Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148652568

Identifier: 148652568

GI number: 148652568

Start: 905215

End: 906819

Strand: Direct

Name: 148652568

Synonym: PsycPRwf_0759

Alternate gene names: NA

Gene position: 905215-906819 (Clockwise)

Preceding gene: 148652567

Following gene: 148652569

Centisome position: 30.39

GC content: 46.85

Gene sequence:

>1605_bases
ATGATGTTCAGTCCGCATAAATACAAAAAAAAATTGTTGGTCGCCTTGTTATTAGTCACCGGATCAAGCTGGTCAGCTCA
TGCCAATACGGTCATCACGGATGTTCAAATTAACTCATTAATTGCTCAAGCTATTGAGACCCACCCTTTGGTAGGATCAG
CTCGAGCTGAGCAGCAGGCGACCCTCGAAGGTATTAATGCCGCCAAGCTTAACCTGCTACCCACACCCAGCTTCTCAACG
GGTTACAATACCGATGATGATTTGGTCTCTGAAGTGGGTATTCGCCAGCCACTATGGACCGGGGGGCGCTTAACTGCCAA
CGTTAACCAAGCAATTTTTGATGACAAAGCGGCAGTTGAAAATATTTATGAGCAGCAAAACCAAGTGGCCAAAACCACCA
TTGAGGCTTGGCAAACTTACATTAATGCAGTGGCCCAGCAGCGTGTCTATCTCCAAAATATCACCCAATTACGTAATTTT
GAGGCGATGATGCAGCGCCGAGTCAATCAAGGGGTCTCAGCGCGTATTGAACTTGACTTAGTCACCAACCGTATTTTGCA
AGAAACCAATGCCTATGAAGCCGCGCAGGAACAGCAGCGTATTGCAGAGGCGCGCCTACAGCAGATTACAGGTCATCCCC
TGCCACCTGGCAGTGAGCACAGCATTCCACCGCTTAACACCTTGGTTGAGCAGGCCAAAGCGGCCTCGGCAGGCTTTGAA
AAAATGGCATTTAATGATGCCAGCTTCTACAACCCATCCGTGGTAAAAGAAATCTTCCAGATTGAGTCGGCCAAACAAGA
GGTTAAGGCACAAAACGCCTCAAAATACCCGACCGTGTATGCCGAATATAAGCACACTTATGATTATGATAACAAAGAGG
ATGATGGGCAGTTTTATGTGGGCTTAAACTATCAGCCTGGAGCCGGGTTTTCAAACTTTGCCTTAACGCGCGCCTCTGAA
GCACGTGTAAATAGCTTGGTACAAAATAAAGAAGCCGCGCAGCGTAATGTGATGGAAAATATCCAAGTACAGTATCAGCA
GTTTGCCAGTGCACGGAGCCGTGAGTTGTCTTTGGTATCGGCAGTAGCGGGTGCCCAAATTGTACTTGATTCCTACCAGC
GCCAGTTTATCGCCGGTCGAAAATCCTGGCTTGAGGTCCTAAATGCTGTGCGTGAACTCAGTGATTATCAGATTCGCTTA
GTCCAGACCCGATCAGATATTCTGGGTGCATTTTATAAGCTACAAGTGGATTTTAGCTTGATGCCTTGGCAGACTTTTGC
CAAAAATCGTCAACCGGTAAAAATGTTTAAAGTCAGCGATCCGGTTAAAGACTGGATGAACACTCAAAACATCACTACCC
CACAGTCCCAAAAATTCGGCTACGGTCAACCGACAGTGGTTAATGCCGGCCAGCCCGATGAGTATATTCAAATTACCTTG
CCGGCTGATGCTCAGCATCAACTCAATCAAGGTGGCTATATTGTACTCAATGACAGTCGTTTATTAGATGAGCCTACGTT
CACTGATAAAACCGTGCAAAATGACCCAAGTCCGCCGGATTCAATGAGGGTAGATACCGACTCTAATGCCAACTCCGGCA
ATTAA

Upstream 100 bases:

>100_bases
AATAAGTAGGGCTTAAGAGTCAGGGCTTATTACGCGACAGTTTTATCCTAAGCATGCCCGCTTGCATCGCTTTATCTTCC
AACCAATAAGTTAATACACT

Downstream 100 bases:

>100_bases
CAGCAATGTCTGCTCGCATTTTTTAAGATAATAATTTTTTTATAAGTGGTCATTATGAGTACTAATCAAAATCCAGAAAA
CAATCTAGGCCCCAAAAGCT

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Protein; OMF Family Outer Membrane Efflux Protein

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MMFSPHKYKKKLLVALLLVTGSSWSAHANTVITDVQINSLIAQAIETHPLVGSARAEQQATLEGINAAKLNLLPTPSFST
GYNTDDDLVSEVGIRQPLWTGGRLTANVNQAIFDDKAAVENIYEQQNQVAKTTIEAWQTYINAVAQQRVYLQNITQLRNF
EAMMQRRVNQGVSARIELDLVTNRILQETNAYEAAQEQQRIAEARLQQITGHPLPPGSEHSIPPLNTLVEQAKAASAGFE
KMAFNDASFYNPSVVKEIFQIESAKQEVKAQNASKYPTVYAEYKHTYDYDNKEDDGQFYVGLNYQPGAGFSNFALTRASE
ARVNSLVQNKEAAQRNVMENIQVQYQQFASARSRELSLVSAVAGAQIVLDSYQRQFIAGRKSWLEVLNAVRELSDYQIRL
VQTRSDILGAFYKLQVDFSLMPWQTFAKNRQPVKMFKVSDPVKDWMNTQNITTPQSQKFGYGQPTVVNAGQPDEYIQITL
PADAQHQLNQGGYIVLNDSRLLDEPTFTDKTVQNDPSPPDSMRVDTDSNANSGN

Sequences:

>Translated_534_residues
MMFSPHKYKKKLLVALLLVTGSSWSAHANTVITDVQINSLIAQAIETHPLVGSARAEQQATLEGINAAKLNLLPTPSFST
GYNTDDDLVSEVGIRQPLWTGGRLTANVNQAIFDDKAAVENIYEQQNQVAKTTIEAWQTYINAVAQQRVYLQNITQLRNF
EAMMQRRVNQGVSARIELDLVTNRILQETNAYEAAQEQQRIAEARLQQITGHPLPPGSEHSIPPLNTLVEQAKAASAGFE
KMAFNDASFYNPSVVKEIFQIESAKQEVKAQNASKYPTVYAEYKHTYDYDNKEDDGQFYVGLNYQPGAGFSNFALTRASE
ARVNSLVQNKEAAQRNVMENIQVQYQQFASARSRELSLVSAVAGAQIVLDSYQRQFIAGRKSWLEVLNAVRELSDYQIRL
VQTRSDILGAFYKLQVDFSLMPWQTFAKNRQPVKMFKVSDPVKDWMNTQNITTPQSQKFGYGQPTVVNAGQPDEYIQITL
PADAQHQLNQGGYIVLNDSRLLDEPTFTDKTVQNDPSPPDSMRVDTDSNANSGN
>Mature_534_residues
MMFSPHKYKKKLLVALLLVTGSSWSAHANTVITDVQINSLIAQAIETHPLVGSARAEQQATLEGINAAKLNLLPTPSFST
GYNTDDDLVSEVGIRQPLWTGGRLTANVNQAIFDDKAAVENIYEQQNQVAKTTIEAWQTYINAVAQQRVYLQNITQLRNF
EAMMQRRVNQGVSARIELDLVTNRILQETNAYEAAQEQQRIAEARLQQITGHPLPPGSEHSIPPLNTLVEQAKAASAGFE
KMAFNDASFYNPSVVKEIFQIESAKQEVKAQNASKYPTVYAEYKHTYDYDNKEDDGQFYVGLNYQPGAGFSNFALTRASE
ARVNSLVQNKEAAQRNVMENIQVQYQQFASARSRELSLVSAVAGAQIVLDSYQRQFIAGRKSWLEVLNAVRELSDYQIRL
VQTRSDILGAFYKLQVDFSLMPWQTFAKNRQPVKMFKVSDPVKDWMNTQNITTPQSQKFGYGQPTVVNAGQPDEYIQITL
PADAQHQLNQGGYIVLNDSRLLDEPTFTDKTVQNDPSPPDSMRVDTDSNANSGN

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59761; Mature: 59761

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFSPHKYKKKLLVALLLVTGSSWSAHANTVITDVQINSLIAQAIETHPLVGSARAEQQA
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHH
TLEGINAAKLNLLPTPSFSTGYNTDDDLVSEVGIRQPLWTGGRLTANVNQAIFDDKAAVE
HHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCHHHHHCCHHHHH
NIYEQQNQVAKTTIEAWQTYINAVAQQRVYLQNITQLRNFEAMMQRRVNQGVSARIELDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
VTNRILQETNAYEAAQEQQRIAEARLQQITGHPLPPGSEHSIPPLNTLVEQAKAASAGFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH
KMAFNDASFYNPSVVKEIFQIESAKQEVKAQNASKYPTVYAEYKHTYDYDNKEDDGQFYV
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEE
GLNYQPGAGFSNFALTRASEARVNSLVQNKEAAQRNVMENIQVQYQQFASARSRELSLVS
EEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAGAQIVLDSYQRQFIAGRKSWLEVLNAVRELSDYQIRLVQTRSDILGAFYKLQVDFSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHEEEEEEEEE
MPWQTFAKNRQPVKMFKVSDPVKDWMNTQNITTPQSQKFGYGQPTVVNAGQPDEYIQITL
CCHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEE
PADAQHQLNQGGYIVLNDSRLLDEPTFTDKTVQNDPSPPDSMRVDTDSNANSGN
CCCCHHHHCCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MMFSPHKYKKKLLVALLLVTGSSWSAHANTVITDVQINSLIAQAIETHPLVGSARAEQQA
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHH
TLEGINAAKLNLLPTPSFSTGYNTDDDLVSEVGIRQPLWTGGRLTANVNQAIFDDKAAVE
HHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCHHHHHCCHHHHH
NIYEQQNQVAKTTIEAWQTYINAVAQQRVYLQNITQLRNFEAMMQRRVNQGVSARIELDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
VTNRILQETNAYEAAQEQQRIAEARLQQITGHPLPPGSEHSIPPLNTLVEQAKAASAGFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH
KMAFNDASFYNPSVVKEIFQIESAKQEVKAQNASKYPTVYAEYKHTYDYDNKEDDGQFYV
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEE
GLNYQPGAGFSNFALTRASEARVNSLVQNKEAAQRNVMENIQVQYQQFASARSRELSLVS
EEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAGAQIVLDSYQRQFIAGRKSWLEVLNAVRELSDYQIRLVQTRSDILGAFYKLQVDFSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHEEEEEEEEE
MPWQTFAKNRQPVKMFKVSDPVKDWMNTQNITTPQSQKFGYGQPTVVNAGQPDEYIQITL
CCHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEE
PADAQHQLNQGGYIVLNDSRLLDEPTFTDKTVQNDPSPPDSMRVDTDSNANSGN
CCCCHHHHCCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA