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The map label for this gene is yhiD [H]

Identifier: 148652948

GI number: 148652948

Start: 1397309

End: 1397746

Strand: Direct

Name: yhiD [H]

Synonym: PsycPRwf_1142

Alternate gene names: 148652948

Gene position: 1397309-1397746 (Clockwise)

Preceding gene: 148652947

Following gene: 148652949

Centisome position: 46.91

GC content: 45.89

Gene sequence:

>438_bases
ATGCTGGATTTAGATATTAACTTCGGGTTGATGGGCTACCATTTATTAAAGCTTTTTATTGCTTTTTTATTGTCATTGCC
CATTGCTTTGAATCGCGAGATGAAGGACAGTGGCGCAGGGCTTAGGACGTTTCCGCTAGTCACTATTGCCTCATGTGCCT
TTATGCTAGTAGGCATGGATATTTATAAAGGCGATGCCGAGGCGCGTATTATGTATGCGATTATCACGGGCATGGGGTTT
ATCGGTGGTGGTGCAATATTTAAGACAGAAGATGGGGCGAGGGGGACGGCAACCGCGGCAAGTTTATGGAACACGGCCGC
TATTGGCATCTCTGTGGCTACGGGCCGATACGAAATTGCCATTATTTTATCTGTTGTGGGCTTCGTTATCTTGCAGTTCT
CCGAACCCTTTAAAGTAAAGGACAACAGGCTACCTTAA

Upstream 100 bases:

>100_bases
AGAGAGTGCAGAAGCGCTGATGCAGCGGGTCAATCAAAACAATCTTTGAGTATTAAAAGATGACAATATGAATTAGGATA
ATTTACAAAGGAAGTAATTT

Downstream 100 bases:

>100_bases
ATGTTAAAACTGATCAGTGCGATGATAATGAGTAGCGCTATGATGGCAGGCTGTAGTTCAGCCCCATTTAGCCAACAATA
CTCAGGCCGAACCGCAAACG

Product: MgtC/SapB transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLDLDINFGLMGYHLLKLFIAFLLSLPIALNREMKDSGAGLRTFPLVTIASCAFMLVGMDIYKGDAEARIMYAIITGMGF
IGGGAIFKTEDGARGTATAASLWNTAAIGISVATGRYEIAIILSVVGFVILQFSEPFKVKDNRLP

Sequences:

>Translated_145_residues
MLDLDINFGLMGYHLLKLFIAFLLSLPIALNREMKDSGAGLRTFPLVTIASCAFMLVGMDIYKGDAEARIMYAIITGMGF
IGGGAIFKTEDGARGTATAASLWNTAAIGISVATGRYEIAIILSVVGFVILQFSEPFKVKDNRLP
>Mature_145_residues
MLDLDINFGLMGYHLLKLFIAFLLSLPIALNREMKDSGAGLRTFPLVTIASCAFMLVGMDIYKGDAEARIMYAIITGMGF
IGGGAIFKTEDGARGTATAASLWNTAAIGISVATGRYEIAIILSVVGFVILQFSEPFKVKDNRLP

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=126, Percent_Identity=35.7142857142857, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 15586; Mature: 15586

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLDINFGLMGYHLLKLFIAFLLSLPIALNREMKDSGAGLRTFPLVTIASCAFMLVGMD
CEEECCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IYKGDAEARIMYAIITGMGFIGGGAIFKTEDGARGTATAASLWNTAAIGISVATGRYEIA
HCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHEEEEEECCCCHHH
IILSVVGFVILQFSEPFKVKDNRLP
HHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLDLDINFGLMGYHLLKLFIAFLLSLPIALNREMKDSGAGLRTFPLVTIASCAFMLVGMD
CEEECCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IYKGDAEARIMYAIITGMGFIGGGAIFKTEDGARGTATAASLWNTAAIGISVATGRYEIA
HCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHEEEEEECCCCHHH
IILSVVGFVILQFSEPFKVKDNRLP
HHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]