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The map label for this gene is lolA [H]

Identifier: 148652700

GI number: 148652700

Start: 1061779

End: 1062495

Strand: Direct

Name: lolA [H]

Synonym: PsycPRwf_0893

Alternate gene names: 148652700

Gene position: 1061779-1062495 (Clockwise)

Preceding gene: 148652699

Following gene: 148652701

Centisome position: 35.64

GC content: 43.1

Gene sequence:

>717_bases
ATGCAAAATTCAGTGAATCCTAAAAACAAAACAACAAAAATGATGAAAAATATTATGGGCACCGCGTTATCAGGTGCACT
TATCTTTGGCATGCCGATGATGGCAGTGTCACAAGCAGCACAGGCGGCGACAGCAGCGGATAACTTAACTGCAGCCAAGC
GTTTAAACGCGCTATTGGCTAATACTAAGAGCATGACGGCAAACTTCACTCAGACCACTAAAGGTGCCAATGGCGGCAAA
AGTGGCCTCAGTGCAAAAAATGGTACTTTTTCAGGTAATATGAGTCTGCAACGCCCAAATAAATTCCGCTGGAACATCAC
CTCACCGTTTGAACAGCAAATCGTGACCGATGGTAGTGCCATGTGGGTATATGATAAGGACTTACAGCAAGCGACCCGTC
AAAATGCCGATCAGCAATTGGGTAATACCCCAGCTTTACTGCTATCAGGCGACCCAAGTAAAATTGCCAGCAATTTTAAA
ATCACTCAGCCTGATGCCAAAAAGAACTATTATGTCCTTTATCCAAAAGCCAGCGGCAGTAACTTTAACAGTCTAGCGGT
GAGCTTCAATGGTGGCAAACCCATTATGATGGTACTTAATGACTCTTTGGGCCAAGTGACCTCTATTAAATTTAGCAATG
TAAAAGTTAACCCAAGCATTAATAGCAGCCAGTTTAAGTTTACGCCGCCTAAAGGTGTCGACATTATTAATCAGTAA

Upstream 100 bases:

>100_bases
CTTGTATATAAGCTATCAATATAATAAAGACGGTGGTGATTTAACGTTGCTACGGTCATTACTTAACCCTTGCTTTAATT
TTTGAAGGATAATTTACAAC

Downstream 100 bases:

>100_bases
GGGAGTCGAAGAGACTCAGACAGTAGGCTGCTCATAGATCATTGGCGTTTCTTACAGTCTGTTATTGATGACCTAATATT
TTAAGTCTACTTTTTTAAGT

Product: outer membrane lipoprotein carrier protein LolA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MQNSVNPKNKTTKMMKNIMGTALSGALIFGMPMMAVSQAAQAATAADNLTAAKRLNALLANTKSMTANFTQTTKGANGGK
SGLSAKNGTFSGNMSLQRPNKFRWNITSPFEQQIVTDGSAMWVYDKDLQQATRQNADQQLGNTPALLLSGDPSKIASNFK
ITQPDAKKNYYVLYPKASGSNFNSLAVSFNGGKPIMMVLNDSLGQVTSIKFSNVKVNPSINSSQFKFTPPKGVDIINQ

Sequences:

>Translated_238_residues
MQNSVNPKNKTTKMMKNIMGTALSGALIFGMPMMAVSQAAQAATAADNLTAAKRLNALLANTKSMTANFTQTTKGANGGK
SGLSAKNGTFSGNMSLQRPNKFRWNITSPFEQQIVTDGSAMWVYDKDLQQATRQNADQQLGNTPALLLSGDPSKIASNFK
ITQPDAKKNYYVLYPKASGSNFNSLAVSFNGGKPIMMVLNDSLGQVTSIKFSNVKVNPSINSSQFKFTPPKGVDIINQ
>Mature_238_residues
MQNSVNPKNKTTKMMKNIMGTALSGALIFGMPMMAVSQAAQAATAADNLTAAKRLNALLANTKSMTANFTQTTKGANGGK
SGLSAKNGTFSGNMSLQRPNKFRWNITSPFEQQIVTDGSAMWVYDKDLQQATRQNADQQLGNTPALLLSGDPSKIASNFK
ITQPDAKKNYYVLYPKASGSNFNSLAVSFNGGKPIMMVLNDSLGQVTSIKFSNVKVNPSINSSQFKFTPPKGVDIINQ

Specific function: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the l

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolA family [H]

Homologues:

Organism=Escherichia coli, GI145693108, Length=213, Percent_Identity=30.0469483568075, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564
- InterPro:   IPR018323 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 25543; Mature: 25543

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNSVNPKNKTTKMMKNIMGTALSGALIFGMPMMAVSQAAQAATAADNLTAAKRLNALLA
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTKSMTANFTQTTKGANGGKSGLSAKNGTFSGNMSLQRPNKFRWNITSPFEQQIVTDGSA
CCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHCCCCE
MWVYDKDLQQATRQNADQQLGNTPALLLSGDPSKIASNFKITQPDAKKNYYVLYPKASGS
EEEECHHHHHHHHCCHHHHHCCCCEEEEECCHHHHHCCCEEECCCCCCCEEEEEECCCCC
NFNSLAVSFNGGKPIMMVLNDSLGQVTSIKFSNVKVNPSINSSQFKFTPPKGVDIINQ
CCCEEEEEECCCCEEEEEEECCCCCEEEEEECCEEECCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MQNSVNPKNKTTKMMKNIMGTALSGALIFGMPMMAVSQAAQAATAADNLTAAKRLNALLA
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTKSMTANFTQTTKGANGGKSGLSAKNGTFSGNMSLQRPNKFRWNITSPFEQQIVTDGSA
CCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHCCCCE
MWVYDKDLQQATRQNADQQLGNTPALLLSGDPSKIASNFKITQPDAKKNYYVLYPKASGS
EEEECHHHHHHHHCCHHHHHCCCCEEEEECCHHHHHCCCEEECCCCCCCEEEEEECCCCC
NFNSLAVSFNGGKPIMMVLNDSLGQVTSIKFSNVKVNPSINSSQFKFTPPKGVDIINQ
CCCEEEEEECCCCEEEEEEECCCCCEEEEEECCEEECCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA