| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is arsB [H]
Identifier: 148652945
GI number: 148652945
Start: 1394235
End: 1395539
Strand: Direct
Name: arsB [H]
Synonym: PsycPRwf_1139
Alternate gene names: 148652945
Gene position: 1394235-1395539 (Clockwise)
Preceding gene: 148652942
Following gene: 148652946
Centisome position: 46.8
GC content: 48.89
Gene sequence:
>1305_bases ATGGTACTTGCGGCGCTTATTTTTGTGGTTACATTGGTGCTGGTTATCTGGCAGCCCAAAGGGCTTGGTATCGGGGTAAG CGCCAGCCTAGGCGCACTGGCGGCGTTATTAATGGGGGTAATCTCCTTAGCGGATATCCCTGTGGTCTGGGACATCGTGT GGAATGCTACCTTTGCGTTTATTGCCATTATTATTATCAGTCTGCTTCTGGATCAAGCCGGGTTTTTTGAATGGATAGCG CTGCATGTGGCACGACTGGGCGGGGGTAATGCCAAGCTATTATTTGTGCTTATTGTGCTACTTGGGGCTGTGGTATCGGC GTTGTTTGCTAATGATGGCGCAGCGCTAATTTTGACCCCTATTGTGATAGCTATGCTGCTTAAGATGCGGGTGTCTGCCG CCACTACCTTGGCTTTTATCATGGCAGCAGGTTTTATTGCGGATACGGCAAGCTTGCCGCTGGTGGTATCCAACCTGGTT AATATCGTATCGGCAGATTTTTTTAACTTAAGCTTTGATCGTTATGCTCAGGTGATGCTGCCGGTGAATATGGTGTCGGT ACTAAGCTCACTTGCGGTACTGTACTTTTTTTATCAAAAAGACATTCCCGCCACATATGAGGTGGCTAATTTACCAAGTC CGCATAGTGTCATTAAGGATAAGGCGACCTTTGTTACTGGCTGGGTGGTATTGGCTGCCTTATTGGTGGGGTTCTTTGTA CTAGAGCCTAGAGGCGTGCCCATTAGCCTAATCGCAGCCATAGGGGCGTTGGTGTTAATCTTGACGGCATTGGCCAATAA AAAACTGTCAGTATCTAGTGTATTAAAAGGGGCACCTTGGCAAGTGGTGGTGTTCTCACTGGGCATGTATCTGGTGGTTT ATGGCCTAAAAAACGAAGGGCTAACCGGTTATCTTACCCAAGCTCTAAATGCTCTGGGCGGGCAGGGGCTGTGGGCGGCC ACAATTGGCACCGGCTTTATGTCGGCGGGTCTGTCCTCGATTATGAATAACATGCCCACTGTATTGATGCAGTCGCTGGC CATTGCTGATGTAAATACATCGACCTTTAGTGAGCCTGAGCAGATACATCAAGCGATGGTCTATGCCAATGTGATTGGCT CAGACTTAGGGCCAAAGATTACGCCCATCGGCTCACTGGCAACCTTGTTGTGGCTACATGTGCTGGCAAGTAAGGAGGTG GTCATTACTTGGGGTTATTACTTTAAGGTGGGCGTTATCCTAACGGTGCCGGTACTGCTGGCAACTTTAATGGCACTGGC GCTTTGGCTACCTATGATCAGTTAG
Upstream 100 bases:
>100_bases ACTCCCTGATTGATAAATAGTAGCACAGGCTTATGCGATATTTTTGAATATATATAGTTTAAATATAGTTGTTTAATTCA CTACACAATAGAGAGTGGTT
Downstream 100 bases:
>100_bases TAGATGGCTAGTAGTTGGCTAGTAGCAAGTAAGTAGAGAATAGGTAGGGCGCAGCTAGTAAAGAATAGAATAGAGCGCAC TAAACAAGCGCTGTAATATG
Product: arsenical pump membrane protein
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: Arsenic efflux pump protein [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MVLAALIFVVTLVLVIWQPKGLGIGVSASLGALAALLMGVISLADIPVVWDIVWNATFAFIAIIIISLLLDQAGFFEWIA LHVARLGGGNAKLLFVLIVLLGAVVSALFANDGAALILTPIVIAMLLKMRVSAATTLAFIMAAGFIADTASLPLVVSNLV NIVSADFFNLSFDRYAQVMLPVNMVSVLSSLAVLYFFYQKDIPATYEVANLPSPHSVIKDKATFVTGWVVLAALLVGFFV LEPRGVPISLIAAIGALVLILTALANKKLSVSSVLKGAPWQVVVFSLGMYLVVYGLKNEGLTGYLTQALNALGGQGLWAA TIGTGFMSAGLSSIMNNMPTVLMQSLAIADVNTSTFSEPEQIHQAMVYANVIGSDLGPKITPIGSLATLLWLHVLASKEV VITWGYYFKVGVILTVPVLLATLMALALWLPMIS
Sequences:
>Translated_434_residues MVLAALIFVVTLVLVIWQPKGLGIGVSASLGALAALLMGVISLADIPVVWDIVWNATFAFIAIIIISLLLDQAGFFEWIA LHVARLGGGNAKLLFVLIVLLGAVVSALFANDGAALILTPIVIAMLLKMRVSAATTLAFIMAAGFIADTASLPLVVSNLV NIVSADFFNLSFDRYAQVMLPVNMVSVLSSLAVLYFFYQKDIPATYEVANLPSPHSVIKDKATFVTGWVVLAALLVGFFV LEPRGVPISLIAAIGALVLILTALANKKLSVSSVLKGAPWQVVVFSLGMYLVVYGLKNEGLTGYLTQALNALGGQGLWAA TIGTGFMSAGLSSIMNNMPTVLMQSLAIADVNTSTFSEPEQIHQAMVYANVIGSDLGPKITPIGSLATLLWLHVLASKEV VITWGYYFKVGVILTVPVLLATLMALALWLPMIS >Mature_434_residues MVLAALIFVVTLVLVIWQPKGLGIGVSASLGALAALLMGVISLADIPVVWDIVWNATFAFIAIIIISLLLDQAGFFEWIA LHVARLGGGNAKLLFVLIVLLGAVVSALFANDGAALILTPIVIAMLLKMRVSAATTLAFIMAAGFIADTASLPLVVSNLV NIVSADFFNLSFDRYAQVMLPVNMVSVLSSLAVLYFFYQKDIPATYEVANLPSPHSVIKDKATFVTGWVVLAALLVGFFV LEPRGVPISLIAAIGALVLILTALANKKLSVSSVLKGAPWQVVVFSLGMYLVVYGLKNEGLTGYLTQALNALGGQGLWAA TIGTGFMSAGLSSIMNNMPTVLMQSLAIADVNTSTFSEPEQIHQAMVYANVIGSDLGPKITPIGSLATLLWLHVLASKEV VITWGYYFKVGVILTVPVLLATLMALALWLPMIS
Specific function: Involved in arsenical resistance. Thought to form the channel of an arsenite pump [H]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsB family [H]
Homologues:
Organism=Escherichia coli, GI87082277, Length=430, Percent_Identity=66.9767441860465, Blast_Score=534, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 [H]
Pfam domain/function: PF02040 ArsB [H]
EC number: NA
Molecular weight: Translated: 45932; Mature: 45932
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLAALIFVVTLVLVIWQPKGLGIGVSASLGALAALLMGVISLADIPVVWDIVWNATFAF CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IAIIIISLLLDQAGFFEWIALHVARLGGGNAKLLFVLIVLLGAVVSALFANDGAALILTP HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVIAMLLKMRVSAATTLAFIMAAGFIADTASLPLVVSNLVNIVSADFFNLSFDRYAQVML HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH PVNMVSVLSSLAVLYFFYQKDIPATYEVANLPSPHSVIKDKATFVTGWVVLAALLVGFFV HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LEPRGVPISLIAAIGALVLILTALANKKLSVSSVLKGAPWQVVVFSLGMYLVVYGLKNEG CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHEECCCCC LTGYLTQALNALGGQGLWAATIGTGFMSAGLSSIMNNMPTVLMQSLAIADVNTSTFSEPE CHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QIHQAMVYANVIGSDLGPKITPIGSLATLLWLHVLASKEVVITWGYYFKVGVILTVPVLL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH ATLMALALWLPMIS HHHHHHHHHHHCCC >Mature Secondary Structure MVLAALIFVVTLVLVIWQPKGLGIGVSASLGALAALLMGVISLADIPVVWDIVWNATFAF CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IAIIIISLLLDQAGFFEWIALHVARLGGGNAKLLFVLIVLLGAVVSALFANDGAALILTP HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVIAMLLKMRVSAATTLAFIMAAGFIADTASLPLVVSNLVNIVSADFFNLSFDRYAQVML HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH PVNMVSVLSSLAVLYFFYQKDIPATYEVANLPSPHSVIKDKATFVTGWVVLAALLVGFFV HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LEPRGVPISLIAAIGALVLILTALANKKLSVSSVLKGAPWQVVVFSLGMYLVVYGLKNEG CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHEECCCCC LTGYLTQALNALGGQGLWAATIGTGFMSAGLSSIMNNMPTVLMQSLAIADVNTSTFSEPE CHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QIHQAMVYANVIGSDLGPKITPIGSLATLLWLHVLASKEVVITWGYYFKVGVILTVPVLL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH ATLMALALWLPMIS HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9006011 [H]