| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653283
Identifier: 148653283
GI number: 148653283
Start: 1810770
End: 1812509
Strand: Direct
Name: 148653283
Synonym: PsycPRwf_1482
Alternate gene names: NA
Gene position: 1810770-1812509 (Clockwise)
Preceding gene: 148653282
Following gene: 148653285
Centisome position: 60.78
GC content: 46.44
Gene sequence:
>1740_bases ATGACTGCTGCCAATTTATCCGACTTATCAAAAGACCCCATTTACGCCGAGCTTCTGGTGAAAATCCACCTGCTTGAACA GCGTAATGAGCACCTGCAGCAACAAATTGATCAAACAAATACAAGTCACGATCAACTACAGCAGCTTTTTAACCAAGTGG TTGAGGAAAACCACAAGCTGTATGAACAAGTGCTTGAACTCATCGAAAAGCAAAAGCAGCTTATTCACCGGCTCTATGGA CAAAAAAGCGAAGGCGTCACTGCCAGACAAACCCACTTAAACTATGAGGCGGCGCAAGAAGACTTAGCAGAGCTTGAACA AATCCGAGATGACTACCGGAGTGGCTTAAGCAAAGAGGAGCTTGCCAAGCTGCCTGCTATCGATCGTACTCAGGCAGAAA CCCTCATTGATGAGGATGAGCTTGCTGACCAGCCGCCACCCTCAGTCACTCATCAGTCTAAAAAACCAAAGCGTGCCAAA TACACGGTTATTCCAGACAACCTTGAGGTCAAAACCTTGGTTCATGAACCACTCACCACCGTTTGTGACTGCGGCTGTCA AATGATGCGAATTGGGGAGGATAAACAAGACAAACTTGGCATTATCCCTAAGCAGTTTTATATTGAGCGTCACCTCTATC CTAAATGGGTATGCCGTGAGTGTGACATCCTTCATCAAGCGGCTGCCCCCAAGCAGATTATTAACAAAAGCATTGCCACC CCAGAGCTGCTTGCGCACATCCTTATTAGCAAGTATGCAGACCATCAGCCCCTATATCGGCAGAATATTATCTATCAGCG AAGTGGGGTAAATATCCCCGATGCCACCATGGCAGATTGGGTGGGACGCTGCGGCGTTGCCCTTGAGCCTTTAGTCAGTC GCTTGCACGCGCTATTACTGTCTGAACCCATCTTACATGCTGATGAAACGCCAGTATCTATCATGAAGAATCATGTAAAG GTAGGTGGTAAATCATTAAAAAAAGGCTATGTCTGGGCGTATCTTACGCCACAGCACAGCTCCTTAAAGGCGGTGGTATA TGACTTTGCCGAAAGCCGTCGTAATGAGCACCCTAAAGCCTTTTTAGATAAGTGGCGCGGTAAGCTGGTTTGCGATGATT ACAGCGGGTATAAGTTCTTATTTCATCAAGGTGTGACTGAAATCGGTTGTCTGGCCCATGCACGGCGTAAATTTCATGAA CTGCATATCACTGGGCAAAGTATCGTGAGCATTGAGGCATTAACGTTATTTAGGCAGTTGTATGCCATTGAACGTGAGAT TGATGAGCGATTTGAAAAACACACACCCCCAATACCAAGAGATCCCCAAATAGTTCGGCAAATCAGGCAAGAAAAAGCCA AACCAATTGCCGATAAGCTGCACCAATGGCTACAAGAAAAAAGACAGTTAACCACTAAAAATGCCAGTATTAGTAAGGCG ATGGATTATTGCCTAAAACGTTGGCAGGCGCTGACTCAGTATCTAGATGATGGCAGGCTGCCGATTGATAATAATTGGGC GGAGAATCAGATGCGTCCGTGGGCACTTGGGCGTAAAAACTGGTTGTTTGCTGGTTCGCTACGAAGTGGGCAGCGTGCTG CGAATATTATGTCAATCATTCAGTCAGCTCGCTTAAATGGCTTGGATGTGTCTGCTTATTTGACAGATGTGCTAAGACGC TTGCCTACTCAAGAGGATCTGGATGAGTTGTTACCTCATCGCTGGGTGCCACCGCAATAG
Upstream 100 bases:
>100_bases AATCAGTGGACTGCCTTGGCGTAACATGGGTAAGGATAAATTAACCCCCATTCTATAAATATCAGATGACAGGCAAATAA AACTCTGGCAACATATCGCC
Downstream 100 bases:
>100_bases GGGGTTGGTCGGATGCTTACTTACAAAGCTTACCTGACAGCCTCACTAATTTAAAACAGTTAGAGCGTCTAGATATTAGT GACAATCCATTATCTCACTT
Product: transposase IS66
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MTAANLSDLSKDPIYAELLVKIHLLEQRNEHLQQQIDQTNTSHDQLQQLFNQVVEENHKLYEQVLELIEKQKQLIHRLYG QKSEGVTARQTHLNYEAAQEDLAELEQIRDDYRSGLSKEELAKLPAIDRTQAETLIDEDELADQPPPSVTHQSKKPKRAK YTVIPDNLEVKTLVHEPLTTVCDCGCQMMRIGEDKQDKLGIIPKQFYIERHLYPKWVCRECDILHQAAAPKQIINKSIAT PELLAHILISKYADHQPLYRQNIIYQRSGVNIPDATMADWVGRCGVALEPLVSRLHALLLSEPILHADETPVSIMKNHVK VGGKSLKKGYVWAYLTPQHSSLKAVVYDFAESRRNEHPKAFLDKWRGKLVCDDYSGYKFLFHQGVTEIGCLAHARRKFHE LHITGQSIVSIEALTLFRQLYAIEREIDERFEKHTPPIPRDPQIVRQIRQEKAKPIADKLHQWLQEKRQLTTKNASISKA MDYCLKRWQALTQYLDDGRLPIDNNWAENQMRPWALGRKNWLFAGSLRSGQRAANIMSIIQSARLNGLDVSAYLTDVLRR LPTQEDLDELLPHRWVPPQ
Sequences:
>Translated_579_residues MTAANLSDLSKDPIYAELLVKIHLLEQRNEHLQQQIDQTNTSHDQLQQLFNQVVEENHKLYEQVLELIEKQKQLIHRLYG QKSEGVTARQTHLNYEAAQEDLAELEQIRDDYRSGLSKEELAKLPAIDRTQAETLIDEDELADQPPPSVTHQSKKPKRAK YTVIPDNLEVKTLVHEPLTTVCDCGCQMMRIGEDKQDKLGIIPKQFYIERHLYPKWVCRECDILHQAAAPKQIINKSIAT PELLAHILISKYADHQPLYRQNIIYQRSGVNIPDATMADWVGRCGVALEPLVSRLHALLLSEPILHADETPVSIMKNHVK VGGKSLKKGYVWAYLTPQHSSLKAVVYDFAESRRNEHPKAFLDKWRGKLVCDDYSGYKFLFHQGVTEIGCLAHARRKFHE LHITGQSIVSIEALTLFRQLYAIEREIDERFEKHTPPIPRDPQIVRQIRQEKAKPIADKLHQWLQEKRQLTTKNASISKA MDYCLKRWQALTQYLDDGRLPIDNNWAENQMRPWALGRKNWLFAGSLRSGQRAANIMSIIQSARLNGLDVSAYLTDVLRR LPTQEDLDELLPHRWVPPQ >Mature_578_residues TAANLSDLSKDPIYAELLVKIHLLEQRNEHLQQQIDQTNTSHDQLQQLFNQVVEENHKLYEQVLELIEKQKQLIHRLYGQ KSEGVTARQTHLNYEAAQEDLAELEQIRDDYRSGLSKEELAKLPAIDRTQAETLIDEDELADQPPPSVTHQSKKPKRAKY TVIPDNLEVKTLVHEPLTTVCDCGCQMMRIGEDKQDKLGIIPKQFYIERHLYPKWVCRECDILHQAAAPKQIINKSIATP ELLAHILISKYADHQPLYRQNIIYQRSGVNIPDATMADWVGRCGVALEPLVSRLHALLLSEPILHADETPVSIMKNHVKV GGKSLKKGYVWAYLTPQHSSLKAVVYDFAESRRNEHPKAFLDKWRGKLVCDDYSGYKFLFHQGVTEIGCLAHARRKFHEL HITGQSIVSIEALTLFRQLYAIEREIDERFEKHTPPIPRDPQIVRQIRQEKAKPIADKLHQWLQEKRQLTTKNASISKAM DYCLKRWQALTQYLDDGRLPIDNNWAENQMRPWALGRKNWLFAGSLRSGQRAANIMSIIQSARLNGLDVSAYLTDVLRRL PTQEDLDELLPHRWVPPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 66837; Mature: 66706
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAANLSDLSKDPIYAELLVKIHLLEQRNEHLQQQIDQTNTSHDQLQQLFNQVVEENHKL CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YEQVLELIEKQKQLIHRLYGQKSEGVTARQTHLNYEAAQEDLAELEQIRDDYRSGLSKEE HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHH LAKLPAIDRTQAETLIDEDELADQPPPSVTHQSKKPKRAKYTVIPDNLEVKTLVHEPLTT HHHCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH VCDCGCQMMRIGEDKQDKLGIIPKQFYIERHLYPKWVCRECDILHQAAAPKQIINKSIAT HHHCCHHHHHCCCCCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCC PELLAHILISKYADHQPLYRQNIIYQRSGVNIPDATMADWVGRCGVALEPLVSRLHALLL HHHHHHHHHHHHCCCCCHHHHHCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH SEPILHADETPVSIMKNHVKVGGKSLKKGYVWAYLTPQHSSLKAVVYDFAESRRNEHPKA HCCCCCCCCCCHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHH FLDKWRGKLVCDDYSGYKFLFHQGVTEIGCLAHARRKFHELHITGQSIVSIEALTLFRQL HHHHHCCCEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH YAIEREIDERFEKHTPPIPRDPQIVRQIRQEKAKPIADKLHQWLQEKRQLTTKNASISKA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH MDYCLKRWQALTQYLDDGRLPIDNNWAENQMRPWALGRKNWLFAGSLRSGQRAANIMSII HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH QSARLNGLDVSAYLTDVLRRLPTQEDLDELLPHRWVPPQ HHHCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure TAANLSDLSKDPIYAELLVKIHLLEQRNEHLQQQIDQTNTSHDQLQQLFNQVVEENHKL CCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YEQVLELIEKQKQLIHRLYGQKSEGVTARQTHLNYEAAQEDLAELEQIRDDYRSGLSKEE HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHH LAKLPAIDRTQAETLIDEDELADQPPPSVTHQSKKPKRAKYTVIPDNLEVKTLVHEPLTT HHHCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH VCDCGCQMMRIGEDKQDKLGIIPKQFYIERHLYPKWVCRECDILHQAAAPKQIINKSIAT HHHCCHHHHHCCCCCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCC PELLAHILISKYADHQPLYRQNIIYQRSGVNIPDATMADWVGRCGVALEPLVSRLHALLL HHHHHHHHHHHHCCCCCHHHHHCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH SEPILHADETPVSIMKNHVKVGGKSLKKGYVWAYLTPQHSSLKAVVYDFAESRRNEHPKA HCCCCCCCCCCHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHH FLDKWRGKLVCDDYSGYKFLFHQGVTEIGCLAHARRKFHELHITGQSIVSIEALTLFRQL HHHHHCCCEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH YAIEREIDERFEKHTPPIPRDPQIVRQIRQEKAKPIADKLHQWLQEKRQLTTKNASISKA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH MDYCLKRWQALTQYLDDGRLPIDNNWAENQMRPWALGRKNWLFAGSLRSGQRAANIMSII HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH QSARLNGLDVSAYLTDVLRRLPTQEDLDELLPHRWVPPQ HHHCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]