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The map label for this gene is ymfK [C]

Identifier: 148653141

GI number: 148653141

Start: 1635760

End: 1636419

Strand: Direct

Name: ymfK [C]

Synonym: PsycPRwf_1339

Alternate gene names: 148653141

Gene position: 1635760-1636419 (Clockwise)

Preceding gene: 148653126

Following gene: 148653142

Centisome position: 54.91

GC content: 43.79

Gene sequence:

>660_bases
ATGAAGCTAGATACATTTAGAGACAGGTTGATATACGCCAAAGATGAAAAGGGACTGAAGCAAGTTGATCTTGTTAAAGC
GACGGGAGTTAGTAAGGGCACAGTCTCAAACTGGATAAGCGGCAAAACTACCCCAGACGATACTGTAGCCCTGGGGGATT
TGGCAAAAGCGCTTGGAGTGTCAGTAGATTGGTTAGTTACAGGACGGGAGTCTAATAACCATTCTTTTAGCAATGTAAGG
CCTGTAGATAAACATGAAATCAGAATGGCTCCTGTGCTTAACTATGTCCAAGCCGGTGAGTTTTGTGAGTATTTTGACGA
CGCGATTGCTGATAGGTTTGAGCCTGTAAGCACAAAACACCCCAAAAATTCTTATTGGGTTGAGCTCAACGGGCTTAGCA
TGATTCCGGACTTTTATCCCGAGGAATTAGTTCTTATTAATCCCGATATGCAACCCTCACCTGGTGATTATGTCGTTGCT
AAAAAGGCAGGTGAAAATGCCGTAACGTTTAAAAAGTGGCGGCCACGTGGGTTTGATGATGACGGCGTTGAGTATTGTGA
GCTGGTACCTCTAAACCCCGACTTCCCTATCATTGATAGTAGGCATACTCCGTTCACAATTTGTGGCGTGGCTGTTGAAC
ATAAGAAGAAATTAAAATGA

Upstream 100 bases:

>100_bases
ACTTCCTTAAACCATTAGTTTAATACATTAAACCATAAGTTTAAGCGCTTATCAACTGACAGTGGTAAATTATGTTTAAT
AAATTAAACAAGGTTGAGTT

Downstream 100 bases:

>100_bases
TTAGACTATTTGCATCATCTATCGCATTAATATCTTTGGCTGGATGCAGCGACGACCCCAATAGCAAACCAGAATACGGC
GATGAATCGGGATTGCCAAA

Product: putative prophage repressor

Products: NA

Alternate protein names: Prophage Repressor; Repressor; LexA Family Repressor/S24 Family Protease; Peptidase; Prophage Repressor CI; XRE Family Transcriptional Regulator; Cro/Cl Family Transcriptional Regulator; Repressor ; Repressor Domain-Containing Protein; Helix-Turn-Helix Family; Repressor V; Transcriptional Regulator XRE Family; LexA Repressor; S24 Family Peptidase

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKLDTFRDRLIYAKDEKGLKQVDLVKATGVSKGTVSNWISGKTTPDDTVALGDLAKALGVSVDWLVTGRESNNHSFSNVR
PVDKHEIRMAPVLNYVQAGEFCEYFDDAIADRFEPVSTKHPKNSYWVELNGLSMIPDFYPEELVLINPDMQPSPGDYVVA
KKAGENAVTFKKWRPRGFDDDGVEYCELVPLNPDFPIIDSRHTPFTICGVAVEHKKKLK

Sequences:

>Translated_219_residues
MKLDTFRDRLIYAKDEKGLKQVDLVKATGVSKGTVSNWISGKTTPDDTVALGDLAKALGVSVDWLVTGRESNNHSFSNVR
PVDKHEIRMAPVLNYVQAGEFCEYFDDAIADRFEPVSTKHPKNSYWVELNGLSMIPDFYPEELVLINPDMQPSPGDYVVA
KKAGENAVTFKKWRPRGFDDDGVEYCELVPLNPDFPIIDSRHTPFTICGVAVEHKKKLK
>Mature_219_residues
MKLDTFRDRLIYAKDEKGLKQVDLVKATGVSKGTVSNWISGKTTPDDTVALGDLAKALGVSVDWLVTGRESNNHSFSNVR
PVDKHEIRMAPVLNYVQAGEFCEYFDDAIADRFEPVSTKHPKNSYWVELNGLSMIPDFYPEELVLINPDMQPSPGDYVVA
KKAGENAVTFKKWRPRGFDDDGVEYCELVPLNPDFPIIDSRHTPFTICGVAVEHKKKLK

Specific function: Unknown

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24590; Mature: 24590

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDTFRDRLIYAKDEKGLKQVDLVKATGVSKGTVSNWISGKTTPDDTVALGDLAKALGV
CCCCCCCCCEEEECCCCCCHHEEEEHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCC
SVDWLVTGRESNNHSFSNVRPVDKHEIRMAPVLNYVQAGEFCEYFDDAIADRFEPVSTKH
EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PKNSYWVELNGLSMIPDFYPEELVLINPDMQPSPGDYVVAKKAGENAVTFKKWRPRGFDD
CCCCEEEEECCCEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCC
DGVEYCELVPLNPDFPIIDSRHTPFTICGVAVEHKKKLK
CCCCEEEEEECCCCCCEECCCCCCEEEEEEEEHHHHCCC
>Mature Secondary Structure
MKLDTFRDRLIYAKDEKGLKQVDLVKATGVSKGTVSNWISGKTTPDDTVALGDLAKALGV
CCCCCCCCCEEEECCCCCCHHEEEEHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCC
SVDWLVTGRESNNHSFSNVRPVDKHEIRMAPVLNYVQAGEFCEYFDDAIADRFEPVSTKH
EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PKNSYWVELNGLSMIPDFYPEELVLINPDMQPSPGDYVVAKKAGENAVTFKKWRPRGFDD
CCCCEEEEECCCEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCC
DGVEYCELVPLNPDFPIIDSRHTPFTICGVAVEHKKKLK
CCCCEEEEEECCCCCCEECCCCCCEEEEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA