| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is iutA [H]
Identifier: 148652913
GI number: 148652913
Start: 1357161
End: 1359428
Strand: Direct
Name: iutA [H]
Synonym: PsycPRwf_1106
Alternate gene names: 148652913
Gene position: 1357161-1359428 (Clockwise)
Preceding gene: 148652912
Following gene: 148652918
Centisome position: 45.56
GC content: 46.47
Gene sequence:
>2268_bases ATGAAAAACCATCATCTTGCATTATCTGTTCTAAGCTTATGTGTGAGCCAGCAGCTTTATGCCCAAACCGAGGCAGGCGC TGCTGCAAATAATAATCCAAGTGTAGATATCTCTGAGTCGATACAAACGCAGCAGCAAGCAGCCCCTCAAGCAGAATTTG AGGCGATTGTGGTTAAGAGTAAAGCAAAAACAGGGACAGCCTTAGCACAGAAAATTAGTGAAATGCCCTCTGTAACCCAA ATCATTCCCGAAAAAGATATCCAAGCTCAAGCGGTGGGCAGTCGTACCACAGGCGACATATTGGCGCAGCTTATTCCAAG CTTAGGCACCAGTAGCGGCTCGACCAGTAACTACGCCACGACTATGCATGGCCGTCCGGTACAGTTTTTATTAAACGGGG TGCCGTTAACCGGTTCACGTAACTTATCTCGAGAGCTCAACAGCATTGATCCGGCACAACTTGAGAGAGTGGAGGTATTA TCAGGGGCGACCAGTATTTATGGGGCAGGCGCTGCCGGCGGCTTAATTAACCTAGTTACCAAATCTACGCAAGGAGTCGG CTTACAGCACCAAACCCGTTTAGGTCTAAGCAGTGCTCGAGATTTTGACTCTGATTCATTGGGCTACAGCGTGGGCCAAA GCCTTGCTTATGGCGGTGAGCAGATGTGGGGCCGCTTGGATGTTGATTATGAAGAAAAAGGTGGAGAGTTTGACAGTCAC GGTCATCGTATCAGCCCTGATGTCAACCAAACCGACCAGCAAGATACCAAATCACTGAGTGTCAATGCCAATATTGGCGC AAATATTGGACAGTCACAAAGTGTCGATTTGGCAGTGACCTATTATAATGATGAGCAAGAGACGGATTATGGCAACAATC TAGGGGTGTTATTGAAGGGGAAGACGCCTTCACTGCGTGCCGTAAAAGGGGCGCATTTGGATCAAGAGCCGATGACACGC AAAACCTCGGTCAATCTAAACTATAATAACAGTGATTTTGCCAAATCTAACCTGAGCATTACCGGCTATTACCGCGATGA AAAAGGACGTTTTTATCCTTCTGGTAAGCAGGTAGGTAAGGCGGTAATAGTCGCTCAGTCAGAGGCAGATATTGAGGTGG CTGGTGTCCGCGCCGCCATGCAAACTGAGTTTGATATCAAGGATATGCCAACGCTTATAAGTTATGGCGCCGACTATGAG CGTGAAAAGAGTGAGCAGACCTATTACGGTCAAGATTTAGATAAGTTTATTGCCAGTAATGGTCTAATCGCTGAGTCAAA TGGGCATACCTATGCTGGCGGGCCTGACACCACTACCGATAAAATCGGTGCCTTTGTCAATGCAGACATTGATTTAAGCG ATAAGTGGCATACCAGCGCAGGTATACGTTATCAAAAGCTCAAATCAGATACCGATAGCTTTACACCGCTTGCTGAGCAG GTATTGCAAGAGTATTTTAATCAGCCAGCAGGCAAGGTTGCACCTGGCAAGACCAATCACAGTAAGACCTTATTTAATAT AGGCACCAGCTATCAGATTACGCCAAATGATCAAATTTTTGCCAATTTCTCTCAAGGTTTTACCACAGCTGATATCCAGC GCGCGCTACGCGATGTTCCGTCAGGCTTTGTGGTCAACTCTGATAATGTGCAGCCCATCGAAGTGGATAACTATGAGCTG GGCTGGTCGGGCATTCACGGTAACACTCGAGCCAAATTAAGTGGCTTCTATAATGAGTCGGATAAGACGGTACGCTTCAA TGATGATTATACGGTTGAAGTTGTCGACACAGATGAGCGTGTTTATGGGGCAGAAGCGTCTATTAGTCAAAAGCTTGATG ATAATTGGCAGCTGGGCGGCAGCTTGGCGTATACCCGAGGCCAATACAAGAGCCAAGGCGACTGGCTAGAGCTTGGTGCA GATCGTCTGACCCCGATCAAGGGCACAGCTTATGCGCAATATAACTTCGATAAGGGCAGTAATATTCGCCTGCAAGTTCT AGCAATCGATGGCACGGACAGAGCCCATAAAGATCAACAAAAAGACAATGATACTAAGACCAATGCCAATGCTATCTCAG GTTACGCCACGTTTGATTTGTTAGGTCAAATGCAGTTGGGTCAAGGCAAAGGCAGAATTGATTATGGGATTTATAACCTA CTCAATAAAGAGCATATCAATGTGTATCACCAAGCCACCTATGGCGATATGAACCGCCTGCCATCACAAGGCACTACCTA TGGTATCAGCTATACCATTGATTATTAA
Upstream 100 bases:
>100_bases TAGATAAACATTGATTGGCACTTAATTTATGACCTAAAGGTAGAAGCGATTTTGAGCCTCAGCACGCCTAAATCTAGTCC AAAAAAGAGACCCTACCTAT
Downstream 100 bases:
>100_bases GTCTATCAAGGCTTACGAAACTTTAGCAGACCCTGTGCCGGCACTCACTGCTAAGGGCCTGTAAGGGTCTGCTAATAGCC CGCCATAACCAGGCATTACC
Product: TonB-dependent receptor, plug
Products: NA
Alternate protein names: Cloacin receptor [H]
Number of amino acids: Translated: 755; Mature: 755
Protein sequence:
>755_residues MKNHHLALSVLSLCVSQQLYAQTEAGAAANNNPSVDISESIQTQQQAAPQAEFEAIVVKSKAKTGTALAQKISEMPSVTQ IIPEKDIQAQAVGSRTTGDILAQLIPSLGTSSGSTSNYATTMHGRPVQFLLNGVPLTGSRNLSRELNSIDPAQLERVEVL SGATSIYGAGAAGGLINLVTKSTQGVGLQHQTRLGLSSARDFDSDSLGYSVGQSLAYGGEQMWGRLDVDYEEKGGEFDSH GHRISPDVNQTDQQDTKSLSVNANIGANIGQSQSVDLAVTYYNDEQETDYGNNLGVLLKGKTPSLRAVKGAHLDQEPMTR KTSVNLNYNNSDFAKSNLSITGYYRDEKGRFYPSGKQVGKAVIVAQSEADIEVAGVRAAMQTEFDIKDMPTLISYGADYE REKSEQTYYGQDLDKFIASNGLIAESNGHTYAGGPDTTTDKIGAFVNADIDLSDKWHTSAGIRYQKLKSDTDSFTPLAEQ VLQEYFNQPAGKVAPGKTNHSKTLFNIGTSYQITPNDQIFANFSQGFTTADIQRALRDVPSGFVVNSDNVQPIEVDNYEL GWSGIHGNTRAKLSGFYNESDKTVRFNDDYTVEVVDTDERVYGAEASISQKLDDNWQLGGSLAYTRGQYKSQGDWLELGA DRLTPIKGTAYAQYNFDKGSNIRLQVLAIDGTDRAHKDQQKDNDTKTNANAISGYATFDLLGQMQLGQGKGRIDYGIYNL LNKEHINVYHQATYGDMNRLPSQGTTYGISYTIDY
Sequences:
>Translated_755_residues MKNHHLALSVLSLCVSQQLYAQTEAGAAANNNPSVDISESIQTQQQAAPQAEFEAIVVKSKAKTGTALAQKISEMPSVTQ IIPEKDIQAQAVGSRTTGDILAQLIPSLGTSSGSTSNYATTMHGRPVQFLLNGVPLTGSRNLSRELNSIDPAQLERVEVL SGATSIYGAGAAGGLINLVTKSTQGVGLQHQTRLGLSSARDFDSDSLGYSVGQSLAYGGEQMWGRLDVDYEEKGGEFDSH GHRISPDVNQTDQQDTKSLSVNANIGANIGQSQSVDLAVTYYNDEQETDYGNNLGVLLKGKTPSLRAVKGAHLDQEPMTR KTSVNLNYNNSDFAKSNLSITGYYRDEKGRFYPSGKQVGKAVIVAQSEADIEVAGVRAAMQTEFDIKDMPTLISYGADYE REKSEQTYYGQDLDKFIASNGLIAESNGHTYAGGPDTTTDKIGAFVNADIDLSDKWHTSAGIRYQKLKSDTDSFTPLAEQ VLQEYFNQPAGKVAPGKTNHSKTLFNIGTSYQITPNDQIFANFSQGFTTADIQRALRDVPSGFVVNSDNVQPIEVDNYEL GWSGIHGNTRAKLSGFYNESDKTVRFNDDYTVEVVDTDERVYGAEASISQKLDDNWQLGGSLAYTRGQYKSQGDWLELGA DRLTPIKGTAYAQYNFDKGSNIRLQVLAIDGTDRAHKDQQKDNDTKTNANAISGYATFDLLGQMQLGQGKGRIDYGIYNL LNKEHINVYHQATYGDMNRLPSQGTTYGISYTIDY >Mature_755_residues MKNHHLALSVLSLCVSQQLYAQTEAGAAANNNPSVDISESIQTQQQAAPQAEFEAIVVKSKAKTGTALAQKISEMPSVTQ IIPEKDIQAQAVGSRTTGDILAQLIPSLGTSSGSTSNYATTMHGRPVQFLLNGVPLTGSRNLSRELNSIDPAQLERVEVL SGATSIYGAGAAGGLINLVTKSTQGVGLQHQTRLGLSSARDFDSDSLGYSVGQSLAYGGEQMWGRLDVDYEEKGGEFDSH GHRISPDVNQTDQQDTKSLSVNANIGANIGQSQSVDLAVTYYNDEQETDYGNNLGVLLKGKTPSLRAVKGAHLDQEPMTR KTSVNLNYNNSDFAKSNLSITGYYRDEKGRFYPSGKQVGKAVIVAQSEADIEVAGVRAAMQTEFDIKDMPTLISYGADYE REKSEQTYYGQDLDKFIASNGLIAESNGHTYAGGPDTTTDKIGAFVNADIDLSDKWHTSAGIRYQKLKSDTDSFTPLAEQ VLQEYFNQPAGKVAPGKTNHSKTLFNIGTSYQITPNDQIFANFSQGFTTADIQRALRDVPSGFVVNSDNVQPIEVDNYEL GWSGIHGNTRAKLSGFYNESDKTVRFNDDYTVEVVDTDERVYGAEASISQKLDDNWQLGGSLAYTRGQYKSQGDWLELGA DRLTPIKGTAYAQYNFDKGSNIRLQVLAIDGTDRAHKDQQKDNDTKTNANAISGYATFDLLGQMQLGQGKGRIDYGIYNL LNKEHINVYHQATYGDMNRLPSQGTTYGISYTIDY
Specific function: Receptor for cloacin DF13/aerobactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 82205; Mature: 82205
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNHHLALSVLSLCVSQQLYAQTEAGAAANNNPSVDISESIQTQQQAAPQAEFEAIVVKS CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCCCCCEEEEEEEC KAKTGTALAQKISEMPSVTQIIPEKDIQAQAVGSRTTGDILAQLIPSLGTSSGSTSNYAT CCCCHHHHHHHHHHCCCHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEE TMHGRPVQFLLNGVPLTGSRNLSRELNSIDPAQLERVEVLSGATSIYGAGAAGGLINLVT EECCCCHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCCCCEEEEEE KSTQGVGLQHQTRLGLSSARDFDSDSLGYSVGQSLAYGGEQMWGRLDVDYEEKGGEFDSH CCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCEEECCCHHHCCCCCCCC GHRISPDVNQTDQQDTKSLSVNANIGANIGQSQSVDLAVTYYNDEQETDYGNNLGVLLKG CCEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEC KTPSLRAVKGAHLDQEPMTRKTSVNLNYNNSDFAKSNLSITGYYRDEKGRFYPSGKQVGK CCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHCCE AVIVAQSEADIEVAGVRAAMQTEFDIKDMPTLISYGADYEREKSEQTYYGQDLDKFIASN EEEEEECCCCEEEEEEHHHHHCCCCCHHCCHHHHCCCCCCHHCCCCCCCCCHHHHHHHCC GLIAESNGHTYAGGPDTTTDKIGAFVNADIDLSDKWHTSAGIRYQKLKSDTDSFTPLAEQ CEEEECCCCEECCCCCCCHHHCCEEEECCCCCCCCCCCCCCCEEEHHCCCCCCCCHHHHH VLQEYFNQPAGKVAPGKTNHSKTLFNIGTSYQITPNDQIFANFSQGFTTADIQRALRDVP HHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEECCCCCCHHHHHHHHHHCC SGFVVNSDNVQPIEVDNYELGWSGIHGNTRAKLSGFYNESDKTVRFNDDYTVEVVDTDER CCEEECCCCCCEEEECCEECCEECCCCCCCEEEEEEECCCCCEEEECCCEEEEEEECCCC VYGAEASISQKLDDNWQLGGSLAYTRGQYKSQGDWLELGADRLTPIKGTAYAQYNFDKGS EECCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCC NIRLQVLAIDGTDRAHKDQQKDNDTKTNANAISGYATFDLLGQMQLGQGKGRIDYGIYNL CEEEEEEEECCCCCHHCCHHCCCCCCCCCCCCCCEEHHHHHCCEEECCCCCCEEHHHHHH LNKEHINVYHQATYGDMNRLPSQGTTYGISYTIDY CCCCCEEEEEEECCCHHHCCCCCCCEEEEEEEECC >Mature Secondary Structure MKNHHLALSVLSLCVSQQLYAQTEAGAAANNNPSVDISESIQTQQQAAPQAEFEAIVVKS CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCCCCCEEEEEEEC KAKTGTALAQKISEMPSVTQIIPEKDIQAQAVGSRTTGDILAQLIPSLGTSSGSTSNYAT CCCCHHHHHHHHHHCCCHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEE TMHGRPVQFLLNGVPLTGSRNLSRELNSIDPAQLERVEVLSGATSIYGAGAAGGLINLVT EECCCCHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCCCCEEEEEE KSTQGVGLQHQTRLGLSSARDFDSDSLGYSVGQSLAYGGEQMWGRLDVDYEEKGGEFDSH CCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCEEECCCHHHCCCCCCCC GHRISPDVNQTDQQDTKSLSVNANIGANIGQSQSVDLAVTYYNDEQETDYGNNLGVLLKG CCEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEC KTPSLRAVKGAHLDQEPMTRKTSVNLNYNNSDFAKSNLSITGYYRDEKGRFYPSGKQVGK CCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHCCE AVIVAQSEADIEVAGVRAAMQTEFDIKDMPTLISYGADYEREKSEQTYYGQDLDKFIASN EEEEEECCCCEEEEEEHHHHHCCCCCHHCCHHHHCCCCCCHHCCCCCCCCCHHHHHHHCC GLIAESNGHTYAGGPDTTTDKIGAFVNADIDLSDKWHTSAGIRYQKLKSDTDSFTPLAEQ CEEEECCCCEECCCCCCCHHHCCEEEECCCCCCCCCCCCCCCEEEHHCCCCCCCCHHHHH VLQEYFNQPAGKVAPGKTNHSKTLFNIGTSYQITPNDQIFANFSQGFTTADIQRALRDVP HHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEECCCCCCHHHHHHHHHHCC SGFVVNSDNVQPIEVDNYELGWSGIHGNTRAKLSGFYNESDKTVRFNDDYTVEVVDTDER CCEEECCCCCCEEEECCEECCEECCCCCCCEEEEEEECCCCCEEEECCCEEEEEEECCCC VYGAEASISQKLDDNWQLGGSLAYTRGQYKSQGDWLELGADRLTPIKGTAYAQYNFDKGS EECCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCC NIRLQVLAIDGTDRAHKDQQKDNDTKTNANAISGYATFDLLGQMQLGQGKGRIDYGIYNL CEEEEEEEECCCCCHHCCHHCCCCCCCCCCCCCCEEHHHHHCCEEECCCCCCEEHHHHHH LNKEHINVYHQATYGDMNRLPSQGTTYGISYTIDY CCCCCEEEEEEECCCHHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA