| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653482
Identifier: 148653482
GI number: 148653482
Start: 2083598
End: 2084401
Strand: Direct
Name: 148653482
Synonym: PsycPRwf_1685
Alternate gene names: NA
Gene position: 2083598-2084401 (Clockwise)
Preceding gene: 148653481
Following gene: 148653504
Centisome position: 69.94
GC content: 42.41
Gene sequence:
>804_bases ATGCCCACACAAAGAGGATTTTACGTGCAACATACTCAGCAACCTATTAGTGATACGACCGATGAGCTTTATTCAGATTA TGATGAGAGTTTAAAGTTTAGTATCTCCGATATGTGGTCATCCTTTACTGGCAAAGTGAAGGCTGTGTATGGCAAAGCGG CAAACTCTGTCGATGATGAGTTCTCCTTGCCGGTTAGCCAAGATCAGGTCAATGCGGCACTAAAAAAGTTCGTCACCGAT AATGTGAGTCAAATTCTTGAGCTACGGGTGGAGCTGCATGATGATTGGTTTCGTCTGTTTTGTACCATTGATGTGGCTGG TGTGTATGCGGAGATTGCCAGTAACTTTGGCTTAGTACATGTTCAAATCGACCGCGATGTGCAGCGCTTTGTGTTCGCCC AGCAGACCAATACCGATGTGATCAAGTTAAACTGCGAGTCATTTTTAAAGCGTACAGGCATTAAGTTTGTGATTTGGTTT TATCACAGTGTGCTAAAAAAAGACCCACTTGGCTTTATTTTAAGTAAGATTAATATTGCTCGCCCAAAAGATAATATCAT CTACCTAGATATTAACCGCTGGCTAAAACGCAATAAAAAAATCATCAGCACCTTGCACAAGGTTCAAGTCAATTACGGTC TGGTAGAAGAAGAACAGTTAGTACTAAAAACCAAAGTTAACGTTCGCGACTTATTGTCTAACACCAGCTCTGAGGACATT ATCACCCCAGATGATGAGCCTGAGCTGCTCAAAGGCCCCACCAACCCTATCAGTGATGCCATTAGCCCAAGTCAAGAACA GTAA
Upstream 100 bases:
>100_bases TTTTAACTTCACCACCACCGTCGGGGTGATGTACGAGTTTTAATAGTCAATCTTGACAGCAGGTTTAACGCTCAGCGTTT AGTAGATTTTCGCTTACCCC
Downstream 100 bases:
>100_bases GCTTAACCCTTGCATTACTGTGGCTGTGATAGTGCCAGATACGCCATAAAGACAAAACAAAGCCCCTAATTAAGGGGCTT TGCTGATTAAGGTGAGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPTQRGFYVQHTQQPISDTTDELYSDYDESLKFSISDMWSSFTGKVKAVYGKAANSVDDEFSLPVSQDQVNAALKKFVTD NVSQILELRVELHDDWFRLFCTIDVAGVYAEIASNFGLVHVQIDRDVQRFVFAQQTNTDVIKLNCESFLKRTGIKFVIWF YHSVLKKDPLGFILSKINIARPKDNIIYLDINRWLKRNKKIISTLHKVQVNYGLVEEEQLVLKTKVNVRDLLSNTSSEDI ITPDDEPELLKGPTNPISDAISPSQEQ
Sequences:
>Translated_267_residues MPTQRGFYVQHTQQPISDTTDELYSDYDESLKFSISDMWSSFTGKVKAVYGKAANSVDDEFSLPVSQDQVNAALKKFVTD NVSQILELRVELHDDWFRLFCTIDVAGVYAEIASNFGLVHVQIDRDVQRFVFAQQTNTDVIKLNCESFLKRTGIKFVIWF YHSVLKKDPLGFILSKINIARPKDNIIYLDINRWLKRNKKIISTLHKVQVNYGLVEEEQLVLKTKVNVRDLLSNTSSEDI ITPDDEPELLKGPTNPISDAISPSQEQ >Mature_266_residues PTQRGFYVQHTQQPISDTTDELYSDYDESLKFSISDMWSSFTGKVKAVYGKAANSVDDEFSLPVSQDQVNAALKKFVTDN VSQILELRVELHDDWFRLFCTIDVAGVYAEIASNFGLVHVQIDRDVQRFVFAQQTNTDVIKLNCESFLKRTGIKFVIWFY HSVLKKDPLGFILSKINIARPKDNIIYLDINRWLKRNKKIISTLHKVQVNYGLVEEEQLVLKTKVNVRDLLSNTSSEDII TPDDEPELLKGPTNPISDAISPSQEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30553; Mature: 30422
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTQRGFYVQHTQQPISDTTDELYSDYDESLKFSISDMWSSFTGKVKAVYGKAANSVDDE CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHCCCEEEEECCCCCCCCCC FSLPVSQDQVNAALKKFVTDNVSQILELRVELHDDWFRLFCTIDVAGVYAEIASNFGLVH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEE VQIDRDVQRFVFAQQTNTDVIKLNCESFLKRTGIKFVIWFYHSVLKKDPLGFILSKINIA EEECCHHHHHHHHCCCCCCEEEECHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCC RPKDNIIYLDINRWLKRNKKIISTLHKVQVNYGLVEEEQLVLKTKVNVRDLLSNTSSEDI CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCCCCCC ITPDDEPELLKGPTNPISDAISPSQEQ CCCCCCCHHHCCCCCCHHHCCCCCCCC >Mature Secondary Structure PTQRGFYVQHTQQPISDTTDELYSDYDESLKFSISDMWSSFTGKVKAVYGKAANSVDDE CCCCCEEEECCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHCCCEEEEECCCCCCCCCC FSLPVSQDQVNAALKKFVTDNVSQILELRVELHDDWFRLFCTIDVAGVYAEIASNFGLVH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEE VQIDRDVQRFVFAQQTNTDVIKLNCESFLKRTGIKFVIWFYHSVLKKDPLGFILSKINIA EEECCHHHHHHHHCCCCCCEEEECHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCC RPKDNIIYLDINRWLKRNKKIISTLHKVQVNYGLVEEEQLVLKTKVNVRDLLSNTSSEDI CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCCCCCC ITPDDEPELLKGPTNPISDAISPSQEQ CCCCCCCHHHCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA