Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is pucA [H]

Identifier: 148652817

GI number: 148652817

Start: 1202130

End: 1203452

Strand: Direct

Name: pucA [H]

Synonym: PsycPRwf_1010

Alternate gene names: 148652817

Gene position: 1202130-1203452 (Clockwise)

Preceding gene: 148652816

Following gene: 148652818

Centisome position: 40.35

GC content: 49.81

Gene sequence:

>1323_bases
ATGAGCAATCAGATATCTGATATTCTGCAGCTGGCCGATCAAGCCATCGCCACTGATACAGAGGCGGTGCTTGCAACAGT
CGTACACATTGAAGGCTCTGCCTACCGTAAGCCTGGTGCCATGATGCTCATTTGCGCTGATGGTCAGTCGGTGGGTATGA
TAAGTGGCGGCTGCTTAGAGCCGCATATTATAAAAAAGGCGTTATGGCTGACCCGAAATGGGCCAGTGGTACAGGTCTAT
CAAACGGGTGAAGACTTAACCGAGGAGGCTGCTGCAAAGACGCAGGCTGTCGATGATATTGAGTTTAGTATTCAAACAGA
GCTTAATTTTGGTCTGGGCTGTAATGGGCGCGTGCATGTGCTGTTTGAGCGCTTAGATACTGCCAGAGCGTATCTTAAGA
TGATTAGACAGGTTAGGCAAACCCAGCAGCCAGTGACAATGGCGACGTTAATCCGCTCACAAGAGGCGAGCCACCCAGTG
GGCTTACACGTTCAGTTAACGTCAGATTCTAATGCAGTACAAGTCGCTTCTGCTAATAACATTACCGCTGATTGTGATGA
TTTGATTAATCAAGCCATTCAAAGCTTGTCGGCCAAATATGTGTCAGCCAAACACATAGGGTCTGGCCTAACACAAAAAC
CAACCGAACAAAAACCAACCGATTTTGCCACCATCACCAGTGTGGCTCAGCAAGATATCACTCAGCCAGTACAGACTCAG
TGGCTGGTTCAGCAGCTGCAACCACAAAAGCGGCTGCTTATCTGCGGCGCTGGCAATGATGTGCAGCCACTGGTGCGCTT
AGCCAAAATGCAGGACTGGCACGTCACTGTGATCGACAGTCGCTCTCACTATGCTACTCGTTCACGCTTTATGGCGGCTG
ATGAGGTGCAGTGTGTAGCGCTTGAGGATACCCAGACCTTATTGGCACTGAGCCAAAATGCAGCGGTGGCAGTGATGTCG
CACAGCCTTACTCAAGATAGAGCTCGGCTACAAGTGCTGCTTGCCAATCCGCCTTTATATTTAGGACAGCTGGGCCCCAA
ATACCGTACTGAGCGCCTAATCGATGAGATTAAGCAAGCGTATCAGGGCGATGTTAATGGCTTAGAGCAAGGCATTGATC
AGCTTAATTATCCTATCGGCTACAAGCTAGGCGGTGATGGGCCTGAGGCGTTGGCGCTAGGAGTTATGGCGCAAATCAGT
GCAGTGATGCATGGTAAAGAAAACACACTCAGTGCGTCTATAAATGCAAAGAAGATGAAGCAGGCGTCTCAGCCGAAGAC
AGCGTCAGATAGACGGTATAAAGACAGATGGGCCGCTCAGTGA

Upstream 100 bases:

>100_bases
ATGCGGTCTATAACGCGGTTGGGGTACGTATTTATGACTTTCCGATTACGCTAGATAAGCTGATTGATCACTTACCTGAC
TAACAACAAAAGGTACCCTT

Downstream 100 bases:

>100_bases
TAAGGGTGGTTTTAATCAAATGAGTGTTTCTAAATGAGTGTGTTTAAATGAGTGTGTCTAGCTTATCCAAACTATCCGAA
TTATCTACTGTTCCTGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: XDHase subunit A [H]

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MSNQISDILQLADQAIATDTEAVLATVVHIEGSAYRKPGAMMLICADGQSVGMISGGCLEPHIIKKALWLTRNGPVVQVY
QTGEDLTEEAAAKTQAVDDIEFSIQTELNFGLGCNGRVHVLFERLDTARAYLKMIRQVRQTQQPVTMATLIRSQEASHPV
GLHVQLTSDSNAVQVASANNITADCDDLINQAIQSLSAKYVSAKHIGSGLTQKPTEQKPTDFATITSVAQQDITQPVQTQ
WLVQQLQPQKRLLICGAGNDVQPLVRLAKMQDWHVTVIDSRSHYATRSRFMAADEVQCVALEDTQTLLALSQNAAVAVMS
HSLTQDRARLQVLLANPPLYLGQLGPKYRTERLIDEIKQAYQGDVNGLEQGIDQLNYPIGYKLGGDGPEALALGVMAQIS
AVMHGKENTLSASINAKKMKQASQPKTASDRRYKDRWAAQ

Sequences:

>Translated_440_residues
MSNQISDILQLADQAIATDTEAVLATVVHIEGSAYRKPGAMMLICADGQSVGMISGGCLEPHIIKKALWLTRNGPVVQVY
QTGEDLTEEAAAKTQAVDDIEFSIQTELNFGLGCNGRVHVLFERLDTARAYLKMIRQVRQTQQPVTMATLIRSQEASHPV
GLHVQLTSDSNAVQVASANNITADCDDLINQAIQSLSAKYVSAKHIGSGLTQKPTEQKPTDFATITSVAQQDITQPVQTQ
WLVQQLQPQKRLLICGAGNDVQPLVRLAKMQDWHVTVIDSRSHYATRSRFMAADEVQCVALEDTQTLLALSQNAAVAVMS
HSLTQDRARLQVLLANPPLYLGQLGPKYRTERLIDEIKQAYQGDVNGLEQGIDQLNYPIGYKLGGDGPEALALGVMAQIS
AVMHGKENTLSASINAKKMKQASQPKTASDRRYKDRWAAQ
>Mature_439_residues
SNQISDILQLADQAIATDTEAVLATVVHIEGSAYRKPGAMMLICADGQSVGMISGGCLEPHIIKKALWLTRNGPVVQVYQ
TGEDLTEEAAAKTQAVDDIEFSIQTELNFGLGCNGRVHVLFERLDTARAYLKMIRQVRQTQQPVTMATLIRSQEASHPVG
LHVQLTSDSNAVQVASANNITADCDDLINQAIQSLSAKYVSAKHIGSGLTQKPTEQKPTDFATITSVAQQDITQPVQTQW
LVQQLQPQKRLLICGAGNDVQPLVRLAKMQDWHVTVIDSRSHYATRSRFMAADEVQCVALEDTQTLLALSQNAAVAVMSH
SLTQDRARLQVLLANPPLYLGQLGPKYRTERLIDEIKQAYQGDVNGLEQGIDQLNYPIGYKLGGDGPEALALGVMAQISA
VMHGKENTLSASINAKKMKQASQPKTASDRRYKDRWAAQ

Specific function: Oxidizes hypoxanthine and xanthine to uric acid. PucA subunit could exert a molybdenum cofactor recruiting function [H]

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 48052; Mature: 47921

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQISDILQLADQAIATDTEAVLATVVHIEGSAYRKPGAMMLICADGQSVGMISGGCLE
CCCHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCCEECCCCCC
PHIIKKALWLTRNGPVVQVYQTGEDLTEEAAAKTQAVDDIEFSIQTELNFGLGCNGRVHV
HHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEH
LFERLDTARAYLKMIRQVRQTQQPVTMATLIRSQEASHPVGLHVQLTSDSNAVQVASANN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCC
ITADCDDLINQAIQSLSAKYVSAKHIGSGLTQKPTEQKPTDFATITSVAQQDITQPVQTQ
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
WLVQQLQPQKRLLICGAGNDVQPLVRLAKMQDWHVTVIDSRSHYATRSRFMAADEVQCVA
HHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCEEEEE
LEDTQTLLALSQNAAVAVMSHSLTQDRARLQVLLANPPLYLGQLGPKYRTERLIDEIKQA
ECCCHHHHHCCCCCEEEEEHHHHHHCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHH
YQGDVNGLEQGIDQLNYPIGYKLGGDGPEALALGVMAQISAVMHGKENTLSASINAKKMK
HCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHH
QASQPKTASDRRYKDRWAAQ
HCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure 
SNQISDILQLADQAIATDTEAVLATVVHIEGSAYRKPGAMMLICADGQSVGMISGGCLE
CCHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCCEECCCCCC
PHIIKKALWLTRNGPVVQVYQTGEDLTEEAAAKTQAVDDIEFSIQTELNFGLGCNGRVHV
HHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEH
LFERLDTARAYLKMIRQVRQTQQPVTMATLIRSQEASHPVGLHVQLTSDSNAVQVASANN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCC
ITADCDDLINQAIQSLSAKYVSAKHIGSGLTQKPTEQKPTDFATITSVAQQDITQPVQTQ
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
WLVQQLQPQKRLLICGAGNDVQPLVRLAKMQDWHVTVIDSRSHYATRSRFMAADEVQCVA
HHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCEEEEE
LEDTQTLLALSQNAAVAVMSHSLTQDRARLQVLLANPPLYLGQLGPKYRTERLIDEIKQA
ECCCHHHHHCCCCCEEEEEHHHHHHCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHH
YQGDVNGLEQGIDQLNYPIGYKLGGDGPEALALGVMAQISAVMHGKENTLSASINAKKMK
HCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHH
QASQPKTASDRRYKDRWAAQ
HCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11344136 [H]