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The map label for this gene is intB [H]

Identifier: 148652995

GI number: 148652995

Start: 1454018

End: 1455283

Strand: Direct

Name: intB [H]

Synonym: PsycPRwf_1189

Alternate gene names: 148652995

Gene position: 1454018-1455283 (Clockwise)

Preceding gene: 148652994

Following gene: 148652999

Centisome position: 48.81

GC content: 47.16

Gene sequence:

>1266_bases
ATGGTTATTCATAATAGACGGGATATTAATAGACTTGAGTGCCGTGACAAAGATTATTTGGTCGCAGTCGCTGGCGTACC
CGGACTTAGTGTACGTATCTATCCAAATGGCAAAAAAGAATATTATCTGCGTTACCCCCATCCACATCAGCCCAATAAAC
GTCCGCGTATGACGTTGGGTTCTGTGGAAGATATCAGCCTGCATGAGGCAAAAACCAAAGCTGAGTCTATATTGGATATG
GTGCGAAATGGCACCGACCCTAAAGCCATACGTCAGCAAAAGCAGGTGAATAAATATGCGCATCTAACAAACGCCACGTT
TGCTGAGATTGCTGCAGCTTGGCGTGATAATAAAATCAATAGCCGCCGCCAACGTAAGACCGGCAAGCGCACCTTTAGCG
AGTCAACCTTAAAGTTTTGGGATTTGTGTCTGGGTTATATGTGCGCCGAGATTGGTAACTTGAGGATGAATGACATCACC
AGTGAAACCATCTTGAATGTTTGTGAGTCTATTCAAAATAACGATAATGAAGCTGCCTTTGTGGGTGCCAGTACCCGTTT
ATATACCGAAAAGGTGTTTTCATTCGCCGTGGCTCGTGGGTTATGTGACACCAATGTCGCCATTTATACCCGTGGAGAGC
TGGCACCAGCGGGCTCAGGAAAACACTTGCCAGCACTGACCAAACCCGATGAGTTTGCCGCTTTATTAAAGGACATGGCG
ACGTTTACTGCAGCAAGTGAGCTGACGTTAATGGCAATGAACTTATTGCCTTATGTCTTTGTGCGCAGTATTGATTTACG
CTCTATGCGCTGGGATGAGATTGATTGGACGCATAAGCTCTGGGTTTTTTCACCAACCAAAGGCGAAGGGCGTGAAGATA
TGGTCTCAAGCTTGGTGGTGCCTTTAGCAGATCAGGTGATTACTCGCCTGCGTGACATCCAAAAAATAACCGGTGACAAG
CCTTATGTGTTCGCCTCGATACGCAGCTCAAGCAATGCTTATATGAGTAAGGCCACTTTGGTTCAGGCATTTCACCGGCT
GGGTTACAAGGGAAAACATTGTACGCATGGATTTCGAGCCGCCGCCAAGACACTGCTTATGGAGCAGCCCGAGCTTCGCT
ATTCAGACATTGTCACTGAGCTACAGCTCGGCCACAGGATCAAGGATACCCATGGCGGAGCGTACAACCGATTGGATGAA
ATAAGCACACGTACTCAAATGATGCAGCACTGGGCTGACTATATTGATAGTCTGCGCAGCCGTTAA

Upstream 100 bases:

>100_bases
GCGTGATGAAGATTACTAACAATACTTTAGCATAATAAAAGCGAATATTGTACAAAAATGTGTGCTCCTATTTATATGAC
AAAACAACAAAGTGAGAAGT

Downstream 100 bases:

>100_bases
TACCAAGTGGCCTGCTCTACTAGTCTTTTTTCATTTTTACCACATTCATGCTGGGATAAGCTAAGTCAATCTTGTATTTT
TTGCCACCTCGATAAGCGGT

Product: phage integrase family protein

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MVIHNRRDINRLECRDKDYLVAVAGVPGLSVRIYPNGKKEYYLRYPHPHQPNKRPRMTLGSVEDISLHEAKTKAESILDM
VRNGTDPKAIRQQKQVNKYAHLTNATFAEIAAAWRDNKINSRRQRKTGKRTFSESTLKFWDLCLGYMCAEIGNLRMNDIT
SETILNVCESIQNNDNEAAFVGASTRLYTEKVFSFAVARGLCDTNVAIYTRGELAPAGSGKHLPALTKPDEFAALLKDMA
TFTAASELTLMAMNLLPYVFVRSIDLRSMRWDEIDWTHKLWVFSPTKGEGREDMVSSLVVPLADQVITRLRDIQKITGDK
PYVFASIRSSSNAYMSKATLVQAFHRLGYKGKHCTHGFRAAAKTLLMEQPELRYSDIVTELQLGHRIKDTHGGAYNRLDE
ISTRTQMMQHWADYIDSLRSR

Sequences:

>Translated_421_residues
MVIHNRRDINRLECRDKDYLVAVAGVPGLSVRIYPNGKKEYYLRYPHPHQPNKRPRMTLGSVEDISLHEAKTKAESILDM
VRNGTDPKAIRQQKQVNKYAHLTNATFAEIAAAWRDNKINSRRQRKTGKRTFSESTLKFWDLCLGYMCAEIGNLRMNDIT
SETILNVCESIQNNDNEAAFVGASTRLYTEKVFSFAVARGLCDTNVAIYTRGELAPAGSGKHLPALTKPDEFAALLKDMA
TFTAASELTLMAMNLLPYVFVRSIDLRSMRWDEIDWTHKLWVFSPTKGEGREDMVSSLVVPLADQVITRLRDIQKITGDK
PYVFASIRSSSNAYMSKATLVQAFHRLGYKGKHCTHGFRAAAKTLLMEQPELRYSDIVTELQLGHRIKDTHGGAYNRLDE
ISTRTQMMQHWADYIDSLRSR
>Mature_421_residues
MVIHNRRDINRLECRDKDYLVAVAGVPGLSVRIYPNGKKEYYLRYPHPHQPNKRPRMTLGSVEDISLHEAKTKAESILDM
VRNGTDPKAIRQQKQVNKYAHLTNATFAEIAAAWRDNKINSRRQRKTGKRTFSESTLKFWDLCLGYMCAEIGNLRMNDIT
SETILNVCESIQNNDNEAAFVGASTRLYTEKVFSFAVARGLCDTNVAIYTRGELAPAGSGKHLPALTKPDEFAALLKDMA
TFTAASELTLMAMNLLPYVFVRSIDLRSMRWDEIDWTHKLWVFSPTKGEGREDMVSSLVVPLADQVITRLRDIQKITGDK
PYVFASIRSSSNAYMSKATLVQAFHRLGYKGKHCTHGFRAAAKTLLMEQPELRYSDIVTELQLGHRIKDTHGGAYNRLDE
ISTRTQMMQHWADYIDSLRSR

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1788690, Length=395, Percent_Identity=27.8481012658228, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1788974, Length=415, Percent_Identity=26.0240963855422, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI145693166, Length=421, Percent_Identity=26.603325415677, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 47900; Mature: 47900

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIHNRRDINRLECRDKDYLVAVAGVPGLSVRIYPNGKKEYYLRYPHPHQPNKRPRMTLG
CCCCCCCCCCHHHCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCC
SVEDISLHEAKTKAESILDMVRNGTDPKAIRQQKQVNKYAHLTNATFAEIAAAWRDNKIN
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
SRRQRKTGKRTFSESTLKFWDLCLGYMCAEIGNLRMNDITSETILNVCESIQNNDNEAAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCEEE
VGASTRLYTEKVFSFAVARGLCDTNVAIYTRGELAPAGSGKHLPALTKPDEFAALLKDMA
EECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TFTAASELTLMAMNLLPYVFVRSIDLRSMRWDEIDWTHKLWVFSPTKGEGREDMVSSLVV
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
PLADQVITRLRDIQKITGDKPYVFASIRSSSNAYMSKATLVQAFHRLGYKGKHCTHGFRA
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
AAKTLLMEQPELRYSDIVTELQLGHRIKDTHGGAYNRLDEISTRTQMMQHWADYIDSLRS
HHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure
MVIHNRRDINRLECRDKDYLVAVAGVPGLSVRIYPNGKKEYYLRYPHPHQPNKRPRMTLG
CCCCCCCCCCHHHCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCC
SVEDISLHEAKTKAESILDMVRNGTDPKAIRQQKQVNKYAHLTNATFAEIAAAWRDNKIN
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
SRRQRKTGKRTFSESTLKFWDLCLGYMCAEIGNLRMNDITSETILNVCESIQNNDNEAAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCEEE
VGASTRLYTEKVFSFAVARGLCDTNVAIYTRGELAPAGSGKHLPALTKPDEFAALLKDMA
EECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TFTAASELTLMAMNLLPYVFVRSIDLRSMRWDEIDWTHKLWVFSPTKGEGREDMVSSLVV
HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
PLADQVITRLRDIQKITGDKPYVFASIRSSSNAYMSKATLVQAFHRLGYKGKHCTHGFRA
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
AAKTLLMEQPELRYSDIVTELQLGHRIKDTHGGAYNRLDEISTRTQMMQHWADYIDSLRS
HHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]