| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653544
Identifier: 148653544
GI number: 148653544
Start: 2160297
End: 2161415
Strand: Direct
Name: 148653544
Synonym: PsycPRwf_1747
Alternate gene names: NA
Gene position: 2160297-2161415 (Clockwise)
Preceding gene: 148653543
Following gene: 148653545
Centisome position: 72.52
GC content: 45.13
Gene sequence:
>1119_bases ATGAGCATATTTTGGAGTTCATGGATTACCATCTTAAGTTTTGGCTGCTGGCTATTCATTCTTGGTGTGCTCCTTTTCGT TCTGCGCAATAAGCCAGATCTTGCAGAAGACGGCACCACCGGTCACACTTATGATGATGTTATTCAAGAATACGACAAGC CGCTACCTAAGTGGTGGCTGGTAATTTTCTTCGGTAGTATTGTTTGGGCACTAGCCTATTGGCTACTATTCCCAGCGATT TTCCCAAGCCATTTCCACGGTTTATCAACCGTAGAAGTTGAGGGCAAAACTGTGCCTTGGAGCTCACATAACGAGCTTTA TAGTGATTTAGAAGCCAACAATAAAATCTTTACCGACAACTTTAACACTAACTTTTTGCCTAACCCGACTGCCCAAAAGC AATTAGCCAGCCTTGCGGCATTGCAAGTAAAAGCTCCAGTTAAGTCTGAGCGTCCCTCTGAGCTTAACGATCAGATTGAT GCAGGTATTGTGGCTTTAGCGCCTTATGTTACTGAGCTTTCAGGCAACCAAAAAGCGTTAATGGCAGGTGAGCGTTTGTT CTTACAGAACTGTGCAGTATGTCATGGTTCTACAGCGCAAGGTGCTCCTGGATATCCAAACTTAACAGATAATGATTGGT TACATGGTGGCAAACCTGAAAACATCCTATTAACCCTACATAATGGTTGGCATGTTAACCTTGACCCTGCTCAGCCTCTA CCTATGCCAGCTCAGCGTGCTGATCTTGGTGAACAAGGGGTTCGTGCTGCTGCTGAATATGTGTTATCAATCTCGAAAAA CCAAGAAAAAGGTGAGCTTGATCCGGTTAAAGTGGCTCAAGGTAAAGCAATTTTTGATGAAAAATGTTTTATCTGTCACG GTGCAGATGCTAAAGGTACCATCGCAGCTGGTGCTCCTAACCTAACCGACGGTATCTGGTTGTATGGCGGTGATCGCGAG ACCATCCAAGAGACCATCCGTCACGGTCGTGGTGGTGTGATGCCTGAATGGGAAACTAAGCTAGGTAACGAGCGTATTAT GCTATTGGCCGCTTATGTTTATTCACTGTCTCACAATAACGTGGTAGCCAACGCACCTGCAGCTGCTACTAGCAAATAG
Upstream 100 bases:
>100_bases CACCTAATAACAAGAAGCGTTTTGAAGAAGATGCACAGCTTGCGTTGGATGATGAGCTGGTCAGCTCTTTAGCCGCTAAT TCACGCAATAAGGATAAAAA
Downstream 100 bases:
>100_bases CTGTCAATTTTATTAATTGTTAAATTGGTGTCAGAGACGAACACATAAAGGGGGCTGTTAATACAGCCCCCTTTATTGGT TTATGCGCTTTAAAACTTAA
Product: class I cytochrome c
Products: ferricytochrome c; H2O
Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit III; Cytochrome C Oxidase Subunit CcoP; Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome-C Oxidase FixP Chain; Cytochrome C Class I; Cytochrome-Cbb3 Oxidase Subunit III; Cytochrome C Oxidase Subunit; Cytochrome C Oxidase Subunit III; Cytochrome C; Cytochrome-C Oxidase Subunit III; Gluconate 2-Dehydrogenase; Cytochrome Cbb3 Oxidase Diheme Subunit Membrane-Bound CcoP; Cytochrome C Subfamily; Cbb3-Type Cytochrome C Oxidase Subunit CcoP; Cytochrome C Oxidase CcoP Subunit; Cytochrome C Oxidase; FixP2 Diheme C-Type Cytochrome; Class I Cytochrome C; Cytochrome C Mono- And Diheme Variants; Membrane-Anchored Cbb3 Cytochrome Oxidase Subunit; Cytochrome C Oxidase Transmembrane Protein; FixP Protein; Cytochrome Oxidase Component Cytochrome C Protein; Cytochrome C Oxidase Cbb3-Type Di-Heme Subunit III; Cytochrome C Oxidase Diheme Subunit Membrane-Bound; Cytochrome C Oxidase Protein FixP Chain; Cbb3 Oxidase Subunit III; Cytochrome C Oxidase FixP Chain Protein; Diheme Cytochrome C; FixP3 Cytochrome C Oxidase Membrane Anchored Subunit
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSIFWSSWITILSFGCWLFILGVLLFVLRNKPDLAEDGTTGHTYDDVIQEYDKPLPKWWLVIFFGSIVWALAYWLLFPAI FPSHFHGLSTVEVEGKTVPWSSHNELYSDLEANNKIFTDNFNTNFLPNPTAQKQLASLAALQVKAPVKSERPSELNDQID AGIVALAPYVTELSGNQKALMAGERLFLQNCAVCHGSTAQGAPGYPNLTDNDWLHGGKPENILLTLHNGWHVNLDPAQPL PMPAQRADLGEQGVRAAAEYVLSISKNQEKGELDPVKVAQGKAIFDEKCFICHGADAKGTIAAGAPNLTDGIWLYGGDRE TIQETIRHGRGGVMPEWETKLGNERIMLLAAYVYSLSHNNVVANAPAAATSK
Sequences:
>Translated_372_residues MSIFWSSWITILSFGCWLFILGVLLFVLRNKPDLAEDGTTGHTYDDVIQEYDKPLPKWWLVIFFGSIVWALAYWLLFPAI FPSHFHGLSTVEVEGKTVPWSSHNELYSDLEANNKIFTDNFNTNFLPNPTAQKQLASLAALQVKAPVKSERPSELNDQID AGIVALAPYVTELSGNQKALMAGERLFLQNCAVCHGSTAQGAPGYPNLTDNDWLHGGKPENILLTLHNGWHVNLDPAQPL PMPAQRADLGEQGVRAAAEYVLSISKNQEKGELDPVKVAQGKAIFDEKCFICHGADAKGTIAAGAPNLTDGIWLYGGDRE TIQETIRHGRGGVMPEWETKLGNERIMLLAAYVYSLSHNNVVANAPAAATSK >Mature_371_residues SIFWSSWITILSFGCWLFILGVLLFVLRNKPDLAEDGTTGHTYDDVIQEYDKPLPKWWLVIFFGSIVWALAYWLLFPAIF PSHFHGLSTVEVEGKTVPWSSHNELYSDLEANNKIFTDNFNTNFLPNPTAQKQLASLAALQVKAPVKSERPSELNDQIDA GIVALAPYVTELSGNQKALMAGERLFLQNCAVCHGSTAQGAPGYPNLTDNDWLHGGKPENILLTLHNGWHVNLDPAQPLP MPAQRADLGEQGVRAAAEYVLSISKNQEKGELDPVKVAQGKAIFDEKCFICHGADAKGTIAAGAPNLTDGIWLYGGDRET IQETIRHGRGGVMPEWETKLGNERIMLLAAYVYSLSHNNVVANAPAAATSK
Specific function: Unknown
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 40868; Mature: 40737
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFWSSWITILSFGCWLFILGVLLFVLRNKPDLAEDGTTGHTYDDVIQEYDKPLPKWWL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHH VIFFGSIVWALAYWLLFPAIFPSHFHGLSTVEVEGKTVPWSSHNELYSDLEANNKIFTDN HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEECC FNTNFLPNPTAQKQLASLAALQVKAPVKSERPSELNDQIDAGIVALAPYVTELSGNQKAL CCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHH MAGERLFLQNCAVCHGSTAQGAPGYPNLTDNDWLHGGKPENILLTLHNGWHVNLDPAQPL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCC PMPAQRADLGEQGVRAAAEYVLSISKNQEKGELDPVKVAQGKAIFDEKCFICHGADAKGT CCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEECCCEEEEECCCCCCE IAAGAPNLTDGIWLYGGDRETIQETIRHGRGGVMPEWETKLGNERIMLLAAYVYSLSHNN EECCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCC VVANAPAAATSK EEECCCCCCCCC >Mature Secondary Structure SIFWSSWITILSFGCWLFILGVLLFVLRNKPDLAEDGTTGHTYDDVIQEYDKPLPKWWL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHH VIFFGSIVWALAYWLLFPAIFPSHFHGLSTVEVEGKTVPWSSHNELYSDLEANNKIFTDN HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEECC FNTNFLPNPTAQKQLASLAALQVKAPVKSERPSELNDQIDAGIVALAPYVTELSGNQKAL CCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHH MAGERLFLQNCAVCHGSTAQGAPGYPNLTDNDWLHGGKPENILLTLHNGWHVNLDPAQPL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCC PMPAQRADLGEQGVRAAAEYVLSISKNQEKGELDPVKVAQGKAIFDEKCFICHGADAKGT CCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEECCCEEEEECCCCCCE IAAGAPNLTDGIWLYGGDRETIQETIRHGRGGVMPEWETKLGNERIMLLAAYVYSLSHNN EECCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCC VVANAPAAATSK EEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA