| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is fhuB [H]
Identifier: 148652911
GI number: 148652911
Start: 1353210
End: 1355294
Strand: Direct
Name: fhuB [H]
Synonym: PsycPRwf_1104
Alternate gene names: 148652911
Gene position: 1353210-1355294 (Clockwise)
Preceding gene: 148652910
Following gene: 148652912
Centisome position: 45.43
GC content: 52.09
Gene sequence:
>2085_bases ATGCCTAATAGTAATCAGAACAAAGACAATAGCAATAGCCATCTCCCTAAACGCTCAACGCAAGCGGCTACAGACAGGCC AGTTGCAGTCTCCTCCTTGGCTTCGGCAGTAGAGGTCAAACACTGGCGGGCATGGGTCTTGATACTGATACTGTTAGCGG CTATTGCCATCAGCAGTTCGGTATTGATTGACAGGCTTTGGGAGCTACCAGTTAGCCAGCTGTTTAAGTCAAGCTTTACA CTTGATGTGGCGGATATGGCGGTGCAGTTAAAGCTGGTCGCTACCAGCGTGGTGGCCTTATTGGCTGGAGGGCTACTGGG GGTGGTCAGTGTGTTATTACAACAACTGGTCAAAAACCCTTTGGCCTCTGATACCACCTTGGCCATTGGCACTGGCGCTC AATTGGCGCTGCTTATTGCGACCTTATTTGTGCCAAGTTTAGCCATTTATGGTGGGGTATGGATTGCCTTTGTCGGGGCG CTGTTTAGTTTGGTATTGGTATTTAGCTTATCAGCGCCCAGCCGTTTTAATCCACTAATCTTAGTGTTAGCCGGACTGGT GGTAAATATTTTACTGGCTTCATTTGCCAGCACTTTGGTGTTGTTTTTTACTGAGCATAGCGTCGGTATTTTGTCATGGG CGGCTGGGTTTTTAACGCAAAATAATTGGCATACCACGGTTAAGCTTGCCGTAACGGCCATAGCACTGGCGGCGATAAGT ATCCCCTTATTAAAGCCGTTAACCCTAATGAGCCTAGATGATATGCAAGCCAAACGGCTGGGCGTACCTATTAATGCCTT ACGTTTAGCGGTCATTGCTATCGTGGCTATCGTATCGGCGCTGGTGGTCAGTGAGGTGGGCTTGATTGGGTTTATCGGCT TGGCGGCAGCAAGTTTGGTGAATGCCTTGGGTATTGGCTCTATCGGGCGCAGATTGGTAGCGGCCTTTGGCTTTGGCGCT TTATTGCTGTGGTTGACCAGTAATGTGGCGCTGCTATTAGAGCCGGTGATGGGGACGCCGATACCGGCAGGCTCTATCAC TGGCGTGTTGGGTGCCCCGCTGATTATTTGGCTGATTTTACGTCAAAGACGCCAAGGCGTGACGCCCATTACGCCGATGT TCACGCCCCAGCGTAAAGCCATCAACTGGTGGCGGTGGAGCGTGGGCGTACTGCTACTTATTGCTTTAGTTAGTGTATGG GTCAAAGACCTCTCAGGCATTGCCTTTAGTACAGATTGGGCGCTAACCCAGCAATACCGATTGCCGCGCACGCTAAGTGC TGCTGCTACCGGTGTCATGCTGGCTACCGCCGGGGTGTTGCTACAGACCTTGACTCGCAACCCCATGGCCAGCCCGGAAG TACTGGGCATTAGCTCTGGGGCTGCATTGGGAGTCATTGGTGGCTTTTTATTGTTGCCCGCTTTTGGGATAAAAGCTGGT GCCCTAAGCTTGGTTGGCTCAGGGCTGGCAGGGGCGTTTTTGGTGCTATTACTGATTATTTGGTTGGCGCGTAAAGTCAC GCCAGCTTACTTACTGCTGGTCGGTATCGGGATTGCCGCTATGATGGATGGCATCATGAGTATGGTCAAGCTGTCAGGTG ACCCAAGACTTGAGGCCATGCTGAGCTGGCTATCGGGCACCACGTATAGCGCCAGCCCTGAGACGGTCTGGTACCTGATG ATAGCAGCAGCGGGACTGGTGGCACTTAGTATGTTATTGATTAAGCCGCTAAGGGTGCTGGGATTAGGTGAGTCGGTGGC CAAAAGCTTGGGCGTTAAGGTGAGATTTTATCAATTGGCGCTACTGATCGTGGTGGCAGCCCTGAGTACAGTCAGCACAT TGGCGGTGGGTCCGCTCAGCTTTATTGGGCTGATGGTGCCGCATTTGGCCACTTCTTTAGGGGCAGTGCAGCTTGAGAAG CAGCTGCCATTAGCAGCACTTCTGGGCGCGGGGGTGATGGTCTTAGCGGATTGGATTGGCCGCTATATCATCTTCCCTTA TGAGCTGCCGGCAGGCACCATAGCCGCTATCATTGGGGGACTGTACTTTATATGGCTCATTCGGCGCAGTTCGGTTCATC AGTAA
Upstream 100 bases:
>100_bases ATTTATGGCGGTATGGCATCACTCACCAGTTTGGCAGACAATCTTGCCTCAGCTACCTTAGTTGGAGGCCGTGCTCATGA CATCAAATAATCGTCACTCT
Downstream 100 bases:
>100_bases GCTAAGATTAGCATTATCTGATGACACACTTATCACCGCCGCCTGGCTCGTTATCACAACAAGCCTACCGTGAGGATCCA GATAGCCGCCAAGTACGCCG
Product: iron-hydroxamate transporter permease
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 694; Mature: 693
Protein sequence:
>694_residues MPNSNQNKDNSNSHLPKRSTQAATDRPVAVSSLASAVEVKHWRAWVLILILLAAIAISSSVLIDRLWELPVSQLFKSSFT LDVADMAVQLKLVATSVVALLAGGLLGVVSVLLQQLVKNPLASDTTLAIGTGAQLALLIATLFVPSLAIYGGVWIAFVGA LFSLVLVFSLSAPSRFNPLILVLAGLVVNILLASFASTLVLFFTEHSVGILSWAAGFLTQNNWHTTVKLAVTAIALAAIS IPLLKPLTLMSLDDMQAKRLGVPINALRLAVIAIVAIVSALVVSEVGLIGFIGLAAASLVNALGIGSIGRRLVAAFGFGA LLLWLTSNVALLLEPVMGTPIPAGSITGVLGAPLIIWLILRQRRQGVTPITPMFTPQRKAINWWRWSVGVLLLIALVSVW VKDLSGIAFSTDWALTQQYRLPRTLSAAATGVMLATAGVLLQTLTRNPMASPEVLGISSGAALGVIGGFLLLPAFGIKAG ALSLVGSGLAGAFLVLLLIIWLARKVTPAYLLLVGIGIAAMMDGIMSMVKLSGDPRLEAMLSWLSGTTYSASPETVWYLM IAAAGLVALSMLLIKPLRVLGLGESVAKSLGVKVRFYQLALLIVVAALSTVSTLAVGPLSFIGLMVPHLATSLGAVQLEK QLPLAALLGAGVMVLADWIGRYIIFPYELPAGTIAAIIGGLYFIWLIRRSSVHQ
Sequences:
>Translated_694_residues MPNSNQNKDNSNSHLPKRSTQAATDRPVAVSSLASAVEVKHWRAWVLILILLAAIAISSSVLIDRLWELPVSQLFKSSFT LDVADMAVQLKLVATSVVALLAGGLLGVVSVLLQQLVKNPLASDTTLAIGTGAQLALLIATLFVPSLAIYGGVWIAFVGA LFSLVLVFSLSAPSRFNPLILVLAGLVVNILLASFASTLVLFFTEHSVGILSWAAGFLTQNNWHTTVKLAVTAIALAAIS IPLLKPLTLMSLDDMQAKRLGVPINALRLAVIAIVAIVSALVVSEVGLIGFIGLAAASLVNALGIGSIGRRLVAAFGFGA LLLWLTSNVALLLEPVMGTPIPAGSITGVLGAPLIIWLILRQRRQGVTPITPMFTPQRKAINWWRWSVGVLLLIALVSVW VKDLSGIAFSTDWALTQQYRLPRTLSAAATGVMLATAGVLLQTLTRNPMASPEVLGISSGAALGVIGGFLLLPAFGIKAG ALSLVGSGLAGAFLVLLLIIWLARKVTPAYLLLVGIGIAAMMDGIMSMVKLSGDPRLEAMLSWLSGTTYSASPETVWYLM IAAAGLVALSMLLIKPLRVLGLGESVAKSLGVKVRFYQLALLIVVAALSTVSTLAVGPLSFIGLMVPHLATSLGAVQLEK QLPLAALLGAGVMVLADWIGRYIIFPYELPAGTIAAIIGGLYFIWLIRRSSVHQ >Mature_693_residues PNSNQNKDNSNSHLPKRSTQAATDRPVAVSSLASAVEVKHWRAWVLILILLAAIAISSSVLIDRLWELPVSQLFKSSFTL DVADMAVQLKLVATSVVALLAGGLLGVVSVLLQQLVKNPLASDTTLAIGTGAQLALLIATLFVPSLAIYGGVWIAFVGAL FSLVLVFSLSAPSRFNPLILVLAGLVVNILLASFASTLVLFFTEHSVGILSWAAGFLTQNNWHTTVKLAVTAIALAAISI PLLKPLTLMSLDDMQAKRLGVPINALRLAVIAIVAIVSALVVSEVGLIGFIGLAAASLVNALGIGSIGRRLVAAFGFGAL LLWLTSNVALLLEPVMGTPIPAGSITGVLGAPLIIWLILRQRRQGVTPITPMFTPQRKAINWWRWSVGVLLLIALVSVWV KDLSGIAFSTDWALTQQYRLPRTLSAAATGVMLATAGVLLQTLTRNPMASPEVLGISSGAALGVIGGFLLLPAFGIKAGA LSLVGSGLAGAFLVLLLIIWLARKVTPAYLLLVGIGIAAMMDGIMSMVKLSGDPRLEAMLSWLSGTTYSASPETVWYLMI AAAGLVALSMLLIKPLRVLGLGESVAKSLGVKVRFYQLALLIVVAALSTVSTLAVGPLSFIGLMVPHLATSLGAVQLEKQ LPLAALLGAGVMVLADWIGRYIIFPYELPAGTIAAIIGGLYFIWLIRRSSVHQ
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=642, Percent_Identity=37.3831775700935, Blast_Score=288, Evalue=1e-78, Organism=Escherichia coli, GI1790740, Length=289, Percent_Identity=35.2941176470588, Blast_Score=142, Evalue=6e-35, Organism=Escherichia coli, GI1790741, Length=278, Percent_Identity=38.1294964028777, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1786805, Length=298, Percent_Identity=33.2214765100671, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI1788004, Length=280, Percent_Identity=32.1428571428571, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1786804, Length=288, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 - InterPro: IPR006311 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 72941; Mature: 72809
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSNQNKDNSNSHLPKRSTQAATDRPVAVSSLASAVEVKHWRAWVLILILLAAIAISSS CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIDRLWELPVSQLFKSSFTLDVADMAVQLKLVATSVVALLAGGLLGVVSVLLQQLVKNP HHHHHHHHCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC LASDTTLAIGTGAQLALLIATLFVPSLAIYGGVWIAFVGALFSLVLVFSLSAPSRFNPLI CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LVLAGLVVNILLASFASTLVLFFTEHSVGILSWAAGFLTQNNWHTTVKLAVTAIALAAIS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IPLLKPLTLMSLDDMQAKRLGVPINALRLAVIAIVAIVSALVVSEVGLIGFIGLAAASLV HHHHCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NALGIGSIGRRLVAAFGFGALLLWLTSNVALLLEPVMGTPIPAGSITGVLGAPLIIWLIL HHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH RQRRQGVTPITPMFTPQRKAINWWRWSVGVLLLIALVSVWVKDLSGIAFSTDWALTQQYR HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHC LPRTLSAAATGVMLATAGVLLQTLTRNPMASPEVLGISSGAALGVIGGFLLLPAFGIKAG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHH ALSLVGSGLAGAFLVLLLIIWLARKVTPAYLLLVGIGIAAMMDGIMSMVKLSGDPRLEAM HHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LSWLSGTTYSASPETVWYLMIAAAGLVALSMLLIKPLRVLGLGESVAKSLGVKVRFYQLA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH LLIVVAALSTVSTLAVGPLSFIGLMVPHLATSLGAVQLEKQLPLAALLGAGVMVLADWIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RYIIFPYELPAGTIAAIIGGLYFIWLIRRSSVHQ CCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PNSNQNKDNSNSHLPKRSTQAATDRPVAVSSLASAVEVKHWRAWVLILILLAAIAISSS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIDRLWELPVSQLFKSSFTLDVADMAVQLKLVATSVVALLAGGLLGVVSVLLQQLVKNP HHHHHHHHCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC LASDTTLAIGTGAQLALLIATLFVPSLAIYGGVWIAFVGALFSLVLVFSLSAPSRFNPLI CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LVLAGLVVNILLASFASTLVLFFTEHSVGILSWAAGFLTQNNWHTTVKLAVTAIALAAIS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IPLLKPLTLMSLDDMQAKRLGVPINALRLAVIAIVAIVSALVVSEVGLIGFIGLAAASLV HHHHCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NALGIGSIGRRLVAAFGFGALLLWLTSNVALLLEPVMGTPIPAGSITGVLGAPLIIWLIL HHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH RQRRQGVTPITPMFTPQRKAINWWRWSVGVLLLIALVSVWVKDLSGIAFSTDWALTQQYR HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHC LPRTLSAAATGVMLATAGVLLQTLTRNPMASPEVLGISSGAALGVIGGFLLLPAFGIKAG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHH ALSLVGSGLAGAFLVLLLIIWLARKVTPAYLLLVGIGIAAMMDGIMSMVKLSGDPRLEAM HHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LSWLSGTTYSASPETVWYLMIAAAGLVALSMLLIKPLRVLGLGESVAKSLGVKVRFYQLA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH LLIVVAALSTVSTLAVGPLSFIGLMVPHLATSLGAVQLEKQLPLAALLGAGVMVLADWIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RYIIFPYELPAGTIAAIIGGLYFIWLIRRSSVHQ CCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258 [H]