Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148653544

Identifier: 148653544

GI number: 148653544

Start: 2160297

End: 2161415

Strand: Direct

Name: 148653544

Synonym: PsycPRwf_1747

Alternate gene names: NA

Gene position: 2160297-2161415 (Clockwise)

Preceding gene: 148653543

Following gene: 148653545

Centisome position: 72.52

GC content: 45.13

Gene sequence:

>1119_bases
ATGAGCATATTTTGGAGTTCATGGATTACCATCTTAAGTTTTGGCTGCTGGCTATTCATTCTTGGTGTGCTCCTTTTCGT
TCTGCGCAATAAGCCAGATCTTGCAGAAGACGGCACCACCGGTCACACTTATGATGATGTTATTCAAGAATACGACAAGC
CGCTACCTAAGTGGTGGCTGGTAATTTTCTTCGGTAGTATTGTTTGGGCACTAGCCTATTGGCTACTATTCCCAGCGATT
TTCCCAAGCCATTTCCACGGTTTATCAACCGTAGAAGTTGAGGGCAAAACTGTGCCTTGGAGCTCACATAACGAGCTTTA
TAGTGATTTAGAAGCCAACAATAAAATCTTTACCGACAACTTTAACACTAACTTTTTGCCTAACCCGACTGCCCAAAAGC
AATTAGCCAGCCTTGCGGCATTGCAAGTAAAAGCTCCAGTTAAGTCTGAGCGTCCCTCTGAGCTTAACGATCAGATTGAT
GCAGGTATTGTGGCTTTAGCGCCTTATGTTACTGAGCTTTCAGGCAACCAAAAAGCGTTAATGGCAGGTGAGCGTTTGTT
CTTACAGAACTGTGCAGTATGTCATGGTTCTACAGCGCAAGGTGCTCCTGGATATCCAAACTTAACAGATAATGATTGGT
TACATGGTGGCAAACCTGAAAACATCCTATTAACCCTACATAATGGTTGGCATGTTAACCTTGACCCTGCTCAGCCTCTA
CCTATGCCAGCTCAGCGTGCTGATCTTGGTGAACAAGGGGTTCGTGCTGCTGCTGAATATGTGTTATCAATCTCGAAAAA
CCAAGAAAAAGGTGAGCTTGATCCGGTTAAAGTGGCTCAAGGTAAAGCAATTTTTGATGAAAAATGTTTTATCTGTCACG
GTGCAGATGCTAAAGGTACCATCGCAGCTGGTGCTCCTAACCTAACCGACGGTATCTGGTTGTATGGCGGTGATCGCGAG
ACCATCCAAGAGACCATCCGTCACGGTCGTGGTGGTGTGATGCCTGAATGGGAAACTAAGCTAGGTAACGAGCGTATTAT
GCTATTGGCCGCTTATGTTTATTCACTGTCTCACAATAACGTGGTAGCCAACGCACCTGCAGCTGCTACTAGCAAATAG

Upstream 100 bases:

>100_bases
CACCTAATAACAAGAAGCGTTTTGAAGAAGATGCACAGCTTGCGTTGGATGATGAGCTGGTCAGCTCTTTAGCCGCTAAT
TCACGCAATAAGGATAAAAA

Downstream 100 bases:

>100_bases
CTGTCAATTTTATTAATTGTTAAATTGGTGTCAGAGACGAACACATAAAGGGGGCTGTTAATACAGCCCCCTTTATTGGT
TTATGCGCTTTAAAACTTAA

Product: class I cytochrome c

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit III; Cytochrome C Oxidase Subunit CcoP; Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome-C Oxidase FixP Chain; Cytochrome C Class I; Cytochrome-Cbb3 Oxidase Subunit III; Cytochrome C Oxidase Subunit; Cytochrome C Oxidase Subunit III; Cytochrome C; Cytochrome-C Oxidase Subunit III; Gluconate 2-Dehydrogenase; Cytochrome Cbb3 Oxidase Diheme Subunit Membrane-Bound CcoP; Cytochrome C Subfamily; Cbb3-Type Cytochrome C Oxidase Subunit CcoP; Cytochrome C Oxidase CcoP Subunit; Cytochrome C Oxidase; FixP2 Diheme C-Type Cytochrome; Class I Cytochrome C; Cytochrome C Mono- And Diheme Variants; Membrane-Anchored Cbb3 Cytochrome Oxidase Subunit; Cytochrome C Oxidase Transmembrane Protein; FixP Protein; Cytochrome Oxidase Component Cytochrome C Protein; Cytochrome C Oxidase Cbb3-Type Di-Heme Subunit III; Cytochrome C Oxidase Diheme Subunit Membrane-Bound; Cytochrome C Oxidase Protein FixP Chain; Cbb3 Oxidase Subunit III; Cytochrome C Oxidase FixP Chain Protein; Diheme Cytochrome C; FixP3 Cytochrome C Oxidase Membrane Anchored Subunit

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MSIFWSSWITILSFGCWLFILGVLLFVLRNKPDLAEDGTTGHTYDDVIQEYDKPLPKWWLVIFFGSIVWALAYWLLFPAI
FPSHFHGLSTVEVEGKTVPWSSHNELYSDLEANNKIFTDNFNTNFLPNPTAQKQLASLAALQVKAPVKSERPSELNDQID
AGIVALAPYVTELSGNQKALMAGERLFLQNCAVCHGSTAQGAPGYPNLTDNDWLHGGKPENILLTLHNGWHVNLDPAQPL
PMPAQRADLGEQGVRAAAEYVLSISKNQEKGELDPVKVAQGKAIFDEKCFICHGADAKGTIAAGAPNLTDGIWLYGGDRE
TIQETIRHGRGGVMPEWETKLGNERIMLLAAYVYSLSHNNVVANAPAAATSK

Sequences:

>Translated_372_residues
MSIFWSSWITILSFGCWLFILGVLLFVLRNKPDLAEDGTTGHTYDDVIQEYDKPLPKWWLVIFFGSIVWALAYWLLFPAI
FPSHFHGLSTVEVEGKTVPWSSHNELYSDLEANNKIFTDNFNTNFLPNPTAQKQLASLAALQVKAPVKSERPSELNDQID
AGIVALAPYVTELSGNQKALMAGERLFLQNCAVCHGSTAQGAPGYPNLTDNDWLHGGKPENILLTLHNGWHVNLDPAQPL
PMPAQRADLGEQGVRAAAEYVLSISKNQEKGELDPVKVAQGKAIFDEKCFICHGADAKGTIAAGAPNLTDGIWLYGGDRE
TIQETIRHGRGGVMPEWETKLGNERIMLLAAYVYSLSHNNVVANAPAAATSK
>Mature_371_residues
SIFWSSWITILSFGCWLFILGVLLFVLRNKPDLAEDGTTGHTYDDVIQEYDKPLPKWWLVIFFGSIVWALAYWLLFPAIF
PSHFHGLSTVEVEGKTVPWSSHNELYSDLEANNKIFTDNFNTNFLPNPTAQKQLASLAALQVKAPVKSERPSELNDQIDA
GIVALAPYVTELSGNQKALMAGERLFLQNCAVCHGSTAQGAPGYPNLTDNDWLHGGKPENILLTLHNGWHVNLDPAQPLP
MPAQRADLGEQGVRAAAEYVLSISKNQEKGELDPVKVAQGKAIFDEKCFICHGADAKGTIAAGAPNLTDGIWLYGGDRET
IQETIRHGRGGVMPEWETKLGNERIMLLAAYVYSLSHNNVVANAPAAATSK

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 40868; Mature: 40737

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFWSSWITILSFGCWLFILGVLLFVLRNKPDLAEDGTTGHTYDDVIQEYDKPLPKWWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHH
VIFFGSIVWALAYWLLFPAIFPSHFHGLSTVEVEGKTVPWSSHNELYSDLEANNKIFTDN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEECC
FNTNFLPNPTAQKQLASLAALQVKAPVKSERPSELNDQIDAGIVALAPYVTELSGNQKAL
CCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHH
MAGERLFLQNCAVCHGSTAQGAPGYPNLTDNDWLHGGKPENILLTLHNGWHVNLDPAQPL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCC
PMPAQRADLGEQGVRAAAEYVLSISKNQEKGELDPVKVAQGKAIFDEKCFICHGADAKGT
CCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEECCCEEEEECCCCCCE
IAAGAPNLTDGIWLYGGDRETIQETIRHGRGGVMPEWETKLGNERIMLLAAYVYSLSHNN
EECCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCC
VVANAPAAATSK
EEECCCCCCCCC
>Mature Secondary Structure 
SIFWSSWITILSFGCWLFILGVLLFVLRNKPDLAEDGTTGHTYDDVIQEYDKPLPKWWL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHH
VIFFGSIVWALAYWLLFPAIFPSHFHGLSTVEVEGKTVPWSSHNELYSDLEANNKIFTDN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEECC
FNTNFLPNPTAQKQLASLAALQVKAPVKSERPSELNDQIDAGIVALAPYVTELSGNQKAL
CCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHH
MAGERLFLQNCAVCHGSTAQGAPGYPNLTDNDWLHGGKPENILLTLHNGWHVNLDPAQPL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCC
PMPAQRADLGEQGVRAAAEYVLSISKNQEKGELDPVKVAQGKAIFDEKCFICHGADAKGT
CCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEECCCEEEEECCCCCCE
IAAGAPNLTDGIWLYGGDRETIQETIRHGRGGVMPEWETKLGNERIMLLAAYVYSLSHNN
EECCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCC
VVANAPAAATSK
EEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA