNSLVSTPTTNVEAALINDDELLNDTEVLTTLSDTTIIEK TTQSTDKAGDQAQNKQADQDTGSATQQSGASQGNSASNIDKASSNTNTDSTSPALQAKANKTSQMDNANTNTTATYSSAS SEPPYLEKNTSSASDQLLLSRDLPQAEAHGLAEEKGFKSTAQEVEALNDKLGRMVDEVKEQKLKEIDAQQQASKAAYLRA RNIQLSSTEQNPAATKDDRGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28196; Mature: 28065
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKKFDKFKKWLPAISLAVVIHLILIAVVMNSQKQTVITADNSLVSTPTTNVEAALIND CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCEEEEECC DELLNDTEVLTTLSDTTIIEKTTQSTDKAGDQAQNKQADQDTGSATQQSGASQGNSASNI HHHHCHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHCCCCCCCCCCC DKASSNTNTDSTSPALQAKANKTSQMDNANTNTTATYSSASSEPPYLEKNTSSASDQLLL CCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH SRDLPQAEAHGLAEEKGFKSTAQEVEALNDKLGRMVDEVKEQKLKEIDAQQQASKAAYLR HCCCCHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARNIQLSSTEQNPAATKDDRGDE HCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SAKKFDKFKKWLPAISLAVVIHLILIAVVMNSQKQTVITADNSLVSTPTTNVEAALIND CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCEEEEECC DELLNDTEVLTTLSDTTIIEKTTQSTDKAGDQAQNKQADQDTGSATQQSGASQGNSASNI HHHHCHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHCCCCCCCCCCC DKASSNTNTDSTSPALQAKANKTSQMDNANTNTTATYSSASSEPPYLEKNTSSASDQLLL CCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH SRDLPQAEAHGLAEEKGFKSTAQEVEALNDKLGRMVDEVKEQKLKEIDAQQQASKAAYLR HCCCCHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARNIQLSSTEQNPAATKDDRGDE HCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA