| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653120
Identifier: 148653120
GI number: 148653120
Start: 1614355
End: 1615122
Strand: Direct
Name: 148653120
Synonym: PsycPRwf_1318
Alternate gene names: NA
Gene position: 1614355-1615122 (Clockwise)
Preceding gene: 148653118
Following gene: 148653126
Centisome position: 54.19
GC content: 34.64
Gene sequence:
>768_bases ATGGAACTAAAATCAATAAAAGACCAACTTTATTACTCCACTGTGATGATCGAAACAGCTCAAGGAGCAGGAACGGCTTT CTTACTATCCAAAACAATAGTTGGGCTTACTAGAGTCTATTTAGTAACTAACAAACATGTGGTTAAAGATAAAACAGACT GTGTGGTTAGATTCCATAGATCAGAATCCTTGGATCCGAAAACCAAAGTAGGTGACTTTGTTTATCACTTCACGAATGAA GACTGGGTTAATGGCTGGAAGTTTCATGATGATAATGAAGTTGATTTAGCAGTATTTAATTTAACAGAAACAATAGCTGC TCTTTATCAGCAAGAGCACTATATATTCTATCGTTGTCTAACAACGGATATGATTACTAGTAGGGAAAAAGAAAAAGATA TTGTTGTAATGGAAAGGATATTTTTCGTAGGTTATCCTAATGCTATTAGGGATGAAGTTAATAATTTACCTATAGCGAGA AGTGGCTATTTAGCTACACCTTTATATTCGAATTTCGATGGAAAAGAAGCGTTTTTGTTCGATGCTAGTGTCTTTGAAGG GTCGAGTGGTAGTCCGGTATGTATTGTGAATGAAAATTTTGAAACTTATTCCGATGCAAGGGGAAATGCTAAAATCGAAG GGCGCTGTATCTTAGCTGGAGTAAACTCTAGTACATATACTAGAGTAAGCGATAAACAATACTTAAATATTGGATACGCA TGGAAAGCTTATAAAATTTTAGAAATTCTTGAACAGAACGAAATATAG
Upstream 100 bases:
>100_bases TACACTCAAAATCGGGATATTTTGGTCAGACAATTAGCAGATTTTTTAAGTATAATTAAAGTTAAACAGCGGCTCAAATT TACTTAAGAGTATTAAAAAC
Downstream 100 bases:
>100_bases TTTAATCTACACTATGAATTAAGGAGACCATCCGAGACCATCCCGAATTCTGGTCACTATCTAGTTTTCTAGCAATCTTC TAAGCTCAAATTTTGCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MELKSIKDQLYYSTVMIETAQGAGTAFLLSKTIVGLTRVYLVTNKHVVKDKTDCVVRFHRSESLDPKTKVGDFVYHFTNE DWVNGWKFHDDNEVDLAVFNLTETIAALYQQEHYIFYRCLTTDMITSREKEKDIVVMERIFFVGYPNAIRDEVNNLPIAR SGYLATPLYSNFDGKEAFLFDASVFEGSSGSPVCIVNENFETYSDARGNAKIEGRCILAGVNSSTYTRVSDKQYLNIGYA WKAYKILEILEQNEI
Sequences:
>Translated_255_residues MELKSIKDQLYYSTVMIETAQGAGTAFLLSKTIVGLTRVYLVTNKHVVKDKTDCVVRFHRSESLDPKTKVGDFVYHFTNE DWVNGWKFHDDNEVDLAVFNLTETIAALYQQEHYIFYRCLTTDMITSREKEKDIVVMERIFFVGYPNAIRDEVNNLPIAR SGYLATPLYSNFDGKEAFLFDASVFEGSSGSPVCIVNENFETYSDARGNAKIEGRCILAGVNSSTYTRVSDKQYLNIGYA WKAYKILEILEQNEI >Mature_255_residues MELKSIKDQLYYSTVMIETAQGAGTAFLLSKTIVGLTRVYLVTNKHVVKDKTDCVVRFHRSESLDPKTKVGDFVYHFTNE DWVNGWKFHDDNEVDLAVFNLTETIAALYQQEHYIFYRCLTTDMITSREKEKDIVVMERIFFVGYPNAIRDEVNNLPIAR SGYLATPLYSNFDGKEAFLFDASVFEGSSGSPVCIVNENFETYSDARGNAKIEGRCILAGVNSSTYTRVSDKQYLNIGYA WKAYKILEILEQNEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29141; Mature: 29141
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKSIKDQLYYSTVMIETAQGAGTAFLLSKTIVGLTRVYLVTNKHVVKDKTDCVVRFHR CCHHHHHHHHEEEEEEEEECCCCCEEHHHHHHHHHHEEEEEEECCEEECCCCCEEEEEEC SESLDPKTKVGDFVYHFTNEDWVNGWKFHDDNEVDLAVFNLTETIAALYQQEHYIFYRCL CCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCEEEEEEEHHHHHHHHHHCCCEEEEEEE TTDMITSREKEKDIVVMERIFFVGYPNAIRDEVNNLPIARSGYLATPLYSNFDGKEAFLF HHHHHHCCCCCCCCEEEEEEHEECCCHHHHHHHHCCCEECCCCEECCCCCCCCCCEEEEE DASVFEGSSGSPVCIVNENFETYSDARGNAKIEGRCILAGVNSSTYTRVSDKQYLNIGYA EEEEECCCCCCCEEEECCCCCCCCCCCCCCEECCEEEEEECCCCCEEEECCCEEEEECCC WKAYKILEILEQNEI HHHHHHHHHHHHCCC >Mature Secondary Structure MELKSIKDQLYYSTVMIETAQGAGTAFLLSKTIVGLTRVYLVTNKHVVKDKTDCVVRFHR CCHHHHHHHHEEEEEEEEECCCCCEEHHHHHHHHHHEEEEEEECCEEECCCCCEEEEEEC SESLDPKTKVGDFVYHFTNEDWVNGWKFHDDNEVDLAVFNLTETIAALYQQEHYIFYRCL CCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCEEEEEEEHHHHHHHHHHCCCEEEEEEE TTDMITSREKEKDIVVMERIFFVGYPNAIRDEVNNLPIARSGYLATPLYSNFDGKEAFLF HHHHHHCCCCCCCCEEEEEEHEECCCHHHHHHHHCCCEECCCCEECCCCCCCCCCEEEEE DASVFEGSSGSPVCIVNENFETYSDARGNAKIEGRCILAGVNSSTYTRVSDKQYLNIGYA EEEEECCCCCCCEEEECCCCCCCCCCCCCCEECCEEEEEECCCCCEEEECCCEEEEECCC WKAYKILEILEQNEI HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA