| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is aprE [H]
Identifier: 148652570
GI number: 148652570
Start: 909480
End: 910649
Strand: Direct
Name: aprE [H]
Synonym: PsycPRwf_0761
Alternate gene names: 148652570
Gene position: 909480-910649 (Clockwise)
Preceding gene: 148652569
Following gene: 148652571
Centisome position: 30.53
GC content: 45.73
Gene sequence:
>1170_bases ATGTCTGATTATCAATATACCCCCACTAAGCCCAAAGTTGGCGGTGCTCGCCTTAGTATCTGGATTGCCTTGATTGGTAT CACGGTGTTATTGGTATGGGCTTATTTTGCAAAAATTGACCAAGTTACCCGTGCAAAGGCCACAGTAATAGCCAGTGCCC GTACTCAGGAGGTTCAAGCTTCAGATGGTGGCGTGTTAACTCAGATTTTGGTATCAGAAGGCGATGATGTCAAAAAAGGT CAGCTGCTTGTGGTATTAGAAGAGGAGCGTGCACAAGCCGCCTTTGACAGCTCAGCCTCTAAATCTGCAGCTTTAGAGGC TCAGTTAGCCCGCTTAAATGCTGAAATTTTTGATCGGCCTTTGAGATTTCCAGACAATGTACGCAAATACCCAGAATATG TAGAGAACCAAACTCAACTTTATAATCGTCGCAGACAGGCCATCAATGAAGAGGTTTCTTCCTTAGAGGATATGCTGGTG CTGGCACAAAAAGAGCTGGATATGAATGAGCCGTTATTGGCTTATGGAGACGTCAGTCAGGCAGATGTTATTAAGCTGCG TCGTCAAGTTGCTGATATTAAGGCACAAATTAATAACAAGCGTAACAAATACTTCGAAGATGCTCAGGCCGAAATGACCA AAGCGCAAGAAGATTTAGATGCAGAGCTAGAGCAGTTACGAGATCGCAGTCAAGTGCTACAAGAGAAGCGCCTGCTATCG CCTCAAGATGGTAAGGTGAATAATATTAACATCACCACCATCGGTGGTGTGGTTAAGCCAGGTGAGGTGATTATGGAGCT GCTCCCTACCAGTAGCGACTTGATTGTAGAGGCAAAGGTTAGCCCCGCAGATATCGCTTATGTTCAAGAAGGGCAGGTAG CTTCAGTAAAACTTGATGCCTATGACTTCTCAATCTTCGGGGCCATGCGTGGTACGGTTACCTATATTAGCCCAGATACC TTGCTAGAAAAAACCCCAAAAGGTGATGAGCCTTATTACCGAGTGCTGATTAAGATTGGTAAAGCTGAGTTTGCTGGCCG CGGCGATGAGATTGTCATCAAGCCCGGTATGACCGCCAGTGTGGATATAAAGGCCATGGAGCGCAGTGTATTGTCATACT TAACCAAACCCATTACCAAAACCTTATCTGAGGGGTTAGGTGAGCGCTAA
Upstream 100 bases:
>100_bases CATCACAGGTCAACCAAGCTGGCGCTGAAGACCAAAGAGCGGCATCAACAGCTGTTAAAAGTAGTATTGTCATTAACCCA AAATCTGAAGAGAAGTAGGC
Downstream 100 bases:
>100_bases CCACCGCTTAGAGTTTCTGATTGTACTTGCTCATCTACGGTATCGTATCTGCGATGCAGGCAGGTGAGTGAGTAGCATAA GAGGCGTGGACAAAGTTATT
Product: HlyD family type I secretion membrane fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSDYQYTPTKPKVGGARLSIWIALIGITVLLVWAYFAKIDQVTRAKATVIASARTQEVQASDGGVLTQILVSEGDDVKKG QLLVVLEEERAQAAFDSSASKSAALEAQLARLNAEIFDRPLRFPDNVRKYPEYVENQTQLYNRRRQAINEEVSSLEDMLV LAQKELDMNEPLLAYGDVSQADVIKLRRQVADIKAQINNKRNKYFEDAQAEMTKAQEDLDAELEQLRDRSQVLQEKRLLS PQDGKVNNINITTIGGVVKPGEVIMELLPTSSDLIVEAKVSPADIAYVQEGQVASVKLDAYDFSIFGAMRGTVTYISPDT LLEKTPKGDEPYYRVLIKIGKAEFAGRGDEIVIKPGMTASVDIKAMERSVLSYLTKPITKTLSEGLGER
Sequences:
>Translated_389_residues MSDYQYTPTKPKVGGARLSIWIALIGITVLLVWAYFAKIDQVTRAKATVIASARTQEVQASDGGVLTQILVSEGDDVKKG QLLVVLEEERAQAAFDSSASKSAALEAQLARLNAEIFDRPLRFPDNVRKYPEYVENQTQLYNRRRQAINEEVSSLEDMLV LAQKELDMNEPLLAYGDVSQADVIKLRRQVADIKAQINNKRNKYFEDAQAEMTKAQEDLDAELEQLRDRSQVLQEKRLLS PQDGKVNNINITTIGGVVKPGEVIMELLPTSSDLIVEAKVSPADIAYVQEGQVASVKLDAYDFSIFGAMRGTVTYISPDT LLEKTPKGDEPYYRVLIKIGKAEFAGRGDEIVIKPGMTASVDIKAMERSVLSYLTKPITKTLSEGLGER >Mature_388_residues SDYQYTPTKPKVGGARLSIWIALIGITVLLVWAYFAKIDQVTRAKATVIASARTQEVQASDGGVLTQILVSEGDDVKKGQ LLVVLEEERAQAAFDSSASKSAALEAQLARLNAEIFDRPLRFPDNVRKYPEYVENQTQLYNRRRQAINEEVSSLEDMLVL AQKELDMNEPLLAYGDVSQADVIKLRRQVADIKAQINNKRNKYFEDAQAEMTKAQEDLDAELEQLRDRSQVLQEKRLLSP QDGKVNNINITTIGGVVKPGEVIMELLPTSSDLIVEAKVSPADIAYVQEGQVASVKLDAYDFSIFGAMRGTVTYISPDTL LEKTPKGDEPYYRVLIKIGKAEFAGRGDEIVIKPGMTASVDIKAMERSVLSYLTKPITKTLSEGLGER
Specific function: Involved in the secretion of alkaline protease [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 43149; Mature: 43018
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYQYTPTKPKVGGARLSIWIALIGITVLLVWAYFAKIDQVTRAKATVIASARTQEVQA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCC SDGGVLTQILVSEGDDVKKGQLLVVLEEERAQAAFDSSASKSAALEAQLARLNAEIFDRP CCCCCEEHHHHCCCCCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC LRFPDNVRKYPEYVENQTQLYNRRRQAINEEVSSLEDMLVLAQKELDMNEPLLAYGDVSQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCH ADVIKLRRQVADIKAQINNKRNKYFEDAQAEMTKAQEDLDAELEQLRDRSQVLQEKRLLS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PQDGKVNNINITTIGGVVKPGEVIMELLPTSSDLIVEAKVSPADIAYVQEGQVASVKLDA CCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEEEC YDFSIFGAMRGTVTYISPDTLLEKTPKGDEPYYRVLIKIGKAEFAGRGDEIVIKPGMTAS CCEEEEHHCCCEEEEECCHHHHHCCCCCCCHHHHHHHHCCCHHHCCCCCEEEECCCCCCE VDIKAMERSVLSYLTKPITKTLSEGLGER EHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDYQYTPTKPKVGGARLSIWIALIGITVLLVWAYFAKIDQVTRAKATVIASARTQEVQA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCC SDGGVLTQILVSEGDDVKKGQLLVVLEEERAQAAFDSSASKSAALEAQLARLNAEIFDRP CCCCCEEHHHHCCCCCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC LRFPDNVRKYPEYVENQTQLYNRRRQAINEEVSSLEDMLVLAQKELDMNEPLLAYGDVSQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCH ADVIKLRRQVADIKAQINNKRNKYFEDAQAEMTKAQEDLDAELEQLRDRSQVLQEKRLLS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PQDGKVNNINITTIGGVVKPGEVIMELLPTSSDLIVEAKVSPADIAYVQEGQVASVKLDA CCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEEEC YDFSIFGAMRGTVTYISPDTLLEKTPKGDEPYYRVLIKIGKAEFAGRGDEIVIKPGMTAS CCEEEEHHCCCEEEEECCHHHHHCCCCCCCHHHHHHHHCCCHHHCCCCCEEEECCCCCCE VDIKAMERSVLSYLTKPITKTLSEGLGER EHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1427098; 10984043 [H]