| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652723
Identifier: 148652723
GI number: 148652723
Start: 1093904
End: 1094758
Strand: Direct
Name: 148652723
Synonym: PsycPRwf_0916
Alternate gene names: NA
Gene position: 1093904-1094758 (Clockwise)
Preceding gene: 148652715
Following gene: 148652727
Centisome position: 36.72
GC content: 42.46
Gene sequence:
>855_bases ATGAAACTTTTTAAATTAACAGCAATCACTGCTGCAGTACTAGGTTCATCAGTAGCTATGGCTGCTAACACGGTTGTTGT TGACAACACTCAAGCTGGTAACGACGTCGTAGTAGTTACTGATGCGCAACCAGTTGGTTATCAGTATGACCAAAACGCTG GTGTTATCGCTAACACGACAGGCGCTTTAGTAGGTACTGGCAAAACTTTATTTAACACTGCAGTTCATCCAGCTGCTGTA AGTGCTGAGATTGGTACTTTAGGTTACGGTGCTAACATCGCTTGGGGTCTAAACGAAACTACTGAACTAACTGCAGGTTG GAACGGTTACAACGACGACGGTACTAAAGACTTAGACGCTAGTGATTCTTGGATCAACTGGGGTAAAGTATTAGGCGACG GTTGGGGTAACTTCGAAGGCGATATGAGATATGATATCGACGCTAGCAACCCATACATCGGTGTAAACTTACGTCCATGG GCTACTAACTTCACAGTGGGTACTGGTATTTTAGTTCCTGATAATAAAATTAAAGCTTCTTTAACTCCTACTGGTGATAG CGCACGAGTTAAAATTGATGGTGAATCGTTCACCATCAATAATGGTGAAACTGTTGATGTTGAAATTGAAAACAAAAACA AACTTGCTCCATACTTAACTGTTGGCTACCGTCCAAACATCAACCAAAACTGGGGTCTATTCGGCGAGCTAGGCGCAGCT TACATGGGTAAAATGAAAGCTGACGTTAAATCTAGTGCTGGTGATGTAGCGTTAGAAGAAGCCGCTAAGAAAGAAATCGA AGATGACAACATCTGGTACCCAATCGTTAAAGCTGGTGTAACTTACCGCTTCTAA
Upstream 100 bases:
>100_bases TTGAATTTGCACAGATCCAATATAGATGATGGCTTAAGTTGCTTTTTAGATTGTGGCCTCTTAATTTACGGTTCATTTAA GTTTATACTTTGGAGATGTT
Downstream 100 bases:
>100_bases TAATTGCTTATCTTATGGCGATAAAAAAACGACCTCTCGGGGTCGTTTTTTTATGCTTGTTATTTATTCAAGCCTTTAAT TTATTAACATTATAAGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Porin Protein Associated With Imipenem Resistance; Outer Membrane Protein; Outer Membrane B; Carbapenem-Associated Resistance Protein
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKLFKLTAITAAVLGSSVAMAANTVVVDNTQAGNDVVVVTDAQPVGYQYDQNAGVIANTTGALVGTGKTLFNTAVHPAAV SAEIGTLGYGANIAWGLNETTELTAGWNGYNDDGTKDLDASDSWINWGKVLGDGWGNFEGDMRYDIDASNPYIGVNLRPW ATNFTVGTGILVPDNKIKASLTPTGDSARVKIDGESFTINNGETVDVEIENKNKLAPYLTVGYRPNINQNWGLFGELGAA YMGKMKADVKSSAGDVALEEAAKKEIEDDNIWYPIVKAGVTYRF
Sequences:
>Translated_284_residues MKLFKLTAITAAVLGSSVAMAANTVVVDNTQAGNDVVVVTDAQPVGYQYDQNAGVIANTTGALVGTGKTLFNTAVHPAAV SAEIGTLGYGANIAWGLNETTELTAGWNGYNDDGTKDLDASDSWINWGKVLGDGWGNFEGDMRYDIDASNPYIGVNLRPW ATNFTVGTGILVPDNKIKASLTPTGDSARVKIDGESFTINNGETVDVEIENKNKLAPYLTVGYRPNINQNWGLFGELGAA YMGKMKADVKSSAGDVALEEAAKKEIEDDNIWYPIVKAGVTYRF >Mature_284_residues MKLFKLTAITAAVLGSSVAMAANTVVVDNTQAGNDVVVVTDAQPVGYQYDQNAGVIANTTGALVGTGKTLFNTAVHPAAV SAEIGTLGYGANIAWGLNETTELTAGWNGYNDDGTKDLDASDSWINWGKVLGDGWGNFEGDMRYDIDASNPYIGVNLRPW ATNFTVGTGILVPDNKIKASLTPTGDSARVKIDGESFTINNGETVDVEIENKNKLAPYLTVGYRPNINQNWGLFGELGAA YMGKMKADVKSSAGDVALEEAAKKEIEDDNIWYPIVKAGVTYRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30216; Mature: 30216
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFKLTAITAAVLGSSVAMAANTVVVDNTQAGNDVVVVTDAQPVGYQYDQNAGVIANTT CCEEEHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEECCCCCCEEECCCCCEEEECC GALVGTGKTLFNTAVHPAAVSAEIGTLGYGANIAWGLNETTELTAGWNGYNDDGTKDLDA CEEEECCHHHHHCCCCCCEEEEECCEEECCCEEEECCCCCEEEEECCCCCCCCCCCCCCC SDSWINWGKVLGDGWGNFEGDMRYDIDASNPYIGVNLRPWATNFTVGTGILVPDNKIKAS CCCEEECHHHHCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEECEEEEECCCCEEEE LTPTGDSARVKIDGESFTINNGETVDVEIENKNKLAPYLTVGYRPNINQNWGLFGELGAA ECCCCCCCEEEECCCEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHH YMGKMKADVKSSAGDVALEEAAKKEIEDDNIWYPIVKAGVTYRF HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEECCEEECC >Mature Secondary Structure MKLFKLTAITAAVLGSSVAMAANTVVVDNTQAGNDVVVVTDAQPVGYQYDQNAGVIANTT CCEEEHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEECCCCCCEEECCCCCEEEECC GALVGTGKTLFNTAVHPAAVSAEIGTLGYGANIAWGLNETTELTAGWNGYNDDGTKDLDA CEEEECCHHHHHCCCCCCEEEEECCEEECCCEEEECCCCCEEEEECCCCCCCCCCCCCCC SDSWINWGKVLGDGWGNFEGDMRYDIDASNPYIGVNLRPWATNFTVGTGILVPDNKIKAS CCCEEECHHHHCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEECEEEEECCCCEEEE LTPTGDSARVKIDGESFTINNGETVDVEIENKNKLAPYLTVGYRPNINQNWGLFGELGAA ECCCCCCCEEEECCCEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHH YMGKMKADVKSSAGDVALEEAAKKEIEDDNIWYPIVKAGVTYRF HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA